Protein–RNA interactions for Protein: Q9D6B9

Hrct1, Histidine-rich carboxyl terminus protein 1, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hrct1Q9D6B9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Hrct1Q9D6B9 Gm25239-201ENSMUST00000174915 86 ntBASIC23.53■■□□□ 1.36
Hrct1Q9D6B9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Hrct1Q9D6B9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Hrct1Q9D6B9 Psd-208ENSMUST00000224556 2034 ntBASIC21.91■■□□□ 1.1
Hrct1Q9D6B9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hrct1Q9D6B9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Hrct1Q9D6B9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Hrct1Q9D6B9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Hrct1Q9D6B9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hrct1Q9D6B9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Hrct1Q9D6B9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hrct1Q9D6B9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hrct1Q9D6B9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hrct1Q9D6B9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Hrct1Q9D6B9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hrct1Q9D6B9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hrct1Q9D6B9 Gm15042-201ENSMUST00000120212 883 ntBASIC21.02■□□□□ 0.96
Hrct1Q9D6B9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hrct1Q9D6B9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hrct1Q9D6B9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Hrct1Q9D6B9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hrct1Q9D6B9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hrct1Q9D6B9 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.6■□□□□ 0.89
Hrct1Q9D6B9 Gm15045-201ENSMUST00000117359 883 ntBASIC20.58■□□□□ 0.89
Hrct1Q9D6B9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Hrct1Q9D6B9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hrct1Q9D6B9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hrct1Q9D6B9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hrct1Q9D6B9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.41■□□□□ 0.86
Hrct1Q9D6B9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hrct1Q9D6B9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Hrct1Q9D6B9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hrct1Q9D6B9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hrct1Q9D6B9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hrct1Q9D6B9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hrct1Q9D6B9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hrct1Q9D6B9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hrct1Q9D6B9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.17■□□□□ 0.82
Hrct1Q9D6B9 Gm24109-201ENSMUST00000175489 103 ntBASIC20.15■□□□□ 0.82
Hrct1Q9D6B9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hrct1Q9D6B9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hrct1Q9D6B9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hrct1Q9D6B9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hrct1Q9D6B9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hrct1Q9D6B9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hrct1Q9D6B9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hrct1Q9D6B9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hrct1Q9D6B9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.88■□□□□ 0.77
Hrct1Q9D6B9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.83■□□□□ 0.77
Hrct1Q9D6B9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hrct1Q9D6B9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.81■□□□□ 0.76
Hrct1Q9D6B9 Zxda-201ENSMUST00000117281 2621 ntBASIC19.8■□□□□ 0.76
Hrct1Q9D6B9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hrct1Q9D6B9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hrct1Q9D6B9 Gm23366-201ENSMUST00000175022 89 ntBASIC19.73■□□□□ 0.75
Hrct1Q9D6B9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hrct1Q9D6B9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hrct1Q9D6B9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.67■□□□□ 0.74
Hrct1Q9D6B9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hrct1Q9D6B9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Hrct1Q9D6B9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hrct1Q9D6B9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Hrct1Q9D6B9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hrct1Q9D6B9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hrct1Q9D6B9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hrct1Q9D6B9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hrct1Q9D6B9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Hrct1Q9D6B9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hrct1Q9D6B9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hrct1Q9D6B9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hrct1Q9D6B9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hrct1Q9D6B9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hrct1Q9D6B9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hrct1Q9D6B9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hrct1Q9D6B9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.44■□□□□ 0.7
Hrct1Q9D6B9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hrct1Q9D6B9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hrct1Q9D6B9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hrct1Q9D6B9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hrct1Q9D6B9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.34■□□□□ 0.69
Hrct1Q9D6B9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.33■□□□□ 0.68
Hrct1Q9D6B9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Hrct1Q9D6B9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.28■□□□□ 0.68
Hrct1Q9D6B9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hrct1Q9D6B9 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.26■□□□□ 0.67
Hrct1Q9D6B9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Hrct1Q9D6B9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hrct1Q9D6B9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hrct1Q9D6B9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hrct1Q9D6B9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hrct1Q9D6B9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hrct1Q9D6B9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hrct1Q9D6B9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hrct1Q9D6B9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hrct1Q9D6B9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Hrct1Q9D6B9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Hrct1Q9D6B9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hrct1Q9D6B9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Hrct1Q9D6B9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms