RNA–Protein interactions for RNA: ENST00000539277.5

TMTC1-203, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMTC1, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-203ENST00000539277 ABCA5Q8WWZ7 1642 aa28.84■■■□□ 2.21
TMTC1-203ENST00000539277 P3H3Q8IVL6 736 aa28.82■■■□□ 2.2
TMTC1-203ENST00000539277 VPS8Q8N3P4 1428 aa28.79■■■□□ 2.2
TMTC1-203ENST00000539277 ARAP1Q96P48 1450 aa28.78■■■□□ 2.2
TMTC1-203ENST00000539277 THOC2Q8NI27 1593 aaKnown RBP28.75■■■□□ 2.19
TMTC1-203ENST00000539277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.75■■■□□ 2.19
TMTC1-203ENST00000539277 ARHGAP35Q9NRY4 1499 aa28.74■■■□□ 2.19
TMTC1-203ENST00000539277 IFT140Q96RY7 1462 aa28.71■■■□□ 2.19
TMTC1-203ENST00000539277 CUL7Q14999 1698 aa28.71■■■□□ 2.19
TMTC1-203ENST00000539277 APLP2Q06481 763 aa28.69■■■□□ 2.18
TMTC1-203ENST00000539277 CCER1Q8TC90 406 aaPredicted RBP28.69■■■□□ 2.18
TMTC1-203ENST00000539277 PBRM1Q86U86 1689 aa28.61■■■□□ 2.17
TMTC1-203ENST00000539277 GRIN2BQ13224 1484 aa28.59■■■□□ 2.17
TMTC1-203ENST00000539277 YTHDC1Q96MU7 727 aaKnown RBP28.58■■■□□ 2.17
TMTC1-203ENST00000539277 ATP1B4Q9UN42 357 aaPredicted RBP28.56■■■□□ 2.16
TMTC1-203ENST00000539277 EIF4G3O43432 1585 aaKnown RBP28.55■■■□□ 2.16
TMTC1-203ENST00000539277 FHOD3Q2V2M9 1422 aa28.55■■■□□ 2.16
TMTC1-203ENST00000539277 FBLN2P98095 1184 aa28.54■■■□□ 2.16
TMTC1-203ENST00000539277 FHAD1B1AJZ9 1412 aa28.53■■■□□ 2.16
TMTC1-203ENST00000539277 KANK4Q5T7N3 995 aaPredicted RBP28.53■■■□□ 2.16
TMTC1-203ENST00000539277 SNAPC4Q5SXM2 1469 aa28.52■■■□□ 2.16
TMTC1-203ENST00000539277 ADAMTS12P58397 1594 aa28.49■■■□□ 2.15
TMTC1-203ENST00000539277 CTTNBP2Q8WZ74 1663 aa28.47■■■□□ 2.15
TMTC1-203ENST00000539277 CHMP7Q8WUX9 453 aaPredicted RBP28.4■■■□□ 2.14
TMTC1-203ENST00000539277 BCL11AQ9H165 835 aa28.34■■■□□ 2.13
TMTC1-203ENST00000539277 HNRNPUL2Q1KMD3 747 aaKnown RBP28.32■■■□□ 2.12
TMTC1-203ENST00000539277 GRIN2AQ12879 1464 aa28.29■■■□□ 2.12
TMTC1-203ENST00000539277 PCF11O94913 1555 aaKnown RBP28.29■■■□□ 2.12
TMTC1-203ENST00000539277 EFCAB5A4FU69 1503 aa28.28■■■□□ 2.12
TMTC1-203ENST00000539277 IQGAP2Q13576 1575 aa28.25■■■□□ 2.11
TMTC1-203ENST00000539277 MAGI1Q96QZ7 1491 aaPredicted RBP28.25■■■□□ 2.11
TMTC1-203ENST00000539277 ARID3CA6NKF2 412 aa28.24■■■□□ 2.11
TMTC1-203ENST00000539277 SYNJ2O15056 1496 aa28.22■■■□□ 2.11
TMTC1-203ENST00000539277 SAMD9Q5K651 1589 aa28.2■■■□□ 2.11
TMTC1-203ENST00000539277 ZNF316A6NFI3 1004 aaPredicted RBP28.18■■■□□ 2.1
TMTC1-203ENST00000539277 FMN1Q68DA7 1419 aa28.16■■■□□ 2.1
TMTC1-203ENST00000539277 TIAM1Q13009 1591 aa28.16■■■□□ 2.1
TMTC1-203ENST00000539277 KIAA0586Q9BVV6 1533 aa28.14■■■□□ 2.09
TMTC1-203ENST00000539277 CEP170Q5SW79 1584 aa28.14■■■□□ 2.09
TMTC1-203ENST00000539277 CASKIN1Q8WXD9 1431 aa28.14■■■□□ 2.09
TMTC1-203ENST00000539277 MIER1Q8N108 512 aa28.11■■■□□ 2.09
TMTC1-203ENST00000539277 FYCO1Q9BQS8 1478 aa28.1■■■□□ 2.09
TMTC1-203ENST00000539277 ITGAEP38570 1179 aa28.09■■■□□ 2.09
TMTC1-203ENST00000539277 LRRC9Q6ZRR7 1453 aa28.09■■■□□ 2.09
TMTC1-203ENST00000539277 ANP32EQ9BTT0 268 aa28.08■■■□□ 2.09
TMTC1-203ENST00000539277 JPH4Q96JJ6 628 aa28.04■■■□□ 2.08
TMTC1-203ENST00000539277 DISP1Q96F81 1524 aa28.03■■■□□ 2.08
TMTC1-203ENST00000539277 UGGT2Q9NYU1 1516 aa28.03■■■□□ 2.08
TMTC1-203ENST00000539277 PHLDB1Q86UU1 1377 aa28■■■□□ 2.07
TMTC1-203ENST00000539277 NUP160Q12769 1436 aa28■■■□□ 2.07
TMTC1-203ENST00000539277 MAP3K1Q13233 1512 aa27.98■■■□□ 2.07
TMTC1-203ENST00000539277 CFAP43Q8NDM7 1665 aa27.97■■■□□ 2.07
TMTC1-203ENST00000539277 LRRIQ1Q96JM4 1722 aa27.96■■■□□ 2.07
TMTC1-203ENST00000539277 MTUS2Q5JR59 1369 aa27.96■■■□□ 2.07
TMTC1-203ENST00000539277 KIAA0556O60303 1618 aa27.96■■■□□ 2.07
TMTC1-203ENST00000539277 CCNB3Q8WWL7 1395 aa27.94■■■□□ 2.06
TMTC1-203ENST00000539277 FAM50AQ14320 339 aaKnown RBP27.93■■■□□ 2.06
TMTC1-203ENST00000539277 RRBP1Q9P2E9 1410 aaKnown RBP27.91■■■□□ 2.06
TMTC1-203ENST00000539277 CDK13Q14004 1512 aaKnown RBP27.9■■■□□ 2.06
TMTC1-203ENST00000539277 CHD1O14646 1710 aa27.89■■■□□ 2.06
TMTC1-203ENST00000539277 SUPT16HQ9Y5B9 1047 aaKnown RBP27.85■■■□□ 2.05
TMTC1-203ENST00000539277 TSHZ2Q9NRE2 1034 aa27.84■■■□□ 2.05
TMTC1-203ENST00000539277 PLB1Q6P1J6 1458 aa27.83■■■□□ 2.05
TMTC1-203ENST00000539277 EPRSP07814 1512 aaKnown RBP27.83■■■□□ 2.05
TMTC1-203ENST00000539277 MAGI3Q5TCQ9 1506 aa27.82■■■□□ 2.04
TMTC1-203ENST00000539277 CARMIL2Q6F5E8 1435 aa27.81■■■□□ 2.04
TMTC1-203ENST00000539277 HECW1Q76N89 1606 aa27.8■■■□□ 2.04
TMTC1-203ENST00000539277 PRG4Q92954 1404 aaPredicted RBP27.79■■■□□ 2.04
TMTC1-203ENST00000539277 NUP153P49790 1475 aaKnown RBP27.75■■■□□ 2.03
TMTC1-203ENST00000539277 NCOA2Q15596 1464 aa27.74■■■□□ 2.03
TMTC1-203ENST00000539277 CCDC18Q5T9S5 1454 aa27.73■■■□□ 2.03
TMTC1-203ENST00000539277 RAPGEF6Q8TEU7 1601 aa27.7■■■□□ 2.02
TMTC1-203ENST00000539277 EHBP1L1Q8N3D4 1523 aa27.67■■■□□ 2.02
TMTC1-203ENST00000539277 FGD6Q6ZV73 1430 aa27.66■■■□□ 2.02
TMTC1-203ENST00000539277 ERCC6L2Q5T890 1561 aa27.65■■■□□ 2.02
TMTC1-203ENST00000539277 PTPRGP23470 1445 aa27.63■■■□□ 2.01
TMTC1-203ENST00000539277 SUPT6HQ7KZ85 1726 aaKnown RBP27.62■■■□□ 2.01
TMTC1-203ENST00000539277 CLSPNQ9HAW4 1339 aa27.61■■■□□ 2.01
TMTC1-203ENST00000539277 MYOM3Q5VTT5 1437 aa27.6■■■□□ 2.01
TMTC1-203ENST00000539277 CDK11AQ9UQ88 783 aaPredicted RBP27.55■■■□□ 2
TMTC1-203ENST00000539277 RAB3GAP2Q9H2M9 1393 aa27.52■■■□□ 2
TMTC1-203ENST00000539277 CHIC2Q9UKJ5 165 aa27.51■■□□□ 1.99
TMTC1-203ENST00000539277 ARHGEF11O15085 1522 aa27.5■■□□□ 1.99
TMTC1-203ENST00000539277 ABCA8O94911 1581 aa27.49■■□□□ 1.99
TMTC1-203ENST00000539277 PTPRKQ15262 1439 aa27.49■■□□□ 1.99
TMTC1-203ENST00000539277 ZNF644Q9H582 1327 aaPredicted RBP27.49■■□□□ 1.99
TMTC1-203ENST00000539277 ATP10BO94823 1461 aa27.48■■□□□ 1.99
TMTC1-203ENST00000539277 SHROOM2Q13796 1616 aa27.48■■□□□ 1.99
TMTC1-203ENST00000539277 DHX57Q6P158 1386 aaKnown RBP27.47■■□□□ 1.99
TMTC1-203ENST00000539277 CLASP1Q7Z460 1538 aa27.46■■□□□ 1.99
TMTC1-203ENST00000539277 PLEKHD1A6NEE1 506 aa27.45■■□□□ 1.99
TMTC1-203ENST00000539277 TROQ12816 1431 aaPredicted RBP27.44■■□□□ 1.98
TMTC1-203ENST00000539277 PTPN23Q9H3S7 1636 aa27.44■■□□□ 1.98
TMTC1-203ENST00000539277 ZNF777Q9ULD5 760 aaPredicted RBP27.43■■□□□ 1.98
TMTC1-203ENST00000539277 SETD5Q9C0A6 1442 aa27.43■■□□□ 1.98
TMTC1-203ENST00000539277 PRKCSHP14314 528 aaPredicted RBP27.43■■□□□ 1.98
TMTC1-203ENST00000539277 KIF14Q15058 1648 aa27.41■■□□□ 1.98
TMTC1-203ENST00000539277 UACAQ9BZF9 1416 aa27.4■■□□□ 1.98
TMTC1-203ENST00000539277 RRP7BPQ9NSQ0 103 aa27.4■■□□□ 1.98
TMTC1-203ENST00000539277 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.39■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms