Protein–RNA interactions for Protein: A0A0G2JF94

Trav14-1, T cell receptor alpha variable 14-1 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14-1A0A0G2JF94 Gm25239-201ENSMUST00000174915 86 ntBASIC23.13■■□□□ 1.29
Trav14-1A0A0G2JF94 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trav14-1A0A0G2JF94 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trav14-1A0A0G2JF94 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Trav14-1A0A0G2JF94 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trav14-1A0A0G2JF94 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav14-1A0A0G2JF94 Psd-208ENSMUST00000224556 2034 ntBASIC20.92■□□□□ 0.94
Trav14-1A0A0G2JF94 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav14-1A0A0G2JF94 Gm15042-201ENSMUST00000120212 883 ntBASIC20.75■□□□□ 0.91
Trav14-1A0A0G2JF94 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav14-1A0A0G2JF94 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav14-1A0A0G2JF94 Gm15045-201ENSMUST00000117359 883 ntBASIC20.32■□□□□ 0.84
Trav14-1A0A0G2JF94 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.26■□□□□ 0.83
Trav14-1A0A0G2JF94 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav14-1A0A0G2JF94 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav14-1A0A0G2JF94 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav14-1A0A0G2JF94 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav14-1A0A0G2JF94 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Trav14-1A0A0G2JF94 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav14-1A0A0G2JF94 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav14-1A0A0G2JF94 Gm24109-201ENSMUST00000175489 103 ntBASIC19.78■□□□□ 0.76
Trav14-1A0A0G2JF94 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav14-1A0A0G2JF94 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav14-1A0A0G2JF94 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav14-1A0A0G2JF94 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav14-1A0A0G2JF94 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav14-1A0A0G2JF94 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.69■□□□□ 0.74
Trav14-1A0A0G2JF94 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav14-1A0A0G2JF94 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.57■□□□□ 0.72
Trav14-1A0A0G2JF94 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav14-1A0A0G2JF94 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav14-1A0A0G2JF94 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav14-1A0A0G2JF94 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav14-1A0A0G2JF94 Gm23366-201ENSMUST00000175022 89 ntBASIC19.45■□□□□ 0.7
Trav14-1A0A0G2JF94 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav14-1A0A0G2JF94 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav14-1A0A0G2JF94 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav14-1A0A0G2JF94 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav14-1A0A0G2JF94 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav14-1A0A0G2JF94 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Trav14-1A0A0G2JF94 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav14-1A0A0G2JF94 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.26■□□□□ 0.67
Trav14-1A0A0G2JF94 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trav14-1A0A0G2JF94 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.22■□□□□ 0.67
Trav14-1A0A0G2JF94 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.19■□□□□ 0.66
Trav14-1A0A0G2JF94 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav14-1A0A0G2JF94 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trav14-1A0A0G2JF94 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav14-1A0A0G2JF94 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trav14-1A0A0G2JF94 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.03■□□□□ 0.64
Trav14-1A0A0G2JF94 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav14-1A0A0G2JF94 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav14-1A0A0G2JF94 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav14-1A0A0G2JF94 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav14-1A0A0G2JF94 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.69■□□□□ 0.58
Trav14-1A0A0G2JF94 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav14-1A0A0G2JF94 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.66■□□□□ 0.58
Trav14-1A0A0G2JF94 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trav14-1A0A0G2JF94 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav14-1A0A0G2JF94 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav14-1A0A0G2JF94 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav14-1A0A0G2JF94 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav14-1A0A0G2JF94 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav14-1A0A0G2JF94 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trav14-1A0A0G2JF94 Gm42596-201ENSMUST00000196305 1958 ntBASIC18.53■□□□□ 0.56
Trav14-1A0A0G2JF94 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trav14-1A0A0G2JF94 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Trav14-1A0A0G2JF94 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav14-1A0A0G2JF94 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav14-1A0A0G2JF94 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav14-1A0A0G2JF94 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav14-1A0A0G2JF94 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav14-1A0A0G2JF94 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trav14-1A0A0G2JF94 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav14-1A0A0G2JF94 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC18.35■□□□□ 0.53
Trav14-1A0A0G2JF94 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav14-1A0A0G2JF94 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav14-1A0A0G2JF94 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav14-1A0A0G2JF94 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav14-1A0A0G2JF94 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav14-1A0A0G2JF94 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav14-1A0A0G2JF94 Gm27325-201ENSMUST00000175467 74 ntBASIC18.26■□□□□ 0.51
Trav14-1A0A0G2JF94 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav14-1A0A0G2JF94 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC18.24■□□□□ 0.51
Trav14-1A0A0G2JF94 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav14-1A0A0G2JF94 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav14-1A0A0G2JF94 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav14-1A0A0G2JF94 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav14-1A0A0G2JF94 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav14-1A0A0G2JF94 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav14-1A0A0G2JF94 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav14-1A0A0G2JF94 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.08■□□□□ 0.48
Trav14-1A0A0G2JF94 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav14-1A0A0G2JF94 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav14-1A0A0G2JF94 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav14-1A0A0G2JF94 Gm25238-201ENSMUST00000174914 89 ntBASIC18.05■□□□□ 0.48
Trav14-1A0A0G2JF94 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav14-1A0A0G2JF94 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trav14-1A0A0G2JF94 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav14-1A0A0G2JF94 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms