RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 IGF1RP08069 1367 aa38.75■■■■□ 3.79
DHFR-203ENST00000505337 CLASP1Q7Z460 1538 aa38.75■■■■□ 3.79
DHFR-203ENST00000505337 RIMBP3CA6NJZ7 1639 aa38.75■■■■□ 3.79
DHFR-203ENST00000505337 RIMBP3BA6NNM3 1639 aa38.75■■■■□ 3.79
DHFR-203ENST00000505337 RIMBP3Q9UFD9 1639 aa38.75■■■■□ 3.79
DHFR-203ENST00000505337 FHAD1B1AJZ9 1412 aa38.74■■■■□ 3.79
DHFR-203ENST00000505337 ARHGEF11O15085 1522 aa38.73■■■■□ 3.79
DHFR-203ENST00000505337 GRIN2AQ12879 1464 aa38.71■■■■□ 3.79
DHFR-203ENST00000505337 CUL7Q14999 1698 aa38.63■■■■□ 3.77
DHFR-203ENST00000505337 NUP160Q12769 1436 aa38.57■■■■□ 3.76
DHFR-203ENST00000505337 VPS8Q8N3P4 1428 aa38.56■■■■□ 3.76
DHFR-203ENST00000505337 CARMIL1Q5VZK9 1371 aa38.56■■■■□ 3.76
DHFR-203ENST00000505337 CEP170Q5SW79 1584 aa38.55■■■■□ 3.76
DHFR-203ENST00000505337 ARAP1Q96P48 1450 aa38.46■■■■□ 3.75
DHFR-203ENST00000505337 PPARGC1BQ86YN6 1023 aaKnown RBP38.4■■■■□ 3.74
DHFR-203ENST00000505337 CYB5RLQ6IPT4 315 aa38.39■■■■□ 3.74
DHFR-203ENST00000505337 CTTNBP2Q8WZ74 1663 aa38.37■■■■□ 3.73
DHFR-203ENST00000505337 HRCP23327 699 aa38.35■■■■□ 3.73
DHFR-203ENST00000505337 ARHGAP35Q9NRY4 1499 aa38.33■■■■□ 3.73
DHFR-203ENST00000505337 SHROOM2Q13796 1616 aa38.28■■■■□ 3.72
DHFR-203ENST00000505337 ERCC6L2Q5T890 1561 aa38.25■■■■□ 3.71
DHFR-203ENST00000505337 RANGAP1P46060 587 aaPredicted RBP38.24■■■■□ 3.71
DHFR-203ENST00000505337 JPH4Q96JJ6 628 aa38.18■■■■□ 3.7
DHFR-203ENST00000505337 KIAA0586Q9BVV6 1533 aa38.15■■■■□ 3.7
DHFR-203ENST00000505337 PRG4Q92954 1404 aaPredicted RBP38.11■■■■□ 3.69
DHFR-203ENST00000505337 EFCAB5A4FU69 1503 aa38.07■■■■□ 3.69
DHFR-203ENST00000505337 TTBK1Q5TCY1 1321 aaPredicted RBP38■■■■□ 3.67
DHFR-203ENST00000505337 APLP2Q06481 763 aa37.94■■■■□ 3.66
DHFR-203ENST00000505337 SAMD9Q5K651 1589 aa37.91■■■■□ 3.66
DHFR-203ENST00000505337 IQGAP2Q13576 1575 aa37.89■■■■□ 3.66
DHFR-203ENST00000505337 PCF11O94913 1555 aaKnown RBP37.86■■■■□ 3.65
DHFR-203ENST00000505337 MAP3K1Q13233 1512 aa37.85■■■■□ 3.65
DHFR-203ENST00000505337 CFAP43Q8NDM7 1665 aa37.83■■■■□ 3.65
DHFR-203ENST00000505337 TIAM1Q13009 1591 aa37.82■■■■□ 3.64
DHFR-203ENST00000505337 FHOD3Q2V2M9 1422 aa37.77■■■■□ 3.64
DHFR-203ENST00000505337 FYCO1Q9BQS8 1478 aa37.71■■■■□ 3.63
DHFR-203ENST00000505337 UGGT2Q9NYU1 1516 aa37.71■■■■□ 3.63
DHFR-203ENST00000505337 CARMIL2Q6F5E8 1435 aa37.7■■■■□ 3.63
DHFR-203ENST00000505337 DISP1Q96F81 1524 aa37.7■■■■□ 3.63
DHFR-203ENST00000505337 KANK4Q5T7N3 995 aaPredicted RBP37.66■■■■□ 3.62
DHFR-203ENST00000505337 CASKIN1Q8WXD9 1431 aa37.62■■■■□ 3.61
DHFR-203ENST00000505337 PTPRGP23470 1445 aa37.62■■■■□ 3.61
DHFR-203ENST00000505337 TRHP20396 242 aaPredicted RBP37.61■■■■□ 3.61
DHFR-203ENST00000505337 FMN1Q68DA7 1419 aa37.61■■■■□ 3.61
DHFR-203ENST00000505337 P3H3Q8IVL6 736 aa37.58■■■■□ 3.61
DHFR-203ENST00000505337 ZEB1P37275 1124 aaPredicted RBP37.56■■■■□ 3.6
DHFR-203ENST00000505337 LRRIQ1Q96JM4 1722 aa37.55■■■■□ 3.6
DHFR-203ENST00000505337 KIAA0556O60303 1618 aa37.55■■■■□ 3.6
DHFR-203ENST00000505337 ADCY10Q96PN6 1610 aa37.55■■■■□ 3.6
DHFR-203ENST00000505337 LRRC9Q6ZRR7 1453 aa37.54■■■■□ 3.6
DHFR-203ENST00000505337 RRBP1Q9P2E9 1410 aaKnown RBP37.51■■■■□ 3.6
DHFR-203ENST00000505337 NPM1P06748 294 aaKnown RBP eCLIP37.39■■■■□ 3.58
DHFR-203ENST00000505337 UACAQ9BZF9 1416 aa37.37■■■■□ 3.57
DHFR-203ENST00000505337 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.36■■■■□ 3.57
DHFR-203ENST00000505337 UHRF1BP1LA0JNW5 1464 aa37.34■■■■□ 3.57
DHFR-203ENST00000505337 MAPKBP1O60336 1514 aa37.32■■■■□ 3.57
DHFR-203ENST00000505337 HECW1Q76N89 1606 aa37.31■■■■□ 3.56
DHFR-203ENST00000505337 ABCC2Q92887 1545 aa37.31■■■■□ 3.56
DHFR-203ENST00000505337 CCNB3Q8WWL7 1395 aa37.27■■■■□ 3.56
DHFR-203ENST00000505337 HNRNPUL2Q1KMD3 747 aaKnown RBP37.26■■■■□ 3.56
DHFR-203ENST00000505337 CCER1Q8TC90 406 aaPredicted RBP37.24■■■■□ 3.55
DHFR-203ENST00000505337 PLB1Q6P1J6 1458 aa37.23■■■■□ 3.55
DHFR-203ENST00000505337 CCDC18Q5T9S5 1454 aa37.21■■■■□ 3.55
DHFR-203ENST00000505337 PHLDB1Q86UU1 1377 aa37.2■■■■□ 3.54
DHFR-203ENST00000505337 KIF13AQ9H1H9 1805 aa37.19■■■■□ 3.54
DHFR-203ENST00000505337 ABCC10Q5T3U5 1492 aa37.18■■■■□ 3.54
DHFR-203ENST00000505337 ATP1B4Q9UN42 357 aaPredicted RBP37.18■■■■□ 3.54
DHFR-203ENST00000505337 KDM5BQ9UGL1 1544 aa37.18■■■■□ 3.54
DHFR-203ENST00000505337 EHBP1L1Q8N3D4 1523 aa37.16■■■■□ 3.54
DHFR-203ENST00000505337 ABCA8O94911 1581 aa37.16■■■■□ 3.54
DHFR-203ENST00000505337 SUPT6HQ7KZ85 1726 aaKnown RBP37.12■■■■□ 3.53
DHFR-203ENST00000505337 FAM69CQ0P6D2 419 aa37.12■■■■□ 3.53
DHFR-203ENST00000505337 DIP2BQ9P265 1576 aa37.12■■■■□ 3.53
DHFR-203ENST00000505337 ASXL2Q76L83 1435 aa37.09■■■■□ 3.53
DHFR-203ENST00000505337 ZCCHC11Q5TAX3 1644 aaKnown RBP37.08■■■■□ 3.53
DHFR-203ENST00000505337 EPRSP07814 1512 aaKnown RBP37.07■■■■□ 3.52
DHFR-203ENST00000505337 MAGI3Q5TCQ9 1506 aa37.07■■■■□ 3.52
DHFR-203ENST00000505337 RAPGEF6Q8TEU7 1601 aa37.06■■■■□ 3.52
DHFR-203ENST00000505337 MTUS2Q5JR59 1369 aa37.04■■■■□ 3.52
DHFR-203ENST00000505337 CDK13Q14004 1512 aaKnown RBP36.98■■■■□ 3.51
DHFR-203ENST00000505337 NCOA2Q15596 1464 aa36.97■■■■□ 3.51
DHFR-203ENST00000505337 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.95■■■■□ 3.512e-9■■■■■ 39.6
DHFR-203ENST00000505337 FGD6Q6ZV73 1430 aa36.92■■■■□ 3.5
DHFR-203ENST00000505337 NUP153P49790 1475 aaKnown RBP36.92■■■■□ 3.5
DHFR-203ENST00000505337 ATP10BO94823 1461 aa36.88■■■■□ 3.49
DHFR-203ENST00000505337 GLI2P10070 1586 aa36.88■■■■□ 3.49
DHFR-203ENST00000505337 ARID3CA6NKF2 412 aa36.87■■■■□ 3.49
DHFR-203ENST00000505337 WDR7Q9Y4E6 1490 aa36.87■■■■□ 3.49
DHFR-203ENST00000505337 MYOM3Q5VTT5 1437 aa36.86■■■■□ 3.49
DHFR-203ENST00000505337 PTPN23Q9H3S7 1636 aa36.78■■■■□ 3.48
DHFR-203ENST00000505337 TSPOAP1O95153 1857 aa36.78■■■■□ 3.48
DHFR-203ENST00000505337 DHX57Q6P158 1386 aaKnown RBP36.75■■■■□ 3.47
DHFR-203ENST00000505337 FAM50AQ14320 339 aaKnown RBP36.73■■■■□ 3.47
DHFR-203ENST00000505337 KCNH8Q96L42 1107 aa36.71■■■■□ 3.47
DHFR-203ENST00000505337 ITGAEP38570 1179 aa36.71■■■■□ 3.47
DHFR-203ENST00000505337 MAP3K4Q9Y6R4 1608 aa36.7■■■■□ 3.47
DHFR-203ENST00000505337 PPRC1Q5VV67 1664 aaKnown RBP36.7■■■■□ 3.47
DHFR-203ENST00000505337 TCOF1Q13428 1488 aaKnown RBP36.69■■■■□ 3.46
DHFR-203ENST00000505337 CLSPNQ9HAW4 1339 aa36.66■■■■□ 3.46
DHFR-203ENST00000505337 RAB3GAP2Q9H2M9 1393 aa36.65■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms