RNA–Protein interactions for RNA: ENSMUST00000025279.5

Npc1-201, Transcript of Niemann-Pick C1 protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Npc1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1-201ENSMUST00000025279 Rhox8Q6VSS7 320 aa22.85■■□□□ 1.25
Npc1-201ENSMUST00000025279 Rpgrip1Q9EPQ2 1331 aa21.28■■□□□ 1
Npc1-201ENSMUST00000025279 Ehmt2Q9Z148 1263 aaKnown RBP20.77■□□□□ 0.92
Npc1-201ENSMUST00000025279 Las1lA2BE28 776 aaKnown RBP20.46■□□□□ 0.87
Npc1-201ENSMUST00000025279 Cngb1E1AZ71 1325 aa20.38■□□□□ 0.85
Npc1-201ENSMUST00000025279 Wdr66E9Q743 1299 aa20.23■□□□□ 0.83
Npc1-201ENSMUST00000025279 Ccdc136Q3TVA9 1136 aa20.2■□□□□ 0.82
Npc1-201ENSMUST00000025279 Zeb1Q64318 1117 aa20.04■□□□□ 0.8
Npc1-201ENSMUST00000025279 Esf1Q3V1V3 845 aaKnown RBP20■□□□□ 0.79
Npc1-201ENSMUST00000025279 Pelp1Q9DBD5 1123 aaKnown RBP19.92■□□□□ 0.78
Npc1-201ENSMUST00000025279 Gab3Q8BSM5 595 aa19.92■□□□□ 0.78
Npc1-201ENSMUST00000025279 Ube2uB1AUC4 352 aa19.89■□□□□ 0.77
Npc1-201ENSMUST00000025279 Acin1Q9JIX8 1338 aaKnown RBP19.71■□□□□ 0.75
Npc1-201ENSMUST00000025279 Trim41Q5NCC3 630 aa19.71■□□□□ 0.75
Npc1-201ENSMUST00000025279 Npm2Q80W85 207 aa19.65■□□□□ 0.74
Npc1-201ENSMUST00000025279 Myt1lP97500 1187 aa19.56■□□□□ 0.72
Npc1-201ENSMUST00000025279 CenpbP27790 599 aa19.51■□□□□ 0.71
Npc1-201ENSMUST00000025279 NefmP08553 848 aa19.33■□□□□ 0.68
Npc1-201ENSMUST00000025279 Pcgf6Q99NA9 353 aa19.28■□□□□ 0.68
Npc1-201ENSMUST00000025279 Amer1Q7TS75 1132 aa19.27■□□□□ 0.68
Npc1-201ENSMUST00000025279 UbtfP25976 765 aaKnown RBP19.26■□□□□ 0.67
Npc1-201ENSMUST00000025279 NischQ80TM9 1593 aa19.25■□□□□ 0.67
Npc1-201ENSMUST00000025279 Stra8P70278 393 aa19.15■□□□□ 0.66
Npc1-201ENSMUST00000025279 Slc24a1Q91WD8 1130 aa19.12■□□□□ 0.65
Npc1-201ENSMUST00000025279 Myt1Q8CFC2 1127 aa19.04■□□□□ 0.64
Npc1-201ENSMUST00000025279 Cdk11bP24788 784 aaKnown RBP18.96■□□□□ 0.63
Npc1-201ENSMUST00000025279 HrcG5E8J6 738 aa18.88■□□□□ 0.61
Npc1-201ENSMUST00000025279 Ccdc180J3QNE4 1664 aa18.86■□□□□ 0.61
Npc1-201ENSMUST00000025279 Supt5hO55201 1082 aaKnown RBP18.81■□□□□ 0.6
Npc1-201ENSMUST00000025279 Nop58Q6DFW4 536 aaKnown RBP18.75■□□□□ 0.59
Npc1-201ENSMUST00000025279 Ttbk1Q6PCN3 1308 aa18.74■□□□□ 0.59
Npc1-201ENSMUST00000025279 Il27Q8K3I6 234 aa18.73■□□□□ 0.59
Npc1-201ENSMUST00000025279 NrdcQ8BHG1 1161 aa18.66■□□□□ 0.58
Npc1-201ENSMUST00000025279 Tnnt3Q9QZ47 272 aa18.66■□□□□ 0.58
Npc1-201ENSMUST00000025279 Ppargc1bQ8VHJ7 1014 aa18.62■□□□□ 0.57
Npc1-201ENSMUST00000025279 Fam50aQ9WV03 339 aaKnown RBP18.62■□□□□ 0.57
Npc1-201ENSMUST00000025279 NclP09405 707 aaKnown RBP18.6■□□□□ 0.57
Npc1-201ENSMUST00000025279 4933416C03RikQ3V063 378 aa18.6■□□□□ 0.57
Npc1-201ENSMUST00000025279 Neurod1Q60867 357 aa18.58■□□□□ 0.57
Npc1-201ENSMUST00000025279 Anp32bQ9EST5 272 aaKnown RBP18.57■□□□□ 0.56
Npc1-201ENSMUST00000025279 Ap3b1Q9Z1T1 1105 aa18.55■□□□□ 0.56
Npc1-201ENSMUST00000025279 Eif5bQ05D44 1216 aaKnown RBP18.53■□□□□ 0.56
Npc1-201ENSMUST00000025279 4930567H17RikQ3V0K5 233 aa18.52■□□□□ 0.55
Npc1-201ENSMUST00000025279 NeflP08551 543 aa18.5■□□□□ 0.55
Npc1-201ENSMUST00000025279 Rtl1Q7M732 1744 aa18.49■□□□□ 0.55
Npc1-201ENSMUST00000025279 TonslQ6NZL6 1363 aa18.41■□□□□ 0.54
Npc1-201ENSMUST00000025279 DiexfQ8BTT6 772 aaKnown RBP18.38■□□□□ 0.53
Npc1-201ENSMUST00000025279 Os9Q8K2C7 672 aa18.33■□□□□ 0.53
Npc1-201ENSMUST00000025279 Zcchc6Q5BLK4 1491 aaKnown RBP18.33■□□□□ 0.52
Npc1-201ENSMUST00000025279 Mier1Q5UAK0 511 aa18.29■□□□□ 0.52
Npc1-201ENSMUST00000025279 Rtl5Q5DTT4 599 aa18.29■□□□□ 0.52
Npc1-201ENSMUST00000025279 ClspnQ80YR7 1315 aa18.13■□□□□ 0.49
Npc1-201ENSMUST00000025279 Anks4bQ8K3X6 423 aa18.1■□□□□ 0.49
Npc1-201ENSMUST00000025279 Csrnp3P59055 597 aa18.08■□□□□ 0.48
Npc1-201ENSMUST00000025279 Anp32aO35381 247 aa18.07■□□□□ 0.48
Npc1-201ENSMUST00000025279 Sall2Q9QX96 1004 aa18.04■□□□□ 0.48
Npc1-201ENSMUST00000025279 Gm38655A0A286YDK6 273 aa18.03■□□□□ 0.48
Npc1-201ENSMUST00000025279 Lmod2Q3UHZ5 550 aa18.02■□□□□ 0.48
Npc1-201ENSMUST00000025279 Plekhg3Q4VAC9 1341 aa18.01■□□□□ 0.47
Npc1-201ENSMUST00000025279 Abcc9P70170 1546 aa18■□□□□ 0.47
Npc1-201ENSMUST00000025279 Aplp2Q06335 707 aa17.98■□□□□ 0.47
Npc1-201ENSMUST00000025279 Zbtb7cQ8VCZ7 619 aa17.97■□□□□ 0.47
Npc1-201ENSMUST00000025279 DaxxO35613 739 aa17.93■□□□□ 0.46
Npc1-201ENSMUST00000025279 Mapk8ip2Q9ERE9 830 aa17.89■□□□□ 0.45
Npc1-201ENSMUST00000025279 Gm35339A0A140LHH9 1649 aa17.89■□□□□ 0.45
Npc1-201ENSMUST00000025279 Hnrnpul2Q00PI9 745 aaKnown RBP17.87■□□□□ 0.45
Npc1-201ENSMUST00000025279 Dcaf1Q80TR8 1506 aa17.83■□□□□ 0.45
Npc1-201ENSMUST00000025279 Zbtb4Q5F293 982 aa17.83■□□□□ 0.44
Npc1-201ENSMUST00000025279 Eid3Q3V124 375 aa17.82■□□□□ 0.44
Npc1-201ENSMUST00000025279 Npm1Q61937 292 aaKnown RBP17.82■□□□□ 0.44
Npc1-201ENSMUST00000025279 Chic1Q8CBW7 227 aa17.72■□□□□ 0.43
Npc1-201ENSMUST00000025279 Nlrp6Q91WS2 869 aa17.72■□□□□ 0.43
Npc1-201ENSMUST00000025279 1700123L14RikQ3V2K7 440 aa17.71■□□□□ 0.42
Npc1-201ENSMUST00000025279 Prdm10Q3UTQ7 1184 aa17.67■□□□□ 0.42
Npc1-201ENSMUST00000025279 Polr3glQ8R0C0 218 aa17.67■□□□□ 0.42
Npc1-201ENSMUST00000025279 Erich6D3Z6S9 713 aa17.66■□□□□ 0.42
Npc1-201ENSMUST00000025279 Gm13697A2AK42 830 aa17.65■□□□□ 0.42
Npc1-201ENSMUST00000025279 ArxO35085 564 aa17.64■□□□□ 0.41
Npc1-201ENSMUST00000025279 Clip1Q922J3 1391 aa17.61■□□□□ 0.41
Npc1-201ENSMUST00000025279 Ifnlr1Q8CGK5 535 aa17.6■□□□□ 0.41
Npc1-201ENSMUST00000025279 Calr4Q3TQS0 420 aa17.59■□□□□ 0.41
Npc1-201ENSMUST00000025279 Atp1b4Q99ME6 356 aa17.58■□□□□ 0.41
Npc1-201ENSMUST00000025279 Ppp4r2Q0VGB7 417 aa17.54■□□□□ 0.4
Npc1-201ENSMUST00000025279 Ccer2J3QPU5 274 aa17.51■□□□□ 0.39
Npc1-201ENSMUST00000025279 Cep164Q5DU05 1446 aa17.5■□□□□ 0.39
Npc1-201ENSMUST00000025279 Fkbp15Q6P9Q6 1216 aaKnown RBP17.45■□□□□ 0.38
Npc1-201ENSMUST00000025279 Hdac5Q9Z2V6 1113 aa17.45■□□□□ 0.38
Npc1-201ENSMUST00000025279 Wdr43Q6ZQL4 677 aaKnown RBP17.43■□□□□ 0.38
Npc1-201ENSMUST00000025279 Fam71e1A1L3C1 212 aa17.43■□□□□ 0.38
Npc1-201ENSMUST00000025279 Mrs2Q5NCE8 434 aa17.41■□□□□ 0.38
Npc1-201ENSMUST00000025279 Brd4Q9ESU6 1400 aaKnown RBP17.41■□□□□ 0.38
Npc1-201ENSMUST00000025279 Upf2A2AT37 1269 aaKnown RBP17.4■□□□□ 0.38
Npc1-201ENSMUST00000025279 Rad21Q61550 635 aaKnown RBP17.39■□□□□ 0.38
Npc1-201ENSMUST00000025279 Gm13695A2AK44 830 aa17.38■□□□□ 0.37
Npc1-201ENSMUST00000025279 Rangap1P46061 589 aaKnown RBP17.37■□□□□ 0.37
Npc1-201ENSMUST00000025279 Ccdc9Q8VC31 543 aaKnown RBP17.36■□□□□ 0.37
Npc1-201ENSMUST00000025279 Chic2Q9D9G3 165 aa17.34■□□□□ 0.37
Npc1-201ENSMUST00000025279 Aebp2Q9Z248 504 aaKnown RBP17.34■□□□□ 0.37
Npc1-201ENSMUST00000025279 Abcc8B2RUS7 1588 aa17.33■□□□□ 0.37
Npc1-201ENSMUST00000025279 Hsp90aa1P07901 733 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms