Protein–RNA interactions for Protein: Q62266

Sprr1a, Cornifin-A, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sprr1aQ62266 Gm25239-201ENSMUST00000174915 86 ntBASIC23.73■■□□□ 1.39
Sprr1aQ62266 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sprr1aQ62266 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Sprr1aQ62266 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sprr1aQ62266 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Sprr1aQ62266 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sprr1aQ62266 Gm15042-201ENSMUST00000120212 883 ntBASIC21.1■□□□□ 0.97
Sprr1aQ62266 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sprr1aQ62266 Gm15045-201ENSMUST00000117359 883 ntBASIC20.71■□□□□ 0.91
Sprr1aQ62266 Psd-208ENSMUST00000224556 2034 ntBASIC20.69■□□□□ 0.9
Sprr1aQ62266 Gm24109-201ENSMUST00000175489 103 ntBASIC20.42■□□□□ 0.86
Sprr1aQ62266 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sprr1aQ62266 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.32■□□□□ 0.84
Sprr1aQ62266 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sprr1aQ62266 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sprr1aQ62266 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sprr1aQ62266 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sprr1aQ62266 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sprr1aQ62266 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sprr1aQ62266 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sprr1aQ62266 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sprr1aQ62266 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sprr1aQ62266 Gm23366-201ENSMUST00000175022 89 ntBASIC19.86■□□□□ 0.77
Sprr1aQ62266 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sprr1aQ62266 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.81■□□□□ 0.76
Sprr1aQ62266 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sprr1aQ62266 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sprr1aQ62266 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sprr1aQ62266 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sprr1aQ62266 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sprr1aQ62266 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sprr1aQ62266 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.58■□□□□ 0.73
Sprr1aQ62266 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sprr1aQ62266 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sprr1aQ62266 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sprr1aQ62266 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Sprr1aQ62266 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sprr1aQ62266 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.34■□□□□ 0.69
Sprr1aQ62266 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sprr1aQ62266 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sprr1aQ62266 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.24■□□□□ 0.67
Sprr1aQ62266 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sprr1aQ62266 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.05■□□□□ 0.64
Sprr1aQ62266 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sprr1aQ62266 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.03■□□□□ 0.64
Sprr1aQ62266 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sprr1aQ62266 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sprr1aQ62266 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sprr1aQ62266 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sprr1aQ62266 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC18.83■□□□□ 0.6
Sprr1aQ62266 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sprr1aQ62266 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sprr1aQ62266 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sprr1aQ62266 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sprr1aQ62266 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sprr1aQ62266 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sprr1aQ62266 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sprr1aQ62266 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sprr1aQ62266 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sprr1aQ62266 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.63■□□□□ 0.57
Sprr1aQ62266 Gm25238-201ENSMUST00000174914 89 ntBASIC18.61■□□□□ 0.57
Sprr1aQ62266 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Sprr1aQ62266 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Sprr1aQ62266 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sprr1aQ62266 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Sprr1aQ62266 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sprr1aQ62266 Gm27325-201ENSMUST00000175467 74 ntBASIC18.57■□□□□ 0.56
Sprr1aQ62266 Gm42596-201ENSMUST00000196305 1958 ntBASIC18.55■□□□□ 0.56
Sprr1aQ62266 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.55■□□□□ 0.56
Sprr1aQ62266 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC18.53■□□□□ 0.56
Sprr1aQ62266 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sprr1aQ62266 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sprr1aQ62266 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.41■□□□□ 0.54
Sprr1aQ62266 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sprr1aQ62266 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.37■□□□□ 0.53
Sprr1aQ62266 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Sprr1aQ62266 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sprr1aQ62266 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sprr1aQ62266 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sprr1aQ62266 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sprr1aQ62266 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sprr1aQ62266 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Sprr1aQ62266 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Sprr1aQ62266 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sprr1aQ62266 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sprr1aQ62266 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sprr1aQ62266 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.17■□□□□ 0.5
Sprr1aQ62266 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sprr1aQ62266 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sprr1aQ62266 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.14■□□□□ 0.49
Sprr1aQ62266 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.14■□□□□ 0.49
Sprr1aQ62266 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sprr1aQ62266 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sprr1aQ62266 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sprr1aQ62266 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sprr1aQ62266 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sprr1aQ62266 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sprr1aQ62266 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sprr1aQ62266 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.01■□□□□ 0.47
Sprr1aQ62266 Rab21-202ENSMUST00000218831 843 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms