RNA–Protein interactions for RNA: ENSMUST00000026072.3

Trub1-201, Transcript of Probable tRNA pseudouridine synthase 1, mousemouse

TSL 1 (best) BASIC

Gene Trub1, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1-201ENSMUST00000026072 Rhox8Q6VSS7 320 aa14.77□□□□□ -0.05
Trub1-201ENSMUST00000026072 Ehmt2Q9Z148 1263 aaKnown RBP13.48□□□□□ -0.25
Trub1-201ENSMUST00000026072 NischQ80TM9 1593 aa13.17□□□□□ -0.3
Trub1-201ENSMUST00000026072 Rpgrip1Q9EPQ2 1331 aa13.16□□□□□ -0.3
Trub1-201ENSMUST00000026072 Ccdc136Q3TVA9 1136 aa13.14□□□□□ -0.31
Trub1-201ENSMUST00000026072 Cngb1E1AZ71 1325 aa12.91□□□□□ -0.34
Trub1-201ENSMUST00000026072 Gab3Q8BSM5 595 aa12.91□□□□□ -0.34
Trub1-201ENSMUST00000026072 Esf1Q3V1V3 845 aaKnown RBP12.91□□□□□ -0.34
Trub1-201ENSMUST00000026072 Wdr66E9Q743 1299 aa12.9□□□□□ -0.34
Trub1-201ENSMUST00000026072 Zeb1Q64318 1117 aa12.85□□□□□ -0.35
Trub1-201ENSMUST00000026072 Ube2uB1AUC4 352 aa12.77□□□□□ -0.36
Trub1-201ENSMUST00000026072 Las1lA2BE28 776 aaKnown RBP12.75□□□□□ -0.37
Trub1-201ENSMUST00000026072 Trim41Q5NCC3 630 aa12.7□□□□□ -0.38
Trub1-201ENSMUST00000026072 Myt1lP97500 1187 aa12.66□□□□□ -0.38
Trub1-201ENSMUST00000026072 Npm2Q80W85 207 aa12.63□□□□□ -0.39
Trub1-201ENSMUST00000026072 UbtfP25976 765 aaKnown RBP12.41□□□□□ -0.42
Trub1-201ENSMUST00000026072 Abcc9P70170 1546 aa12.39□□□□□ -0.43
Trub1-201ENSMUST00000026072 Pelp1Q9DBD5 1123 aaKnown RBP12.36□□□□□ -0.43
Trub1-201ENSMUST00000026072 Acin1Q9JIX8 1338 aaKnown RBP12.34□□□□□ -0.43
Trub1-201ENSMUST00000026072 Slc24a1Q91WD8 1130 aa12.3□□□□□ -0.44
Trub1-201ENSMUST00000026072 NefmP08553 848 aa12.22□□□□□ -0.45
Trub1-201ENSMUST00000026072 Il27Q8K3I6 234 aa12.2□□□□□ -0.46
Trub1-201ENSMUST00000026072 CenpbP27790 599 aa12.18□□□□□ -0.46
Trub1-201ENSMUST00000026072 Abcc8B2RUS7 1588 aa12.18□□□□□ -0.46
Trub1-201ENSMUST00000026072 Ppargc1bQ8VHJ7 1014 aa12.14□□□□□ -0.47
Trub1-201ENSMUST00000026072 Amer1Q7TS75 1132 aa12.12□□□□□ -0.47
Trub1-201ENSMUST00000026072 Pcgf6Q99NA9 353 aa12.06□□□□□ -0.48
Trub1-201ENSMUST00000026072 Gm35339A0A140LHH9 1649 aa12.06□□□□□ -0.48
Trub1-201ENSMUST00000026072 Zcchc6Q5BLK4 1491 aaKnown RBP12.03□□□□□ -0.48
Trub1-201ENSMUST00000026072 HrcG5E8J6 738 aa12.02□□□□□ -0.48
Trub1-201ENSMUST00000026072 Cdk11bP24788 784 aaKnown RBP12.02□□□□□ -0.49
Trub1-201ENSMUST00000026072 Stra8P70278 393 aa12.01□□□□□ -0.49
Trub1-201ENSMUST00000026072 Fam50aQ9WV03 339 aaKnown RBP12.01□□□□□ -0.49
Trub1-201ENSMUST00000026072 Ap3b1Q9Z1T1 1105 aa12.01□□□□□ -0.49
Trub1-201ENSMUST00000026072 Neurod1Q60867 357 aa12.01□□□□□ -0.49
Trub1-201ENSMUST00000026072 Ccdc180J3QNE4 1664 aa11.99□□□□□ -0.49
Trub1-201ENSMUST00000026072 Ttbk1Q6PCN3 1308 aa11.94□□□□□ -0.5
Trub1-201ENSMUST00000026072 NclP09405 707 aaKnown RBP11.91□□□□□ -0.5
Trub1-201ENSMUST00000026072 Nop58Q6DFW4 536 aaKnown RBP11.91□□□□□ -0.5
Trub1-201ENSMUST00000026072 Supt5hO55201 1082 aaKnown RBP11.89□□□□□ -0.51
Trub1-201ENSMUST00000026072 Eif5bQ05D44 1216 aaKnown RBP11.86□□□□□ -0.51
Trub1-201ENSMUST00000026072 NrdcQ8BHG1 1161 aa11.85□□□□□ -0.51
Trub1-201ENSMUST00000026072 Rtl1Q7M732 1744 aa11.79□□□□□ -0.52
Trub1-201ENSMUST00000026072 Os9Q8K2C7 672 aa11.76□□□□□ -0.53
Trub1-201ENSMUST00000026072 Anp32bQ9EST5 272 aaKnown RBP11.75□□□□□ -0.53
Trub1-201ENSMUST00000026072 Mier1Q5UAK0 511 aa11.74□□□□□ -0.53
Trub1-201ENSMUST00000026072 TonslQ6NZL6 1363 aa11.72□□□□□ -0.53
Trub1-201ENSMUST00000026072 4933416C03RikQ3V063 378 aa11.72□□□□□ -0.53
Trub1-201ENSMUST00000026072 Zbtb7cQ8VCZ7 619 aa11.71□□□□□ -0.53
Trub1-201ENSMUST00000026072 Lmod2Q3UHZ5 550 aa11.7□□□□□ -0.54
Trub1-201ENSMUST00000026072 Tnnt3Q9QZ47 272 aa11.69□□□□□ -0.54
Trub1-201ENSMUST00000026072 NeflP08551 543 aa11.68□□□□□ -0.54
Trub1-201ENSMUST00000026072 Plekhg3Q4VAC9 1341 aa11.67□□□□□ -0.54
Trub1-201ENSMUST00000026072 Mapk8ip2Q9ERE9 830 aa11.64□□□□□ -0.55
Trub1-201ENSMUST00000026072 Chic1Q8CBW7 227 aa11.62□□□□□ -0.55
Trub1-201ENSMUST00000026072 Zbtb4Q5F293 982 aa11.6□□□□□ -0.55
Trub1-201ENSMUST00000026072 Eid3Q3V124 375 aa11.6□□□□□ -0.55
Trub1-201ENSMUST00000026072 Hnrnpul2Q00PI9 745 aaKnown RBP11.56□□□□□ -0.56
Trub1-201ENSMUST00000026072 Rb1cc1Q9ESK9 1588 aa11.55□□□□□ -0.56
Trub1-201ENSMUST00000026072 Dcaf1Q80TR8 1506 aa11.52□□□□□ -0.56
Trub1-201ENSMUST00000026072 Npm1Q61937 292 aaKnown RBP11.52□□□□□ -0.57
Trub1-201ENSMUST00000026072 Gm38655A0A286YDK6 273 aa11.52□□□□□ -0.57
Trub1-201ENSMUST00000026072 Ifnlr1Q8CGK5 535 aa11.51□□□□□ -0.57
Trub1-201ENSMUST00000026072 4930567H17RikQ3V0K5 233 aa11.49□□□□□ -0.57
Trub1-201ENSMUST00000026072 Prdm10Q3UTQ7 1184 aa11.49□□□□□ -0.57
Trub1-201ENSMUST00000026072 ClspnQ80YR7 1315 aa11.47□□□□□ -0.57
Trub1-201ENSMUST00000026072 Myt1Q8CFC2 1127 aa11.47□□□□□ -0.57
Trub1-201ENSMUST00000026072 Sall2Q9QX96 1004 aa11.45□□□□□ -0.58
Trub1-201ENSMUST00000026072 Fkbp15Q6P9Q6 1216 aaKnown RBP11.4□□□□□ -0.58
Trub1-201ENSMUST00000026072 Erich6D3Z6S9 713 aa11.4□□□□□ -0.58
Trub1-201ENSMUST00000026072 Brd4Q9ESU6 1400 aaKnown RBP11.39□□□□□ -0.59
Trub1-201ENSMUST00000026072 Cep164Q5DU05 1446 aa11.38□□□□□ -0.59
Trub1-201ENSMUST00000026072 DaxxO35613 739 aa11.37□□□□□ -0.59
Trub1-201ENSMUST00000026072 Gm13697A2AK42 830 aa11.36□□□□□ -0.59
Trub1-201ENSMUST00000026072 Csrnp3P59055 597 aa11.35□□□□□ -0.59
Trub1-201ENSMUST00000026072 NacadQ5SWP3 1504 aa11.34□□□□□ -0.59
Trub1-201ENSMUST00000026072 Atp1b4Q99ME6 356 aa11.34□□□□□ -0.59
Trub1-201ENSMUST00000026072 ArxO35085 564 aa11.33□□□□□ -0.6
Trub1-201ENSMUST00000026072 Polr3glQ8R0C0 218 aa11.33□□□□□ -0.6
Trub1-201ENSMUST00000026072 Anp32aO35381 247 aa11.32□□□□□ -0.6
Trub1-201ENSMUST00000026072 Clip1Q922J3 1391 aa11.3□□□□□ -0.6
Trub1-201ENSMUST00000026072 Baz1aO88379 1555 aa11.28□□□□□ -0.6
Trub1-201ENSMUST00000026072 Nlrp6Q91WS2 869 aa11.28□□□□□ -0.6
Trub1-201ENSMUST00000026072 Rtl5Q5DTT4 599 aa11.27□□□□□ -0.61
Trub1-201ENSMUST00000026072 Kdm5dQ62240 1548 aa11.26□□□□□ -0.61
Trub1-201ENSMUST00000026072 Rangap1P46061 589 aaKnown RBP11.26□□□□□ -0.61
Trub1-201ENSMUST00000026072 Plppr3Q7TPB0 716 aa11.25□□□□□ -0.61
Trub1-201ENSMUST00000026072 Chic2Q9D9G3 165 aa11.24□□□□□ -0.61
Trub1-201ENSMUST00000026072 Anks4bQ8K3X6 423 aa11.22□□□□□ -0.61
Trub1-201ENSMUST00000026072 Gm13695A2AK44 830 aa11.2□□□□□ -0.62
Trub1-201ENSMUST00000026072 Rad21Q61550 635 aaKnown RBP11.18□□□□□ -0.62
Trub1-201ENSMUST00000026072 Mrs2Q5NCE8 434 aa11.18□□□□□ -0.62
Trub1-201ENSMUST00000026072 Rsf1E9PWW9 1441 aaKnown RBP11.18□□□□□ -0.62
Trub1-201ENSMUST00000026072 Ppp4r2Q0VGB7 417 aa11.18□□□□□ -0.62
Trub1-201ENSMUST00000026072 DiexfQ8BTT6 772 aaKnown RBP11.16□□□□□ -0.62
Trub1-201ENSMUST00000026072 Calr4Q3TQS0 420 aa11.15□□□□□ -0.62
Trub1-201ENSMUST00000026072 Ubl4bQ9CQ84 188 aa11.14□□□□□ -0.63
Trub1-201ENSMUST00000026072 Golga3P55937 1487 aa11.13□□□□□ -0.63
Trub1-201ENSMUST00000026072 Ccer2J3QPU5 274 aa11.09□□□□□ -0.63
Trub1-201ENSMUST00000026072 Aebp2Q9Z248 504 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms