Protein–RNA interactions for Protein: Q9UGL9

CRCT1, Cysteine-rich C-terminal protein 1, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRCT1Q9UGL9 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC16.68■□□□□ 0.26
CRCT1Q9UGL9 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CRCT1Q9UGL9 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRCT1Q9UGL9 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CRCT1Q9UGL9 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CRCT1Q9UGL9 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CRCT1Q9UGL9 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CRCT1Q9UGL9 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC15.89■□□□□ 0.13
CRCT1Q9UGL9 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CRCT1Q9UGL9 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC15.8■□□□□ 0.12
CRCT1Q9UGL9 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CRCT1Q9UGL9 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CRCT1Q9UGL9 ZNRF2P1-201ENST00000441407 443 ntBASIC15.73■□□□□ 0.11
CRCT1Q9UGL9 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CRCT1Q9UGL9 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CRCT1Q9UGL9 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CRCT1Q9UGL9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CRCT1Q9UGL9 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CRCT1Q9UGL9 AC006077.2-201ENST00000623591 457 ntBASIC15.59■□□□□ 0.09
CRCT1Q9UGL9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC15.53■□□□□ 0.08
CRCT1Q9UGL9 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CRCT1Q9UGL9 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC15.41■□□□□ 0.06
CRCT1Q9UGL9 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CRCT1Q9UGL9 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CRCT1Q9UGL9 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC15.35■□□□□ 0.05
CRCT1Q9UGL9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRCT1Q9UGL9 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CRCT1Q9UGL9 AP002365.1-201ENST00000603448 772 ntBASIC15.29■□□□□ 0.04
CRCT1Q9UGL9 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CRCT1Q9UGL9 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CRCT1Q9UGL9 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC15.25■□□□□ 0.03
CRCT1Q9UGL9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CRCT1Q9UGL9 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CRCT1Q9UGL9 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC15.2■□□□□ 0.02
CRCT1Q9UGL9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CRCT1Q9UGL9 INO80B-203ENST00000409917 796 ntTSL 2 BASIC15.19■□□□□ 0.02
CRCT1Q9UGL9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
CRCT1Q9UGL9 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC15.1■□□□□ 0.01
CRCT1Q9UGL9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC15.08■□□□□ 0
CRCT1Q9UGL9 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CRCT1Q9UGL9 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CRCT1Q9UGL9 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
CRCT1Q9UGL9 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
CRCT1Q9UGL9 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC15.04■□□□□ -0
CRCT1Q9UGL9 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CRCT1Q9UGL9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CRCT1Q9UGL9 RPS2P35-201ENST00000443417 897 ntBASIC15□□□□□ -0.01
CRCT1Q9UGL9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC14.97□□□□□ -0.01
CRCT1Q9UGL9 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC14.93□□□□□ -0.02
CRCT1Q9UGL9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC14.92□□□□□ -0.02
CRCT1Q9UGL9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC14.91□□□□□ -0.02
CRCT1Q9UGL9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CRCT1Q9UGL9 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC14.9□□□□□ -0.02
CRCT1Q9UGL9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC14.89□□□□□ -0.03
CRCT1Q9UGL9 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CRCT1Q9UGL9 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CRCT1Q9UGL9 AC015813.7-201ENST00000623294 581 ntBASIC14.8□□□□□ -0.04
CRCT1Q9UGL9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC14.72□□□□□ -0.05
CRCT1Q9UGL9 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CRCT1Q9UGL9 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CRCT1Q9UGL9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CRCT1Q9UGL9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CRCT1Q9UGL9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CRCT1Q9UGL9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CRCT1Q9UGL9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CRCT1Q9UGL9 MIR7108-201ENST00000614319 87 ntBASIC14.61□□□□□ -0.07
CRCT1Q9UGL9 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CRCT1Q9UGL9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC14.58□□□□□ -0.08
CRCT1Q9UGL9 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CRCT1Q9UGL9 HLA-V-202ENST00000446817 847 ntBASIC14.57□□□□□ -0.08
CRCT1Q9UGL9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC14.57□□□□□ -0.08
CRCT1Q9UGL9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CRCT1Q9UGL9 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC14.56□□□□□ -0.08
CRCT1Q9UGL9 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CRCT1Q9UGL9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC14.56□□□□□ -0.08
CRCT1Q9UGL9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CRCT1Q9UGL9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.54□□□□□ -0.08
CRCT1Q9UGL9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC14.53□□□□□ -0.08
CRCT1Q9UGL9 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC14.53□□□□□ -0.08
CRCT1Q9UGL9 AL356512.1-201ENST00000607453 1739 ntBASIC14.52□□□□□ -0.09
CRCT1Q9UGL9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CRCT1Q9UGL9 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CRCT1Q9UGL9 AC097358.2-201ENST00000607541 1159 ntBASIC14.48□□□□□ -0.09
CRCT1Q9UGL9 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC14.47□□□□□ -0.09
CRCT1Q9UGL9 RARRES2P7-201ENST00000567349 469 ntBASIC14.47□□□□□ -0.09
CRCT1Q9UGL9 SUZ12P1-203ENST00000578195 985 ntBASIC14.47□□□□□ -0.09
CRCT1Q9UGL9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CRCT1Q9UGL9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CRCT1Q9UGL9 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CRCT1Q9UGL9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CRCT1Q9UGL9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC14.43□□□□□ -0.1
CRCT1Q9UGL9 ABHD17AP4-201ENST00000411545 909 ntBASIC14.42□□□□□ -0.1
CRCT1Q9UGL9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CRCT1Q9UGL9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CRCT1Q9UGL9 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CRCT1Q9UGL9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CRCT1Q9UGL9 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC14.36□□□□□ -0.11
CRCT1Q9UGL9 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CRCT1Q9UGL9 DYNLL1-208ENST00000550178 581 ntBASIC14.34□□□□□ -0.11
CRCT1Q9UGL9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms