Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
CALR3Q96L12 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.23■■■■□ 3.23
CALR3Q96L12 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC35.07■■■■□ 3.2
CALR3Q96L12 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.95■■■■□ 3.19
CALR3Q96L12 AL356512.1-201ENST00000607453 1739 ntBASIC34.84■■■■□ 3.17
CALR3Q96L12 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC34.71■■■■□ 3.15
CALR3Q96L12 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.58■■■■□ 3.13
CALR3Q96L12 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.5■■■■□ 3.11
CALR3Q96L12 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
CALR3Q96L12 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.14■■■■□ 3.06
CALR3Q96L12 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
CALR3Q96L12 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
CALR3Q96L12 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.79■■■■□ 3
CALR3Q96L12 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.6■■■□□ 2.97
CALR3Q96L12 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
CALR3Q96L12 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.45■■■□□ 2.94
CALR3Q96L12 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.44■■■□□ 2.94
CALR3Q96L12 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
CALR3Q96L12 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
CALR3Q96L12 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.2■■■□□ 2.9
CALR3Q96L12 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
CALR3Q96L12 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.06■■■□□ 2.88
CALR3Q96L12 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.06■■■□□ 2.88
CALR3Q96L12 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.99■■■□□ 2.87
CALR3Q96L12 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.95■■■□□ 2.87
CALR3Q96L12 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CALR3Q96L12 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.81■■■□□ 2.84
CALR3Q96L12 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CALR3Q96L12 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.76■■■□□ 2.83
CALR3Q96L12 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.73■■■□□ 2.83
CALR3Q96L12 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
CALR3Q96L12 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.3■■■□□ 2.76
CALR3Q96L12 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.3■■■□□ 2.76
CALR3Q96L12 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.28■■■□□ 2.76
CALR3Q96L12 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.27■■■□□ 2.76
CALR3Q96L12 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.75
CALR3Q96L12 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.2■■■□□ 2.75
CALR3Q96L12 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
CALR3Q96L12 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
CALR3Q96L12 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
CALR3Q96L12 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.08■■■□□ 2.73
CALR3Q96L12 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.02■■■□□ 2.72
CALR3Q96L12 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.92■■■□□ 2.7
CALR3Q96L12 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CALR3Q96L12 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
CALR3Q96L12 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CALR3Q96L12 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.78■■■□□ 2.68
CALR3Q96L12 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CALR3Q96L12 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
CALR3Q96L12 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.64■■■□□ 2.66
CALR3Q96L12 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CALR3Q96L12 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CALR3Q96L12 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
CALR3Q96L12 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.52■■■□□ 2.64
CALR3Q96L12 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.51■■■□□ 2.63
CALR3Q96L12 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CALR3Q96L12 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.49■■■□□ 2.63
CALR3Q96L12 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CALR3Q96L12 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CALR3Q96L12 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
CALR3Q96L12 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CALR3Q96L12 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.6
CALR3Q96L12 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
CALR3Q96L12 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
CALR3Q96L12 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CALR3Q96L12 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
CALR3Q96L12 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CALR3Q96L12 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
CALR3Q96L12 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CALR3Q96L12 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CALR3Q96L12 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
CALR3Q96L12 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CALR3Q96L12 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.97■■■□□ 2.55
CALR3Q96L12 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CALR3Q96L12 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CALR3Q96L12 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.86■■■□□ 2.53
CALR3Q96L12 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CALR3Q96L12 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CALR3Q96L12 AC145285.7-201ENST00000614819 1539 ntBASIC30.82■■■□□ 2.52
CALR3Q96L12 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CALR3Q96L12 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CALR3Q96L12 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CALR3Q96L12 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CALR3Q96L12 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CALR3Q96L12 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CALR3Q96L12 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
CALR3Q96L12 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CALR3Q96L12 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.61■■■□□ 2.49
CALR3Q96L12 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CALR3Q96L12 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
CALR3Q96L12 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CALR3Q96L12 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
CALR3Q96L12 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
CALR3Q96L12 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.57■■■□□ 2.48
CALR3Q96L12 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.56■■■□□ 2.48
CALR3Q96L12 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CALR3Q96L12 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CALR3Q96L12 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CALR3Q96L12 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
CALR3Q96L12 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.53■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms