Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
PCDHA13Q9Y5I0 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC35.63■■■■□ 3.29
PCDHA13Q9Y5I0 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.52■■■■□ 3.28
PCDHA13Q9Y5I0 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC35.37■■■■□ 3.25
PCDHA13Q9Y5I0 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.24■■■■□ 3.23
PCDHA13Q9Y5I0 AL356512.1-201ENST00000607453 1739 ntBASIC35.2■■■■□ 3.23
PCDHA13Q9Y5I0 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.93■■■■□ 3.18
PCDHA13Q9Y5I0 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.91■■■■□ 3.18
PCDHA13Q9Y5I0 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.5■■■■□ 3.11
PCDHA13Q9Y5I0 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
PCDHA13Q9Y5I0 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
PCDHA13Q9Y5I0 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
PCDHA13Q9Y5I0 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC34.14■■■■□ 3.06
PCDHA13Q9Y5I0 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.13■■■■□ 3.05
PCDHA13Q9Y5I0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
PCDHA13Q9Y5I0 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC34.03■■■■□ 3.04
PCDHA13Q9Y5I0 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC34■■■■□ 3.03
PCDHA13Q9Y5I0 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.75■■■□□ 2.99
PCDHA13Q9Y5I0 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
PCDHA13Q9Y5I0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.65■■■□□ 2.98
PCDHA13Q9Y5I0 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.62■■■□□ 2.97
PCDHA13Q9Y5I0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
PCDHA13Q9Y5I0 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC33.47■■■□□ 2.95
PCDHA13Q9Y5I0 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC33.32■■■□□ 2.92
PCDHA13Q9Y5I0 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
PCDHA13Q9Y5I0 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC33.32■■■□□ 2.92
PCDHA13Q9Y5I0 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.28■■■□□ 2.92
PCDHA13Q9Y5I0 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.17■■■□□ 2.9
PCDHA13Q9Y5I0 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.11■■■□□ 2.89
PCDHA13Q9Y5I0 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.09■■■□□ 2.89
PCDHA13Q9Y5I0 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.82■■■□□ 2.84
PCDHA13Q9Y5I0 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
PCDHA13Q9Y5I0 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.66■■■□□ 2.82
PCDHA13Q9Y5I0 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.66■■■□□ 2.82
PCDHA13Q9Y5I0 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
PCDHA13Q9Y5I0 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
PCDHA13Q9Y5I0 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.57■■■□□ 2.8
PCDHA13Q9Y5I0 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.54■■■□□ 2.8
PCDHA13Q9Y5I0 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.51■■■□□ 2.79
PCDHA13Q9Y5I0 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.49■■■□□ 2.79
PCDHA13Q9Y5I0 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
PCDHA13Q9Y5I0 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
PCDHA13Q9Y5I0 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.29■■■□□ 2.76
PCDHA13Q9Y5I0 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PCDHA13Q9Y5I0 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
PCDHA13Q9Y5I0 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.14■■■□□ 2.74
PCDHA13Q9Y5I0 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
PCDHA13Q9Y5I0 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
PCDHA13Q9Y5I0 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
PCDHA13Q9Y5I0 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.01■■■□□ 2.71
PCDHA13Q9Y5I0 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
PCDHA13Q9Y5I0 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32■■■□□ 2.71
PCDHA13Q9Y5I0 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.99■■■□□ 2.71
PCDHA13Q9Y5I0 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
PCDHA13Q9Y5I0 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.99■■■□□ 2.71
PCDHA13Q9Y5I0 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
PCDHA13Q9Y5I0 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
PCDHA13Q9Y5I0 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
PCDHA13Q9Y5I0 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.84■■■□□ 2.69
PCDHA13Q9Y5I0 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PCDHA13Q9Y5I0 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PCDHA13Q9Y5I0 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PCDHA13Q9Y5I0 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.66■■■□□ 2.66
PCDHA13Q9Y5I0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
PCDHA13Q9Y5I0 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
PCDHA13Q9Y5I0 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.59■■■□□ 2.65
PCDHA13Q9Y5I0 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PCDHA13Q9Y5I0 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
PCDHA13Q9Y5I0 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
PCDHA13Q9Y5I0 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
PCDHA13Q9Y5I0 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PCDHA13Q9Y5I0 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PCDHA13Q9Y5I0 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
PCDHA13Q9Y5I0 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.3■■■□□ 2.6
PCDHA13Q9Y5I0 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
PCDHA13Q9Y5I0 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PCDHA13Q9Y5I0 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
PCDHA13Q9Y5I0 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PCDHA13Q9Y5I0 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.23■■■□□ 2.59
PCDHA13Q9Y5I0 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.22■■■□□ 2.59
PCDHA13Q9Y5I0 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
PCDHA13Q9Y5I0 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PCDHA13Q9Y5I0 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
PCDHA13Q9Y5I0 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PCDHA13Q9Y5I0 AC145285.7-201ENST00000614819 1539 ntBASIC31.11■■■□□ 2.57
PCDHA13Q9Y5I0 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
PCDHA13Q9Y5I0 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.09■■■□□ 2.57
PCDHA13Q9Y5I0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
PCDHA13Q9Y5I0 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
PCDHA13Q9Y5I0 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
PCDHA13Q9Y5I0 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
PCDHA13Q9Y5I0 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
PCDHA13Q9Y5I0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
PCDHA13Q9Y5I0 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
PCDHA13Q9Y5I0 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PCDHA13Q9Y5I0 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
PCDHA13Q9Y5I0 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
PCDHA13Q9Y5I0 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
PCDHA13Q9Y5I0 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
PCDHA13Q9Y5I0 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms