RNA–Protein interactions for RNA: ENSMUST00000026072.3

Trub1-201, Transcript of Probable tRNA pseudouridine synthase 1, mousemouse

TSL 1 (best) BASIC

Gene Trub1, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1-201ENSMUST00000026072 BlmO88700 1416 aa11.09□□□□□ -0.63
Trub1-201ENSMUST00000026072 Aplp2Q06335 707 aa11.08□□□□□ -0.64
Trub1-201ENSMUST00000026072 Ccdc88bQ4QRL3 1481 aa11.06□□□□□ -0.64
Trub1-201ENSMUST00000026072 Wdr43Q6ZQL4 677 aaKnown RBP11.05□□□□□ -0.64
Trub1-201ENSMUST00000026072 P3h3Q8CG70 732 aa11.03□□□□□ -0.64
Trub1-201ENSMUST00000026072 Rgl3Q3UYI5 709 aa11.02□□□□□ -0.65
Trub1-201ENSMUST00000026072 Trim26Q99PN3 545 aa11□□□□□ -0.65
Trub1-201ENSMUST00000026072 Kif15Q6P9L6 1387 aa10.99□□□□□ -0.65
Trub1-201ENSMUST00000026072 ScribQ80U72 1612 aa10.99□□□□□ -0.65
Trub1-201ENSMUST00000026072 Setd5Q5XJV7 1441 aa10.98□□□□□ -0.65
Trub1-201ENSMUST00000026072 Vsig10D3YX43 558 aa10.98□□□□□ -0.65
Trub1-201ENSMUST00000026072 Hdac5Q9Z2V6 1113 aa10.97□□□□□ -0.65
Trub1-201ENSMUST00000026072 Cecr2E9Q2Z1 1453 aa10.96□□□□□ -0.65
Trub1-201ENSMUST00000026072 1700123L14RikQ3V2K7 440 aa10.96□□□□□ -0.65
Trub1-201ENSMUST00000026072 Ythdc1E9Q5K9 736 aaKnown RBP10.96□□□□□ -0.66
Trub1-201ENSMUST00000026072 Upf2A2AT37 1269 aaKnown RBP10.95□□□□□ -0.66
Trub1-201ENSMUST00000026072 Grwd1Q810D6 446 aaKnown RBP10.95□□□□□ -0.66
Trub1-201ENSMUST00000026072 Kdm2aP59997 1161 aa10.92□□□□□ -0.66
Trub1-201ENSMUST00000026072 Sycp2Q9CUU3 1500 aa10.92□□□□□ -0.66
Trub1-201ENSMUST00000026072 Trim30dE9PWL0 497 aa10.91□□□□□ -0.66
Trub1-201ENSMUST00000026072 Clstn2Q9ER65 966 aa10.91□□□□□ -0.66
Trub1-201ENSMUST00000026072 DekQ7TNV0 380 aaKnown RBP10.9□□□□□ -0.66
Trub1-201ENSMUST00000026072 Apbb1Q9QXJ1 710 aa10.9□□□□□ -0.66
Trub1-201ENSMUST00000026072 Arid4bA2CG63 1314 aaKnown RBP10.9□□□□□ -0.66
Trub1-201ENSMUST00000026072 Ofd1Q80Z25 1017 aa10.9□□□□□ -0.66
Trub1-201ENSMUST00000026072 Fam71e1A1L3C1 212 aa10.89□□□□□ -0.67
Trub1-201ENSMUST00000026072 CanxP35564 591 aaKnown RBP10.89□□□□□ -0.67
Trub1-201ENSMUST00000026072 Irx6Q9ER75 438 aa10.89□□□□□ -0.67
Trub1-201ENSMUST00000026072 Fgd1P52734 960 aa10.86□□□□□ -0.67
Trub1-201ENSMUST00000026072 Lmod3E9QA62 571 aa10.86□□□□□ -0.67
Trub1-201ENSMUST00000026072 Safb2Q80YR5 991 aaKnown RBP10.84□□□□□ -0.67
Trub1-201ENSMUST00000026072 Neurod2Q62414 383 aa10.83□□□□□ -0.68
Trub1-201ENSMUST00000026072 SafbD3YXK2 937 aaKnown RBP10.83□□□□□ -0.68
Trub1-201ENSMUST00000026072 CftrP26361 1476 aa10.83□□□□□ -0.68
Trub1-201ENSMUST00000026072 Eea1Q8BL66 1411 aa10.83□□□□□ -0.68
Trub1-201ENSMUST00000026072 Hsp90ab1P11499 724 aaKnown RBP10.82□□□□□ -0.68
Trub1-201ENSMUST00000026072 Mroh3A0A1D5RM54 893 aa10.81□□□□□ -0.68
Trub1-201ENSMUST00000026072 Cep162Q6ZQ06 1403 aa10.8□□□□□ -0.68
Trub1-201ENSMUST00000026072 Smarca2Q6DIC0 1577 aa10.8□□□□□ -0.68
Trub1-201ENSMUST00000026072 Hsp90aa1P07901 733 aaKnown RBP10.79□□□□□ -0.68
Trub1-201ENSMUST00000026072 Card11Q8CIS0 1159 aa10.79□□□□□ -0.68
Trub1-201ENSMUST00000026072 CatipB9EKE5 520 aa10.78□□□□□ -0.68
Trub1-201ENSMUST00000026072 Wwc2Q6NXJ0 1187 aa10.78□□□□□ -0.68
Trub1-201ENSMUST00000026072 Dbr1Q923B1 550 aa10.77□□□□□ -0.68
Trub1-201ENSMUST00000026072 Arhgap27A2AB59 869 aa10.77□□□□□ -0.69
Trub1-201ENSMUST00000026072 Hspa5P20029 655 aaKnown RBP10.77□□□□□ -0.69
Trub1-201ENSMUST00000026072 Slc4a3P16283 1227 aa10.77□□□□□ -0.69
Trub1-201ENSMUST00000026072 Crybg2B7ZCC2 1516 aa10.77□□□□□ -0.69
Trub1-201ENSMUST00000026072 Rrp7aQ9D1C9 280 aaKnown RBP10.75□□□□□ -0.69
Trub1-201ENSMUST00000026072 Ercc6F8VPZ5 1481 aa10.75□□□□□ -0.69
Trub1-201ENSMUST00000026072 Synj1Q8CHC4 1574 aa10.75□□□□□ -0.69
Trub1-201ENSMUST00000026072 Ccdc18Q640L5 1455 aa10.75□□□□□ -0.69
Trub1-201ENSMUST00000026072 Gm20521D3Z5F7 333 aa10.75□□□□□ -0.69
Trub1-201ENSMUST00000026072 Exosc9Q9JHI7 438 aaKnown RBP10.75□□□□□ -0.69
Trub1-201ENSMUST00000026072 Srpk2O54781 681 aaKnown RBP10.74□□□□□ -0.69
Trub1-201ENSMUST00000026072 Ecm2Q5FW85 670 aa10.74□□□□□ -0.69
Trub1-201ENSMUST00000026072 Armcx1Q9CX83 456 aa10.74□□□□□ -0.69
Trub1-201ENSMUST00000026072 Trim44Q9QXA7 346 aa10.74□□□□□ -0.69
Trub1-201ENSMUST00000026072 Fmn1Q05860 1466 aa10.73□□□□□ -0.69
Trub1-201ENSMUST00000026072 1700019A02RikA0A087WPV9 146 aa10.73□□□□□ -0.69
Trub1-201ENSMUST00000026072 B4galnt3Q6L8S8 986 aa10.73□□□□□ -0.69
Trub1-201ENSMUST00000026072 Gm6268A2A3U9 297 aa10.72□□□□□ -0.69
Trub1-201ENSMUST00000026072 Cnga1P29974 684 aa10.72□□□□□ -0.69
Trub1-201ENSMUST00000026072 Stk24Q99KH8 431 aa10.72□□□□□ -0.69
Trub1-201ENSMUST00000026072 NgefQ8CHT1 710 aa10.71□□□□□ -0.69
Trub1-201ENSMUST00000026072 Plcb2A3KGF7 1181 aa10.71□□□□□ -0.69
Trub1-201ENSMUST00000026072 IqubQ8CDK3 788 aa10.71□□□□□ -0.7
Trub1-201ENSMUST00000026072 Spryd3E9Q9B3 442 aa10.7□□□□□ -0.7
Trub1-201ENSMUST00000026072 Rtn4Q99P72 1162 aaKnown RBP10.7□□□□□ -0.7
Trub1-201ENSMUST00000026072 Pds5bQ4VA53 1446 aaKnown RBP10.7□□□□□ -0.7
Trub1-201ENSMUST00000026072 Sin3aQ60520 1274 aaKnown RBP10.7□□□□□ -0.7
Trub1-201ENSMUST00000026072 Rapgef2Q8CHG7 1496 aa10.7□□□□□ -0.7
Trub1-201ENSMUST00000026072 Cwc22Q8C5N3 908 aaKnown RBP10.67□□□□□ -0.7
Trub1-201ENSMUST00000026072 Mapk8ip3Q9ESN9 1337 aa10.67□□□□□ -0.7
Trub1-201ENSMUST00000026072 Mtus2Q3UHD3 1353 aa10.65□□□□□ -0.7
Trub1-201ENSMUST00000026072 PtmaP26350 111 aa10.65□□□□□ -0.71
Trub1-201ENSMUST00000026072 Stag3O70576 1240 aa10.63□□□□□ -0.71
Trub1-201ENSMUST00000026072 Ccdc9Q8VC31 543 aaKnown RBP10.63□□□□□ -0.71
Trub1-201ENSMUST00000026072 Ccdc27Q3V036 639 aa10.63□□□□□ -0.71
Trub1-201ENSMUST00000026072 Aebp1Q640N1 1128 aa10.63□□□□□ -0.71
Trub1-201ENSMUST00000026072 Plin1Q8CGN5 517 aa10.62□□□□□ -0.71
Trub1-201ENSMUST00000026072 Pkd2O35245 966 aa10.62□□□□□ -0.71
Trub1-201ENSMUST00000026072 Ppm1gQ61074 542 aa10.61□□□□□ -0.71
Trub1-201ENSMUST00000026072 Htatsf1Q8BGC0 757 aa10.61□□□□□ -0.71
Trub1-201ENSMUST00000026072 Cux2P70298 1426 aa10.6□□□□□ -0.71
Trub1-201ENSMUST00000026072 Exoc6Q8R313 802 aa10.6□□□□□ -0.71
Trub1-201ENSMUST00000026072 Rundc1Q0VDN7 615 aa10.59□□□□□ -0.71
Trub1-201ENSMUST00000026072 Chmp5Q9D7S9 219 aa10.59□□□□□ -0.71
Trub1-201ENSMUST00000026072 Map4P27546 1125 aaKnown RBP10.59□□□□□ -0.71
Trub1-201ENSMUST00000026072 MyclP10166 368 aa10.58□□□□□ -0.72
Trub1-201ENSMUST00000026072 Supt16hQ920B9 1047 aa10.58□□□□□ -0.72
Trub1-201ENSMUST00000026072 Arid3cA6PWV5 409 aa10.57□□□□□ -0.72
Trub1-201ENSMUST00000026072 Trak1Q6PD31 939 aa10.57□□□□□ -0.72
Trub1-201ENSMUST00000026072 Atad2bE9Q166 1460 aaKnown RBP10.57□□□□□ -0.72
Trub1-201ENSMUST00000026072 Baz1bQ9Z277 1479 aa10.57□□□□□ -0.72
Trub1-201ENSMUST00000026072 Rwdd1Q9CQK7 243 aa10.57□□□□□ -0.72
Trub1-201ENSMUST00000026072 Clstn1Q9EPL2 979 aa10.57□□□□□ -0.72
Trub1-201ENSMUST00000026072 Speer4f1Q9D5Q6 258 aa10.56□□□□□ -0.72
Trub1-201ENSMUST00000026072 Senp3Q9EP97 568 aaKnown RBP10.56□□□□□ -0.72
Trub1-201ENSMUST00000026072 Cabp1Q9JLK7 227 aa10.56□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms