Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC27.18■■□□□ 1.94
C3orf56Q8N813 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
C3orf56Q8N813 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
C3orf56Q8N813 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
C3orf56Q8N813 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
C3orf56Q8N813 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
C3orf56Q8N813 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
C3orf56Q8N813 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC26■■□□□ 1.75
C3orf56Q8N813 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
C3orf56Q8N813 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
C3orf56Q8N813 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC25.63■■□□□ 1.69
C3orf56Q8N813 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
C3orf56Q8N813 AL356512.1-201ENST00000607453 1739 ntBASIC25.61■■□□□ 1.69
C3orf56Q8N813 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC25.55■■□□□ 1.68
C3orf56Q8N813 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
C3orf56Q8N813 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
C3orf56Q8N813 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
C3orf56Q8N813 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
C3orf56Q8N813 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC25.22■■□□□ 1.63
C3orf56Q8N813 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
C3orf56Q8N813 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
C3orf56Q8N813 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
C3orf56Q8N813 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
C3orf56Q8N813 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
C3orf56Q8N813 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
C3orf56Q8N813 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC25■■□□□ 1.59
C3orf56Q8N813 INO80B-203ENST00000409917 796 ntTSL 2 BASIC24.93■■□□□ 1.58
C3orf56Q8N813 ZNRF2P1-201ENST00000441407 443 ntBASIC24.92■■□□□ 1.58
C3orf56Q8N813 AC006077.2-201ENST00000623591 457 ntBASIC24.89■■□□□ 1.58
C3orf56Q8N813 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC24.79■■□□□ 1.56
C3orf56Q8N813 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
C3orf56Q8N813 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC24.71■■□□□ 1.55
C3orf56Q8N813 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
C3orf56Q8N813 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
C3orf56Q8N813 AC015813.7-201ENST00000623294 581 ntBASIC24.5■■□□□ 1.51
C3orf56Q8N813 HES6-203ENST00000409160 1600 ntTSL 2 BASIC24.35■■□□□ 1.49
C3orf56Q8N813 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
C3orf56Q8N813 AP002365.1-201ENST00000603448 772 ntBASIC24.29■■□□□ 1.48
C3orf56Q8N813 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
C3orf56Q8N813 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
C3orf56Q8N813 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC24.18■■□□□ 1.46
C3orf56Q8N813 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
C3orf56Q8N813 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC24.17■■□□□ 1.46
C3orf56Q8N813 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
C3orf56Q8N813 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
C3orf56Q8N813 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC24.13■■□□□ 1.45
C3orf56Q8N813 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC24.02■■□□□ 1.44
C3orf56Q8N813 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC24.02■■□□□ 1.44
C3orf56Q8N813 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC23.99■■□□□ 1.43
C3orf56Q8N813 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.97■■□□□ 1.43
C3orf56Q8N813 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
C3orf56Q8N813 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC23.94■■□□□ 1.42
C3orf56Q8N813 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC23.92■■□□□ 1.42
C3orf56Q8N813 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
C3orf56Q8N813 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
C3orf56Q8N813 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
C3orf56Q8N813 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
C3orf56Q8N813 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC23.86■■□□□ 1.41
C3orf56Q8N813 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
C3orf56Q8N813 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC23.85■■□□□ 1.41
C3orf56Q8N813 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
C3orf56Q8N813 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
C3orf56Q8N813 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC23.71■■□□□ 1.39
C3orf56Q8N813 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.71■■□□□ 1.39
C3orf56Q8N813 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
C3orf56Q8N813 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC23.68■■□□□ 1.38
C3orf56Q8N813 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
C3orf56Q8N813 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC23.66■■□□□ 1.38
C3orf56Q8N813 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.64■■□□□ 1.37
C3orf56Q8N813 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
C3orf56Q8N813 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
C3orf56Q8N813 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
C3orf56Q8N813 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
C3orf56Q8N813 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
C3orf56Q8N813 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
C3orf56Q8N813 DYNLL1-208ENST00000550178 581 ntBASIC23.52■■□□□ 1.36
C3orf56Q8N813 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
C3orf56Q8N813 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
C3orf56Q8N813 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
C3orf56Q8N813 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
C3orf56Q8N813 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
C3orf56Q8N813 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
C3orf56Q8N813 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
C3orf56Q8N813 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
C3orf56Q8N813 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
C3orf56Q8N813 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
C3orf56Q8N813 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC23.39■■□□□ 1.33
C3orf56Q8N813 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC23.39■■□□□ 1.33
C3orf56Q8N813 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
C3orf56Q8N813 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.36■■□□□ 1.33
C3orf56Q8N813 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.36■■□□□ 1.33
C3orf56Q8N813 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC23.36■■□□□ 1.33
C3orf56Q8N813 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.33■■□□□ 1.33
C3orf56Q8N813 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
C3orf56Q8N813 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.31■■□□□ 1.32
C3orf56Q8N813 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
C3orf56Q8N813 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.3■■□□□ 1.32
C3orf56Q8N813 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.3■■□□□ 1.32
C3orf56Q8N813 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.29■■□□□ 1.32
C3orf56Q8N813 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms