Protein–RNA interactions for Protein: P01896

H-2 class I histocompatibility antigen, alpha chain (Fragment), mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01896 Gm25239-201ENSMUST00000174915 86 ntBASIC23.89■■□□□ 1.41
P01896 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
P01896 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
P01896 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
P01896 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
P01896 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
P01896 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
P01896 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
P01896 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
P01896 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
P01896 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
P01896 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
P01896 Gm15042-201ENSMUST00000120212 883 ntBASIC21.37■■□□□ 1.01
P01896 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
P01896 Psd-208ENSMUST00000224556 2034 ntBASIC21.33■■□□□ 1
P01896 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
P01896 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
P01896 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P01896 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
P01896 Gm15045-201ENSMUST00000117359 883 ntBASIC20.89■□□□□ 0.93
P01896 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
P01896 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.75■□□□□ 0.91
P01896 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P01896 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
P01896 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
P01896 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
P01896 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P01896 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P01896 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.56■□□□□ 0.88
P01896 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P01896 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
P01896 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
P01896 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
P01896 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
P01896 Gm24109-201ENSMUST00000175489 103 ntBASIC20.42■□□□□ 0.86
P01896 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
P01896 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
P01896 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P01896 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
P01896 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
P01896 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
P01896 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
P01896 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
P01896 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
P01896 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
P01896 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
P01896 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.14■□□□□ 0.81
P01896 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01896 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
P01896 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P01896 Gm23366-201ENSMUST00000175022 89 ntBASIC20.07■□□□□ 0.8
P01896 Zxda-201ENSMUST00000117281 2621 ntBASIC20.06■□□□□ 0.8
P01896 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01896 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P01896 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.03■□□□□ 0.8
P01896 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
P01896 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.01■□□□□ 0.79
P01896 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
P01896 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P01896 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P01896 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P01896 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P01896 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
P01896 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
P01896 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
P01896 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
P01896 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
P01896 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
P01896 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
P01896 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
P01896 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.7■□□□□ 0.74
P01896 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.7■□□□□ 0.74
P01896 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.64■□□□□ 0.73
P01896 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
P01896 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
P01896 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
P01896 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.62■□□□□ 0.73
P01896 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.61■□□□□ 0.73
P01896 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P01896 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P01896 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P01896 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.52■□□□□ 0.72
P01896 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
P01896 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P01896 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
P01896 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01896 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01896 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01896 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P01896 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P01896 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P01896 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01896 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
P01896 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01896 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.15■□□□□ 0.66
P01896 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
P01896 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
P01896 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P01896 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P01896 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms