Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Gm25239-201ENSMUST00000174915 86 ntBASIC22.99■■□□□ 1.27
C530025M09RikF6RGA8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
C530025M09RikF6RGA8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
C530025M09RikF6RGA8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
C530025M09RikF6RGA8 Psd-208ENSMUST00000224556 2034 ntBASIC21.45■■□□□ 1.02
C530025M09RikF6RGA8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C530025M09RikF6RGA8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
C530025M09RikF6RGA8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
C530025M09RikF6RGA8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
C530025M09RikF6RGA8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
C530025M09RikF6RGA8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C530025M09RikF6RGA8 Gm15042-201ENSMUST00000120212 883 ntBASIC20.64■□□□□ 0.89
C530025M09RikF6RGA8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C530025M09RikF6RGA8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C530025M09RikF6RGA8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C530025M09RikF6RGA8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
C530025M09RikF6RGA8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.44■□□□□ 0.86
C530025M09RikF6RGA8 Gm15045-201ENSMUST00000117359 883 ntBASIC20.32■□□□□ 0.84
C530025M09RikF6RGA8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
C530025M09RikF6RGA8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C530025M09RikF6RGA8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
C530025M09RikF6RGA8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
C530025M09RikF6RGA8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C530025M09RikF6RGA8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
C530025M09RikF6RGA8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C530025M09RikF6RGA8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
C530025M09RikF6RGA8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.82■□□□□ 0.76
C530025M09RikF6RGA8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
C530025M09RikF6RGA8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
C530025M09RikF6RGA8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
C530025M09RikF6RGA8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
C530025M09RikF6RGA8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
C530025M09RikF6RGA8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.7■□□□□ 0.74
C530025M09RikF6RGA8 Gm24109-201ENSMUST00000175489 103 ntBASIC19.69■□□□□ 0.74
C530025M09RikF6RGA8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
C530025M09RikF6RGA8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
C530025M09RikF6RGA8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.59■□□□□ 0.73
C530025M09RikF6RGA8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C530025M09RikF6RGA8 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.41■□□□□ 0.7
C530025M09RikF6RGA8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C530025M09RikF6RGA8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C530025M09RikF6RGA8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
C530025M09RikF6RGA8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.34■□□□□ 0.69
C530025M09RikF6RGA8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C530025M09RikF6RGA8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
C530025M09RikF6RGA8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.26■□□□□ 0.67
C530025M09RikF6RGA8 Gm23366-201ENSMUST00000175022 89 ntBASIC19.25■□□□□ 0.67
C530025M09RikF6RGA8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C530025M09RikF6RGA8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C530025M09RikF6RGA8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C530025M09RikF6RGA8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C530025M09RikF6RGA8 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.06■□□□□ 0.64
C530025M09RikF6RGA8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19■□□□□ 0.63
C530025M09RikF6RGA8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C530025M09RikF6RGA8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C530025M09RikF6RGA8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
C530025M09RikF6RGA8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C530025M09RikF6RGA8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC18.97■□□□□ 0.63
C530025M09RikF6RGA8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C530025M09RikF6RGA8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
C530025M09RikF6RGA8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
C530025M09RikF6RGA8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
C530025M09RikF6RGA8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C530025M09RikF6RGA8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.88■□□□□ 0.61
C530025M09RikF6RGA8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C530025M09RikF6RGA8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
C530025M09RikF6RGA8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C530025M09RikF6RGA8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
C530025M09RikF6RGA8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
C530025M09RikF6RGA8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C530025M09RikF6RGA8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C530025M09RikF6RGA8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C530025M09RikF6RGA8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
C530025M09RikF6RGA8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C530025M09RikF6RGA8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
C530025M09RikF6RGA8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
C530025M09RikF6RGA8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
C530025M09RikF6RGA8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C530025M09RikF6RGA8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
C530025M09RikF6RGA8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C530025M09RikF6RGA8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C530025M09RikF6RGA8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C530025M09RikF6RGA8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
C530025M09RikF6RGA8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
C530025M09RikF6RGA8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C530025M09RikF6RGA8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC18.34■□□□□ 0.53
C530025M09RikF6RGA8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C530025M09RikF6RGA8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C530025M09RikF6RGA8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
C530025M09RikF6RGA8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C530025M09RikF6RGA8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
C530025M09RikF6RGA8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C530025M09RikF6RGA8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
C530025M09RikF6RGA8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
C530025M09RikF6RGA8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
C530025M09RikF6RGA8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
C530025M09RikF6RGA8 Gm27325-201ENSMUST00000175467 74 ntBASIC18.2■□□□□ 0.5
C530025M09RikF6RGA8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
C530025M09RikF6RGA8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC18.16■□□□□ 0.5
C530025M09RikF6RGA8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms