RNA–Protein interactions for RNA: ENST00000539277.5

TMTC1-203, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMTC1, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-203ENST00000539277 NISCHQ9Y2I1 1504 aa41.2■■■■■ 4.19
TMTC1-203ENST00000539277 CCDC180Q9P1Z9 1646 aa35.52■■■■□ 3.28
TMTC1-203ENST00000539277 DCAF8L2P0C7V8 631 aa34.68■■■■□ 3.14
TMTC1-203ENST00000539277 ZCCHC6Q5VYS8 1495 aaKnown RBP34.6■■■■□ 3.13
TMTC1-203ENST00000539277 SHROOM4Q9ULL8 1493 aa34.41■■■■□ 3.1
TMTC1-203ENST00000539277 ABCC9O60706 1549 aa34.08■■■■□ 3.05
TMTC1-203ENST00000539277 DCAF1Q9Y4B6 1507 aa33.74■■■□□ 2.99
TMTC1-203ENST00000539277 SCRIBQ14160 1630 aa33.21■■■□□ 2.91
TMTC1-203ENST00000539277 MYO15BQ96JP2 1530 aa33.2■■■□□ 2.9
TMTC1-203ENST00000539277 SUPT5HO00267 1087 aaKnown RBP33.17■■■□□ 2.9
TMTC1-203ENST00000539277 NACADO15069 1562 aa33.15■■■□□ 2.9
TMTC1-203ENST00000539277 RB1CC1Q8TDY2 1594 aa32.9■■■□□ 2.86
TMTC1-203ENST00000539277 PABPN1Q86U42 306 aaKnown RBP eCLIP32.38■■■□□ 2.77
TMTC1-203ENST00000539277 UNC13AQ9UPW8 1703 aa32.33■■■□□ 2.77
TMTC1-203ENST00000539277 CECR2Q9BXF3 1484 aa32.27■■■□□ 2.76
TMTC1-203ENST00000539277 RSF1Q96T23 1441 aaPredicted RBP32.17■■■□□ 2.74
TMTC1-203ENST00000539277 BICRAQ9NZM4 1560 aa32.03■■■□□ 2.72
TMTC1-203ENST00000539277 MROH2BQ7Z745 1585 aa32■■■□□ 2.71
TMTC1-203ENST00000539277 HRCP23327 699 aa31.92■■■□□ 2.7
TMTC1-203ENST00000539277 WIZO95785 1651 aa31.76■■■□□ 2.67
TMTC1-203ENST00000539277 BAZ1AQ9NRL2 1556 aaPredicted RBP31.73■■■□□ 2.67
TMTC1-203ENST00000539277 SMARCA4P51532 1647 aa31.62■■■□□ 2.65
TMTC1-203ENST00000539277 CHIC1Q5VXU3 224 aa31.59■■■□□ 2.65
TMTC1-203ENST00000539277 PPARGC1BQ86YN6 1023 aaKnown RBP31.37■■■□□ 2.61
TMTC1-203ENST00000539277 PELP1Q8IZL8 1130 aaKnown RBP31.3■■■□□ 2.6
TMTC1-203ENST00000539277 TOP2AP11388 1531 aaKnown RBP31.22■■■□□ 2.59
TMTC1-203ENST00000539277 PCGF6Q9BYE7 350 aa31.17■■■□□ 2.58
TMTC1-203ENST00000539277 ATAD2BQ9ULI0 1458 aa31.13■■■□□ 2.57
TMTC1-203ENST00000539277 CCDC88BA6NC98 1476 aa31.09■■■□□ 2.57
TMTC1-203ENST00000539277 EIF4G1Q04637 1599 aaKnown RBP31.07■■■□□ 2.56
TMTC1-203ENST00000539277 PEG3Q9GZU2 1588 aa31.02■■■□□ 2.56
TMTC1-203ENST00000539277 SMARCA2P51531 1590 aa31.02■■■□□ 2.56
TMTC1-203ENST00000539277 BAZ1BQ9UIG0 1483 aaKnown RBP30.99■■■□□ 2.55
TMTC1-203ENST00000539277 TRIM41Q8WV44 630 aa30.94■■■□□ 2.54
TMTC1-203ENST00000539277 FAM9AQ8IZU1 332 aaPredicted RBP30.72■■■□□ 2.51
TMTC1-203ENST00000539277 NCAPD3P42695 1498 aa30.7■■■□□ 2.51
TMTC1-203ENST00000539277 LOC105371045A0A1W2PR82 267 aa30.67■■■□□ 2.5
TMTC1-203ENST00000539277 ABCC8Q09428 1581 aa30.66■■■□□ 2.5
TMTC1-203ENST00000539277 CC2D2AQ9P2K1 1620 aa30.62■■■□□ 2.49
TMTC1-203ENST00000539277 HMGXB3Q12766 1538 aa30.58■■■□□ 2.49
TMTC1-203ENST00000539277 EHMT2Q96KQ7 1210 aa30.56■■■□□ 2.48
TMTC1-203ENST00000539277 SCAF1Q9H7N4 1312 aaKnown RBP30.48■■■□□ 2.47
TMTC1-203ENST00000539277 DNAJC5BQ9UF47 199 aa30.32■■■□□ 2.44
TMTC1-203ENST00000539277 WRNQ14191 1432 aaPredicted RBP eCLIP30.27■■■□□ 2.44
TMTC1-203ENST00000539277 MYT1Q01538 1121 aa30.16■■■□□ 2.42
TMTC1-203ENST00000539277 SYNJ1O43426 1573 aa30.15■■■□□ 2.42
TMTC1-203ENST00000539277 SOGA1O94964 1423 aa30.14■■■□□ 2.42
TMTC1-203ENST00000539277 CFTRP13569 1480 aa30.13■■■□□ 2.41
TMTC1-203ENST00000539277 CADPSQ9ULU8 1353 aa30.06■■■□□ 2.4
TMTC1-203ENST00000539277 RUSC2Q8N2Y8 1516 aa30.06■■■□□ 2.4
TMTC1-203ENST00000539277 NESP48681 1621 aa29.99■■■□□ 2.39
TMTC1-203ENST00000539277 TRIM26Q12899 539 aaPredicted RBP29.95■■■□□ 2.38
TMTC1-203ENST00000539277 CUX1P39880 1505 aa29.86■■■□□ 2.37
TMTC1-203ENST00000539277 CSRNP3Q8WYN3 585 aa29.84■■■□□ 2.37
TMTC1-203ENST00000539277 TOP2BQ02880 1626 aa29.83■■■□□ 2.37
TMTC1-203ENST00000539277 ZEB1P37275 1124 aaPredicted RBP29.79■■■□□ 2.36
TMTC1-203ENST00000539277 FANCD2Q9BXW9 1451 aa29.78■■■□□ 2.36
TMTC1-203ENST00000539277 PRDM2Q13029 1718 aa29.73■■■□□ 2.35
TMTC1-203ENST00000539277 BIVM-ERCC5R4GMW8 1640 aa29.72■■■□□ 2.35
TMTC1-203ENST00000539277 UBTFP17480 764 aaKnown RBP29.68■■■□□ 2.34
TMTC1-203ENST00000539277 EEA1Q15075 1411 aa29.66■■■□□ 2.34
TMTC1-203ENST00000539277 LAMC3Q9Y6N6 1575 aa29.57■■■□□ 2.32
TMTC1-203ENST00000539277 ACIN1Q9UKV3 1341 aaKnown RBP29.56■■■□□ 2.32
TMTC1-203ENST00000539277 FGD5Q6ZNL6 1462 aa29.54■■■□□ 2.32
TMTC1-203ENST00000539277 CEP164Q9UPV0 1460 aa29.51■■■□□ 2.32
TMTC1-203ENST00000539277 RANGAP1P46060 587 aaPredicted RBP29.51■■■□□ 2.31
TMTC1-203ENST00000539277 NEUROD1Q13562 356 aa29.51■■■□□ 2.31
TMTC1-203ENST00000539277 PDS5BQ9NTI5 1447 aa29.46■■■□□ 2.31
TMTC1-203ENST00000539277 GOLGA3Q08378 1498 aa29.46■■■□□ 2.31
TMTC1-203ENST00000539277 RAPGEF2Q9Y4G8 1499 aa29.45■■■□□ 2.3
TMTC1-203ENST00000539277 CUX2O14529 1486 aa29.44■■■□□ 2.3
TMTC1-203ENST00000539277 TOPBP1Q92547 1522 aa29.44■■■□□ 2.3
TMTC1-203ENST00000539277 KIF27Q86VH2 1401 aa29.43■■■□□ 2.3
TMTC1-203ENST00000539277 RAD54L2Q9Y4B4 1467 aa29.43■■■□□ 2.3
TMTC1-203ENST00000539277 URB2Q14146 1524 aaKnown RBP29.41■■■□□ 2.3
TMTC1-203ENST00000539277 GTF3C3Q9Y5Q9 886 aa29.41■■■□□ 2.3
TMTC1-203ENST00000539277 CEP162Q5TB80 1403 aa29.4■■■□□ 2.3
TMTC1-203ENST00000539277 KIF21AQ7Z4S6 1674 aa29.4■■■□□ 2.3
TMTC1-203ENST00000539277 TNIKQ9UKE5 1360 aa29.39■■■□□ 2.3
TMTC1-203ENST00000539277 DNMBPQ6XZF7 1577 aa29.38■■■□□ 2.29
TMTC1-203ENST00000539277 POLA1P09884 1462 aaPredicted RBP29.35■■■□□ 2.29
TMTC1-203ENST00000539277 KIF21BO75037 1637 aa29.32■■■□□ 2.28
TMTC1-203ENST00000539277 PRXQ9BXM0 1461 aa29.24■■■□□ 2.27
TMTC1-203ENST00000539277 TTBK1Q5TCY1 1321 aaPredicted RBP29.24■■■□□ 2.27
TMTC1-203ENST00000539277 IGF1RP08069 1367 aa29.24■■■□□ 2.27
TMTC1-203ENST00000539277 TDRD9Q8NDG6 1382 aaKnown RBP29.18■■■□□ 2.26
TMTC1-203ENST00000539277 CENPBP07199 599 aaPredicted RBP29.13■■■□□ 2.25
TMTC1-203ENST00000539277 ABCA10Q8WWZ4 1543 aa29.12■■■□□ 2.25
TMTC1-203ENST00000539277 CLIP1P30622 1438 aa29.12■■■□□ 2.25
TMTC1-203ENST00000539277 ERCC6Q03468 1493 aa29.11■■■□□ 2.25
TMTC1-203ENST00000539277 CARMIL1Q5VZK9 1371 aa29.1■■■□□ 2.25
TMTC1-203ENST00000539277 MRC2Q9UBG0 1479 aa29.07■■■□□ 2.24
TMTC1-203ENST00000539277 ERICH3Q5RHP9 1530 aa29.06■■■□□ 2.24
TMTC1-203ENST00000539277 GAPVD1Q14C86 1478 aa28.93■■■□□ 2.22
TMTC1-203ENST00000539277 AQRO60306 1485 aaKnown RBP eCLIP28.92■■■□□ 2.22
TMTC1-203ENST00000539277 WDR97A6NE52 1622 aa28.91■■■□□ 2.22
TMTC1-203ENST00000539277 TARBP1Q13395 1621 aaKnown RBP28.89■■■□□ 2.22
TMTC1-203ENST00000539277 DIEXFQ68CQ4 756 aaKnown RBP28.88■■■□□ 2.21
TMTC1-203ENST00000539277 WDR62O43379 1518 aa28.84■■■□□ 2.21
TMTC1-203ENST00000539277 ZNF608Q9ULD9 1512 aaPredicted RBP28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms