RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.01■■■□□ 2.557e-43■■□□□ 14
DHFR-203ENST00000505337 RPS3P23396 243 aaKnown RBP eCLIP24.44■■□□□ 1.53e-32■■■□□ 17.4
DHFR-203ENST00000505337 DKC1O60832 514 aaKnown RBP eCLIP27■■□□□ 1.918e-28■■□□□ 13.8
DHFR-203ENST00000505337 AQRO60306 1485 aaKnown RBP eCLIP39.59■■■■□ 3.932e-19■■■□□ 14.9
DHFR-203ENST00000505337 NOL12Q9UGY1 213 aaKnown RBP eCLIP26.85■■□□□ 1.893e-19■□□□□ 10.9
DHFR-203ENST00000505337 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.12■■□□□ 1.455e-19■□□□□ 11
DHFR-203ENST00000505337 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.47■■□□□ 1.513e-18■■■■□ 25.9
DHFR-203ENST00000505337 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.03■■□□□ 1.927e-18■■■■□ 26.7
DHFR-203ENST00000505337 FTOQ9C0B1 505 aaKnown RBP eCLIP28.64■■■□□ 2.189e-18■■■■■ 29.4
DHFR-203ENST00000505337 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.29■■□□□ 1.163e-17■■■□□ 16.1
DHFR-203ENST00000505337 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.68■■□□□ 1.71e-16■■■■■ 49.9
DHFR-203ENST00000505337 GRSF1Q12849 480 aaKnown RBP eCLIP23.74■■□□□ 1.391e-16■□□□□ 9.7
DHFR-203ENST00000505337 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.1■■□□□ 1.936e-15■□□□□ 11.3
DHFR-203ENST00000505337 TROVE2P10155 538 aaKnown RBP eCLIP24.87■■□□□ 1.574e-14■■□□□ 12
DHFR-203ENST00000505337 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.44■■□□□ 1.51e-13■■■■■ 115.5
DHFR-203ENST00000505337 AGGF1Q8N302 714 aaeCLIP25.4■■□□□ 1.665e-13■■■□□ 18.9
DHFR-203ENST00000505337 DDX3XO00571 662 aaKnown RBP eCLIP26.68■■□□□ 1.861e-12■□□□□ 9.6
DHFR-203ENST00000505337 RBM15Q96T37 977 aaKnown RBP eCLIP25.6■■□□□ 1.692e-12■□□□□ 8.9
DHFR-203ENST00000505337 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.5■■■□□ 2.159e-11■■□□□ 14.2
DHFR-203ENST00000505337 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.42■■□□□ 1.341e-10■■■□□ 15.9
DHFR-203ENST00000505337 QKIQ96PU8 341 aaKnown RBP eCLIP25.52■■□□□ 1.682e-10■■■■■ 50.2
DHFR-203ENST00000505337 YBX3P16989 372 aaKnown RBP eCLIP29.42■■■□□ 2.37e-10■□□□□ 10
DHFR-203ENST00000505337 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.49■■□□□ 1.991e-9■■□□□ 13.5
DHFR-203ENST00000505337 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.66■■□□□ 1.541e-9■■■□□ 17
DHFR-203ENST00000505337 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.95■■■■□ 3.512e-9■■■■■ 39.6
DHFR-203ENST00000505337 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.84■■■■□ 3.174e-9■□□□□ 9.5
DHFR-203ENST00000505337 NKRFO15226 690 aaKnown RBP eCLIP27.29■■□□□ 1.966e-9■□□□□ 11.2
DHFR-203ENST00000505337 AARSP49588 968 aaKnown RBP eCLIP26.11■■□□□ 1.778e-9■■■■■ 62.5
DHFR-203ENST00000505337 AKAP1Q92667 903 aaKnown RBP eCLIP21.45■■□□□ 1.028e-9■■■□□ 18.5
DHFR-203ENST00000505337 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.75■■■□□ 2.192e-8■■■□□ 17.8
DHFR-203ENST00000505337 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.24■■□□□ 1.632e-8■□□□□ 10.2
DHFR-203ENST00000505337 SF3B1O75533 1304 aaKnown RBP eCLIP25.52■■□□□ 1.681e-7■■■■■ 172.3
DHFR-203ENST00000505337 NIP7Q9Y221 180 aaKnown RBP eCLIP29.62■■■□□ 2.331e-7■■□□□ 13.5
DHFR-203ENST00000505337 XRCC6P12956 609 aaKnown RBP eCLIP28.87■■■□□ 2.211e-7■■■□□ 16.3
DHFR-203ENST00000505337 HLTFQ14527 1009 aaKnown RBP eCLIP26.02■■□□□ 1.762e-7■■■■□ 21.4
DHFR-203ENST00000505337 RBM5P52756 815 aaKnown RBP eCLIP28.2■■■□□ 2.12e-7■□□□□ 11
DHFR-203ENST00000505337 FUSP35637 526 aaKnown RBP eCLIP15.36■□□□□ 0.052e-7■■■■■ 30.8
DHFR-203ENST00000505337 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.44■□□□□ 0.74e-7■■□□□ 13.7
DHFR-203ENST00000505337 UPF1Q92900 1129 aaKnown RBP eCLIP31.39■■■□□ 2.621e-6■■□□□ 13.6
DHFR-203ENST00000505337 NOLC1Q14978 699 aaKnown RBP eCLIP27.69■■■□□ 2.021e-6■■■■□ 20.6
DHFR-203ENST00000505337 SAFBQ15424 915 aaKnown RBP eCLIP28.45■■■□□ 2.141e-6■■■■□ 20.9
DHFR-203ENST00000505337 PABPN1Q86U42 306 aaKnown RBP eCLIP44.98■■■■■ 4.791e-6■■■■■ 27.9
DHFR-203ENST00000505337 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.13■■□□□ 1.771e-6■■□□□ 14
DHFR-203ENST00000505337 RPS11P62280 158 aaKnown RBP eCLIP22.11■■□□□ 1.132e-6■■■■□ 23.8
DHFR-203ENST00000505337 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.69■■□□□ 1.222e-6■■■□□ 15
DHFR-203ENST00000505337 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.94■■■□□ 2.062e-6■■□□□ 13.2
DHFR-203ENST00000505337 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.32■■□□□ 1.82e-6■■■□□ 15
DHFR-203ENST00000505337 HNRNPLP14866 589 aaKnown RBP eCLIP24.44■■□□□ 1.53e-6■■■□□ 17.7
DHFR-203ENST00000505337 PUS1Q9Y606 427 aaKnown RBP eCLIP19.68■□□□□ 0.743e-6■□□□□ 9.1
DHFR-203ENST00000505337 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.65■■□□□ 1.383e-6■□□□□ 8.6
DHFR-203ENST00000505337 HNRNPUQ00839 825 aaKnown RBP eCLIP33.59■■■□□ 2.976e-6■■■■□ 19.8
DHFR-203ENST00000505337 WDR43Q15061 677 aaKnown RBP eCLIP32.88■■■□□ 2.857e-6■■■■■ 27.3
Retrieved 52 of 52 RNA–protein pairs in 12.2 ms