Protein–RNA interactions for Protein: A0A140T8M0

Igkv1-117, Immunoglobulin kappa variable 1-117 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-117A0A140T8M0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Igkv1-117A0A140T8M0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Igkv1-117A0A140T8M0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Igkv1-117A0A140T8M0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Igkv1-117A0A140T8M0 Psd-208ENSMUST00000224556 2034 ntBASIC21.49■■□□□ 1.03
Igkv1-117A0A140T8M0 Gm25239-201ENSMUST00000174915 86 ntBASIC21.32■■□□□ 1
Igkv1-117A0A140T8M0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Igkv1-117A0A140T8M0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv1-117A0A140T8M0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Igkv1-117A0A140T8M0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Igkv1-117A0A140T8M0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Igkv1-117A0A140T8M0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Igkv1-117A0A140T8M0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv1-117A0A140T8M0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv1-117A0A140T8M0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv1-117A0A140T8M0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv1-117A0A140T8M0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Igkv1-117A0A140T8M0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Igkv1-117A0A140T8M0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.88■□□□□ 0.77
Igkv1-117A0A140T8M0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Igkv1-117A0A140T8M0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Igkv1-117A0A140T8M0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv1-117A0A140T8M0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv1-117A0A140T8M0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv1-117A0A140T8M0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Igkv1-117A0A140T8M0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.5■□□□□ 0.71
Igkv1-117A0A140T8M0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.43■□□□□ 0.7
Igkv1-117A0A140T8M0 Gm15042-201ENSMUST00000120212 883 ntBASIC19.43■□□□□ 0.7
Igkv1-117A0A140T8M0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv1-117A0A140T8M0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv1-117A0A140T8M0 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.39■□□□□ 0.69
Igkv1-117A0A140T8M0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv1-117A0A140T8M0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Igkv1-117A0A140T8M0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Igkv1-117A0A140T8M0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Igkv1-117A0A140T8M0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Igkv1-117A0A140T8M0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv1-117A0A140T8M0 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.2■□□□□ 0.66
Igkv1-117A0A140T8M0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.19■□□□□ 0.66
Igkv1-117A0A140T8M0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv1-117A0A140T8M0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.17■□□□□ 0.66
Igkv1-117A0A140T8M0 Gm15045-201ENSMUST00000117359 883 ntBASIC19.15■□□□□ 0.66
Igkv1-117A0A140T8M0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv1-117A0A140T8M0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv1-117A0A140T8M0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv1-117A0A140T8M0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv1-117A0A140T8M0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Igkv1-117A0A140T8M0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Igkv1-117A0A140T8M0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Igkv1-117A0A140T8M0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Igkv1-117A0A140T8M0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Igkv1-117A0A140T8M0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Igkv1-117A0A140T8M0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.85■□□□□ 0.61
Igkv1-117A0A140T8M0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv1-117A0A140T8M0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv1-117A0A140T8M0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv1-117A0A140T8M0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Igkv1-117A0A140T8M0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Igkv1-117A0A140T8M0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Igkv1-117A0A140T8M0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv1-117A0A140T8M0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Igkv1-117A0A140T8M0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Igkv1-117A0A140T8M0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv1-117A0A140T8M0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv1-117A0A140T8M0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Igkv1-117A0A140T8M0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv1-117A0A140T8M0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Igkv1-117A0A140T8M0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Igkv1-117A0A140T8M0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Igkv1-117A0A140T8M0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.52■□□□□ 0.56
Igkv1-117A0A140T8M0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Igkv1-117A0A140T8M0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv1-117A0A140T8M0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv1-117A0A140T8M0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Igkv1-117A0A140T8M0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv1-117A0A140T8M0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Igkv1-117A0A140T8M0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv1-117A0A140T8M0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.34■□□□□ 0.53
Igkv1-117A0A140T8M0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv1-117A0A140T8M0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv1-117A0A140T8M0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv1-117A0A140T8M0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.26■□□□□ 0.51
Igkv1-117A0A140T8M0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Igkv1-117A0A140T8M0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv1-117A0A140T8M0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Igkv1-117A0A140T8M0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv1-117A0A140T8M0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv1-117A0A140T8M0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv1-117A0A140T8M0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv1-117A0A140T8M0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv1-117A0A140T8M0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.17■□□□□ 0.5
Igkv1-117A0A140T8M0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igkv1-117A0A140T8M0 Gm24109-201ENSMUST00000175489 103 ntBASIC18.15■□□□□ 0.5
Igkv1-117A0A140T8M0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv1-117A0A140T8M0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igkv1-117A0A140T8M0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igkv1-117A0A140T8M0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igkv1-117A0A140T8M0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv1-117A0A140T8M0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv1-117A0A140T8M0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms