Protein–RNA interactions for Protein: E9Q2E4

Hectd4, HECT domain E3 ubiquitin protein ligase 4, mousemouse

Predictions only

Length 4,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hectd4E9Q2E4 Gm25239-201ENSMUST00000174915 86 ntBASIC23.79■■□□□ 1.4
Hectd4E9Q2E4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Hectd4E9Q2E4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hectd4E9Q2E4 Gm24109-201ENSMUST00000175489 103 ntBASIC20.74■□□□□ 0.91
Hectd4E9Q2E4 Gm15042-201ENSMUST00000120212 883 ntBASIC20.6■□□□□ 0.89
Hectd4E9Q2E4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hectd4E9Q2E4 Gm15045-201ENSMUST00000117359 883 ntBASIC20.37■□□□□ 0.85
Hectd4E9Q2E4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hectd4E9Q2E4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hectd4E9Q2E4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hectd4E9Q2E4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hectd4E9Q2E4 Gm23366-201ENSMUST00000175022 89 ntBASIC19.62■□□□□ 0.73
Hectd4E9Q2E4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hectd4E9Q2E4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Hectd4E9Q2E4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hectd4E9Q2E4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.3■□□□□ 0.68
Hectd4E9Q2E4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.2■□□□□ 0.66
Hectd4E9Q2E4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hectd4E9Q2E4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.08■□□□□ 0.64
Hectd4E9Q2E4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Hectd4E9Q2E4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hectd4E9Q2E4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hectd4E9Q2E4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Hectd4E9Q2E4 Gm25238-201ENSMUST00000174914 89 ntBASIC18.88■□□□□ 0.61
Hectd4E9Q2E4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hectd4E9Q2E4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hectd4E9Q2E4 Psd-208ENSMUST00000224556 2034 ntBASIC18.85■□□□□ 0.61
Hectd4E9Q2E4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hectd4E9Q2E4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hectd4E9Q2E4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hectd4E9Q2E4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.75■□□□□ 0.59
Hectd4E9Q2E4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hectd4E9Q2E4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hectd4E9Q2E4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hectd4E9Q2E4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.68■□□□□ 0.58
Hectd4E9Q2E4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hectd4E9Q2E4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hectd4E9Q2E4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Hectd4E9Q2E4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hectd4E9Q2E4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.19■□□□□ 0.5
Hectd4E9Q2E4 Gm27325-201ENSMUST00000175467 74 ntBASIC18.18■□□□□ 0.5
Hectd4E9Q2E4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Hectd4E9Q2E4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.14■□□□□ 0.49
Hectd4E9Q2E4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hectd4E9Q2E4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.13■□□□□ 0.49
Hectd4E9Q2E4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hectd4E9Q2E4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hectd4E9Q2E4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hectd4E9Q2E4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hectd4E9Q2E4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hectd4E9Q2E4 Gm25262-201ENSMUST00000174934 133 ntBASIC18.03■□□□□ 0.48
Hectd4E9Q2E4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hectd4E9Q2E4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hectd4E9Q2E4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC17.95■□□□□ 0.46
Hectd4E9Q2E4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Hectd4E9Q2E4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC17.9■□□□□ 0.46
Hectd4E9Q2E4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.89■□□□□ 0.45
Hectd4E9Q2E4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC17.86■□□□□ 0.45
Hectd4E9Q2E4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.82■□□□□ 0.44
Hectd4E9Q2E4 Rab21-202ENSMUST00000218831 843 ntBASIC17.79■□□□□ 0.44
Hectd4E9Q2E4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hectd4E9Q2E4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Hectd4E9Q2E4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hectd4E9Q2E4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.74■□□□□ 0.43
Hectd4E9Q2E4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hectd4E9Q2E4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC17.69■□□□□ 0.42
Hectd4E9Q2E4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17.65■□□□□ 0.42
Hectd4E9Q2E4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hectd4E9Q2E4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hectd4E9Q2E4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hectd4E9Q2E4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Hectd4E9Q2E4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hectd4E9Q2E4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hectd4E9Q2E4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hectd4E9Q2E4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hectd4E9Q2E4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.55■□□□□ 0.4
Hectd4E9Q2E4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hectd4E9Q2E4 Gm26115-201ENSMUST00000175605 87 ntBASIC17.53■□□□□ 0.4
Hectd4E9Q2E4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.53■□□□□ 0.4
Hectd4E9Q2E4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Hectd4E9Q2E4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hectd4E9Q2E4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hectd4E9Q2E4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Hectd4E9Q2E4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hectd4E9Q2E4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hectd4E9Q2E4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hectd4E9Q2E4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hectd4E9Q2E4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hectd4E9Q2E4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hectd4E9Q2E4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.39■□□□□ 0.37
Hectd4E9Q2E4 Gm8109-201ENSMUST00000194076 746 ntBASIC17.36■□□□□ 0.37
Hectd4E9Q2E4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hectd4E9Q2E4 Gm42596-201ENSMUST00000196305 1958 ntBASIC17.34■□□□□ 0.37
Hectd4E9Q2E4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hectd4E9Q2E4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC17.29■□□□□ 0.36
Hectd4E9Q2E4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.28■□□□□ 0.36
Hectd4E9Q2E4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hectd4E9Q2E4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
Hectd4E9Q2E4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hectd4E9Q2E4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms