RNA–Protein interactions for RNA: ENSMUST00000025279.5

Npc1-201, Transcript of Niemann-Pick C1 protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Npc1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1-201ENSMUST00000025279 Bcl11aQ9QYE3 773 aa17.26■□□□□ 0.35
Npc1-201ENSMUST00000025279 BlmO88700 1416 aa17.23■□□□□ 0.35
Npc1-201ENSMUST00000025279 CatipB9EKE5 520 aa17.19■□□□□ 0.34
Npc1-201ENSMUST00000025279 DekQ7TNV0 380 aaKnown RBP17.17■□□□□ 0.34
Npc1-201ENSMUST00000025279 Ythdc1E9Q5K9 736 aaKnown RBP17.15■□□□□ 0.34
Npc1-201ENSMUST00000025279 Vsig10D3YX43 558 aa17.14■□□□□ 0.33
Npc1-201ENSMUST00000025279 CanxP35564 591 aaKnown RBP17.14■□□□□ 0.33
Npc1-201ENSMUST00000025279 Clstn2Q9ER65 966 aa17.13■□□□□ 0.33
Npc1-201ENSMUST00000025279 Lmod3E9QA62 571 aa17.11■□□□□ 0.33
Npc1-201ENSMUST00000025279 Ccdc27Q3V036 639 aa17.1■□□□□ 0.33
Npc1-201ENSMUST00000025279 Plppr3Q7TPB0 716 aa17.09■□□□□ 0.33
Npc1-201ENSMUST00000025279 Ubl4bQ9CQ84 188 aa17.09■□□□□ 0.33
Npc1-201ENSMUST00000025279 Trim30dE9PWL0 497 aa17.09■□□□□ 0.33
Npc1-201ENSMUST00000025279 Trim26Q99PN3 545 aa17.08■□□□□ 0.32
Npc1-201ENSMUST00000025279 SafbD3YXK2 937 aaKnown RBP17.07■□□□□ 0.32
Npc1-201ENSMUST00000025279 Hsp90ab1P11499 724 aaKnown RBP17.07■□□□□ 0.32
Npc1-201ENSMUST00000025279 Fgd1P52734 960 aa17.07■□□□□ 0.32
Npc1-201ENSMUST00000025279 Setd5Q5XJV7 1441 aa17.07■□□□□ 0.32
Npc1-201ENSMUST00000025279 Rgl3Q3UYI5 709 aa17.07■□□□□ 0.32
Npc1-201ENSMUST00000025279 P3h3Q8CG70 732 aa17.07■□□□□ 0.32
Npc1-201ENSMUST00000025279 Ofd1Q80Z25 1017 aa17.06■□□□□ 0.32
Npc1-201ENSMUST00000025279 Trim44Q9QXA7 346 aa17.06■□□□□ 0.32
Npc1-201ENSMUST00000025279 Rb1cc1Q9ESK9 1588 aa16.98■□□□□ 0.31
Npc1-201ENSMUST00000025279 Arid4bA2CG63 1314 aaKnown RBP16.95■□□□□ 0.3
Npc1-201ENSMUST00000025279 Irx3P81067 507 aa16.92■□□□□ 0.3
Npc1-201ENSMUST00000025279 Apbb1Q9QXJ1 710 aa16.91■□□□□ 0.3
Npc1-201ENSMUST00000025279 Grwd1Q810D6 446 aaKnown RBP16.91■□□□□ 0.3
Npc1-201ENSMUST00000025279 PtmaP26350 111 aa16.88■□□□□ 0.29
Npc1-201ENSMUST00000025279 Htatsf1Q8BGC0 757 aa16.88■□□□□ 0.29
Npc1-201ENSMUST00000025279 Plcb2A3KGF7 1181 aa16.87■□□□□ 0.29
Npc1-201ENSMUST00000025279 Kdm2aP59997 1161 aa16.87■□□□□ 0.29
Npc1-201ENSMUST00000025279 Card11Q8CIS0 1159 aa16.86■□□□□ 0.29
Npc1-201ENSMUST00000025279 Neurod2Q62414 383 aa16.83■□□□□ 0.29
Npc1-201ENSMUST00000025279 Ppm1gQ61074 542 aa16.83■□□□□ 0.28
Npc1-201ENSMUST00000025279 Irx6Q9ER75 438 aa16.83■□□□□ 0.28
Npc1-201ENSMUST00000025279 Cwc22Q8C5N3 908 aaKnown RBP16.82■□□□□ 0.28
Npc1-201ENSMUST00000025279 Safb2Q80YR5 991 aaKnown RBP16.81■□□□□ 0.28
Npc1-201ENSMUST00000025279 Eea1Q8BL66 1411 aa16.8■□□□□ 0.28
Npc1-201ENSMUST00000025279 Mroh3A0A1D5RM54 893 aa16.79■□□□□ 0.28
Npc1-201ENSMUST00000025279 IqubQ8CDK3 788 aa16.78■□□□□ 0.28
Npc1-201ENSMUST00000025279 Dbr1Q923B1 550 aa16.78■□□□□ 0.28
Npc1-201ENSMUST00000025279 Golga3P55937 1487 aa16.78■□□□□ 0.28
Npc1-201ENSMUST00000025279 Srpk2O54781 681 aaKnown RBP16.77■□□□□ 0.27
Npc1-201ENSMUST00000025279 Mapk8ip3Q9ESN9 1337 aa16.74■□□□□ 0.27
Npc1-201ENSMUST00000025279 Gm20521D3Z5F7 333 aa16.73■□□□□ 0.27
Npc1-201ENSMUST00000025279 Exosc9Q9JHI7 438 aaKnown RBP16.73■□□□□ 0.27
Npc1-201ENSMUST00000025279 Slc4a3P16283 1227 aa16.73■□□□□ 0.27
Npc1-201ENSMUST00000025279 B4galnt3Q6L8S8 986 aa16.73■□□□□ 0.27
Npc1-201ENSMUST00000025279 Supt16hQ920B9 1047 aa16.72■□□□□ 0.27
Npc1-201ENSMUST00000025279 Kif15Q6P9L6 1387 aa16.71■□□□□ 0.27
Npc1-201ENSMUST00000025279 Armcx1Q9CX83 456 aa16.7■□□□□ 0.26
Npc1-201ENSMUST00000025279 Spryd3E9Q9B3 442 aa16.7■□□□□ 0.26
Npc1-201ENSMUST00000025279 Gm6268A2A3U9 297 aa16.7■□□□□ 0.26
Npc1-201ENSMUST00000025279 Wwc2Q6NXJ0 1187 aa16.69■□□□□ 0.26
Npc1-201ENSMUST00000025279 Tcerg1Q8CGF7 1100 aaKnown RBP16.68■□□□□ 0.26
Npc1-201ENSMUST00000025279 Map7O88735 730 aa16.68■□□□□ 0.26
Npc1-201ENSMUST00000025279 Rsf1E9PWW9 1441 aaKnown RBP16.68■□□□□ 0.26
Npc1-201ENSMUST00000025279 AU015836B2RUM3 263 aa16.67■□□□□ 0.26
Npc1-201ENSMUST00000025279 Hspa5P20029 655 aaKnown RBP16.65■□□□□ 0.26
Npc1-201ENSMUST00000025279 Rrp7aQ9D1C9 280 aaKnown RBP16.65■□□□□ 0.26
Npc1-201ENSMUST00000025279 Chmp4bQ9D8B3 224 aaKnown RBP16.65■□□□□ 0.26
Npc1-201ENSMUST00000025279 Mtus2Q3UHD3 1353 aa16.64■□□□□ 0.25
Npc1-201ENSMUST00000025279 Arhgap27A2AB59 869 aa16.63■□□□□ 0.25
Npc1-201ENSMUST00000025279 Casc1Q6TDU8 730 aa16.63■□□□□ 0.25
Npc1-201ENSMUST00000025279 Mia2Q91ZV0 1396 aa16.62■□□□□ 0.25
Npc1-201ENSMUST00000025279 Znf326O88291 580 aa16.61■□□□□ 0.25
Npc1-201ENSMUST00000025279 NudcO35685 332 aaKnown RBP16.6■□□□□ 0.25
Npc1-201ENSMUST00000025279 Rwdd1Q9CQK7 243 aa16.6■□□□□ 0.25
Npc1-201ENSMUST00000025279 1700019A02RikA0A087WPV9 146 aa16.6■□□□□ 0.25
Npc1-201ENSMUST00000025279 Mbd3Q9Z2D8 285 aaKnown RBP16.59■□□□□ 0.25
Npc1-201ENSMUST00000025279 Stk24Q99KH8 431 aa16.58■□□□□ 0.25
Npc1-201ENSMUST00000025279 Stag3O70576 1240 aa16.58■□□□□ 0.24
Npc1-201ENSMUST00000025279 PnnO35691 725 aaKnown RBP16.56■□□□□ 0.24
Npc1-201ENSMUST00000025279 Hsp90b1P08113 802 aaKnown RBP16.56■□□□□ 0.24
Npc1-201ENSMUST00000025279 Ccdc18Q640L5 1455 aa16.56■□□□□ 0.24
Npc1-201ENSMUST00000025279 Ipo9Q91YE6 1041 aa16.56■□□□□ 0.24
Npc1-201ENSMUST00000025279 Chmp5Q9D7S9 219 aa16.56■□□□□ 0.24
Npc1-201ENSMUST00000025279 Iqcf3Q9D498 203 aa16.56■□□□□ 0.24
Npc1-201ENSMUST00000025279 Pes1Q9EQ61 584 aaKnown RBP16.55■□□□□ 0.24
Npc1-201ENSMUST00000025279 Cnga1P29974 684 aa16.55■□□□□ 0.24
Npc1-201ENSMUST00000025279 KnstrnQ9D9Z1 312 aaKnown RBP16.55■□□□□ 0.24
Npc1-201ENSMUST00000025279 Dnttip2Q8R2M2 758 aaKnown RBP16.54■□□□□ 0.24
Npc1-201ENSMUST00000025279 Rtn4Q99P72 1162 aaKnown RBP16.54■□□□□ 0.24
Npc1-201ENSMUST00000025279 NacadQ5SWP3 1504 aa16.54■□□□□ 0.24
Npc1-201ENSMUST00000025279 Baz1aO88379 1555 aa16.53■□□□□ 0.24
Npc1-201ENSMUST00000025279 NgefQ8CHT1 710 aa16.53■□□□□ 0.24
Npc1-201ENSMUST00000025279 Dnai1Q8C0M8 701 aa16.52■□□□□ 0.24
Npc1-201ENSMUST00000025279 Nolc1E9Q5C9 702 aaKnown RBP16.51■□□□□ 0.23
Npc1-201ENSMUST00000025279 Adam1bQ8R534 806 aa16.51■□□□□ 0.23
Npc1-201ENSMUST00000025279 Exoc6Q8R313 802 aa16.5■□□□□ 0.23
Npc1-201ENSMUST00000025279 Sin3aQ60520 1274 aaKnown RBP16.49■□□□□ 0.23
Npc1-201ENSMUST00000025279 Pkd2O35245 966 aa16.48■□□□□ 0.23
Npc1-201ENSMUST00000025279 Rundc1Q0VDN7 615 aa16.48■□□□□ 0.23
Npc1-201ENSMUST00000025279 Speer4f1Q9D5Q6 258 aa16.48■□□□□ 0.23
Npc1-201ENSMUST00000025279 Gtf3c3Q3TMP1 882 aa16.48■□□□□ 0.23
Npc1-201ENSMUST00000025279 Erich6bQ9D4S6 220 aa16.47■□□□□ 0.23
Npc1-201ENSMUST00000025279 Zfp777B9EKF4 885 aa16.47■□□□□ 0.23
Npc1-201ENSMUST00000025279 MccE9PWI3 1003 aa16.46■□□□□ 0.23
Npc1-201ENSMUST00000025279 EspnQ9ET47 871 aa16.45■□□□□ 0.22
Npc1-201ENSMUST00000025279 HnrnpuQ8VEK3 800 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms