Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC41.03■■■■■ 4.16
COL13A1Q5TAT6 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC40.81■■■■■ 4.12
COL13A1Q5TAT6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC40.05■■■■■ 4
COL13A1Q5TAT6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC39.99■■■■□ 3.99
COL13A1Q5TAT6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC39.8■■■■□ 3.96
COL13A1Q5TAT6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC39.65■■■■□ 3.94
COL13A1Q5TAT6 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC39.39■■■■□ 3.9
COL13A1Q5TAT6 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC39.13■■■■□ 3.85
COL13A1Q5TAT6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC39.12■■■■□ 3.85
COL13A1Q5TAT6 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
COL13A1Q5TAT6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
COL13A1Q5TAT6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
COL13A1Q5TAT6 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC38.33■■■■□ 3.73
COL13A1Q5TAT6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC38.32■■■■□ 3.72
COL13A1Q5TAT6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
COL13A1Q5TAT6 ZNRF2P1-201ENST00000441407 443 ntBASIC38.23■■■■□ 3.71
COL13A1Q5TAT6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
COL13A1Q5TAT6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC38.18■■■■□ 3.7
COL13A1Q5TAT6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC38.05■■■■□ 3.68
COL13A1Q5TAT6 AC006077.2-201ENST00000623591 457 ntBASIC37.99■■■■□ 3.67
COL13A1Q5TAT6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC37.98■■■■□ 3.67
COL13A1Q5TAT6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
COL13A1Q5TAT6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC37.91■■■■□ 3.66
COL13A1Q5TAT6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC37.69■■■■□ 3.62
COL13A1Q5TAT6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC37.65■■■■□ 3.62
COL13A1Q5TAT6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC37.64■■■■□ 3.62
COL13A1Q5TAT6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
COL13A1Q5TAT6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC37.5■■■■□ 3.59
COL13A1Q5TAT6 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC37.41■■■■□ 3.58
COL13A1Q5TAT6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC37.29■■■■□ 3.56
COL13A1Q5TAT6 AP002365.1-201ENST00000603448 772 ntBASIC37.22■■■■□ 3.55
COL13A1Q5TAT6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC37.14■■■■□ 3.54
COL13A1Q5TAT6 AL356512.1-201ENST00000607453 1739 ntBASIC37.1■■■■□ 3.53
COL13A1Q5TAT6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC37.1■■■■□ 3.53
COL13A1Q5TAT6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC37.08■■■■□ 3.53
COL13A1Q5TAT6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC37.08■■■■□ 3.53
COL13A1Q5TAT6 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC36.89■■■■□ 3.5
COL13A1Q5TAT6 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC36.87■■■■□ 3.49
COL13A1Q5TAT6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC36.86■■■■□ 3.49
COL13A1Q5TAT6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC36.82■■■■□ 3.48
COL13A1Q5TAT6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC36.81■■■■□ 3.48
COL13A1Q5TAT6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC36.76■■■■□ 3.48
COL13A1Q5TAT6 AC015813.7-201ENST00000623294 581 ntBASIC36.76■■■■□ 3.48
COL13A1Q5TAT6 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC36.75■■■■□ 3.47
COL13A1Q5TAT6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
COL13A1Q5TAT6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC36.68■■■■□ 3.46
COL13A1Q5TAT6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC36.67■■■■□ 3.46
COL13A1Q5TAT6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
COL13A1Q5TAT6 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC36.52■■■■□ 3.44
COL13A1Q5TAT6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC36.43■■■■□ 3.42
COL13A1Q5TAT6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC36.37■■■■□ 3.41
COL13A1Q5TAT6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC36.32■■■■□ 3.4
COL13A1Q5TAT6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC36.29■■■■□ 3.4
COL13A1Q5TAT6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC36.25■■■■□ 3.39
COL13A1Q5TAT6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC36.24■■■■□ 3.39
COL13A1Q5TAT6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC36.23■■■■□ 3.39
COL13A1Q5TAT6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC36.17■■■■□ 3.38
COL13A1Q5TAT6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC36.16■■■■□ 3.38
COL13A1Q5TAT6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC36.15■■■■□ 3.38
COL13A1Q5TAT6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC36.09■■■■□ 3.37
COL13A1Q5TAT6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC36.05■■■■□ 3.36
COL13A1Q5TAT6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
COL13A1Q5TAT6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC36.04■■■■□ 3.36
COL13A1Q5TAT6 RPS2P35-201ENST00000443417 897 ntBASIC36.03■■■■□ 3.36
COL13A1Q5TAT6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC36■■■■□ 3.35
COL13A1Q5TAT6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.95■■■■□ 3.35
COL13A1Q5TAT6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC35.95■■■■□ 3.35
COL13A1Q5TAT6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC35.85■■■■□ 3.33
COL13A1Q5TAT6 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC35.77■■■■□ 3.32
COL13A1Q5TAT6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC35.76■■■■□ 3.31
COL13A1Q5TAT6 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
COL13A1Q5TAT6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC35.61■■■■□ 3.29
COL13A1Q5TAT6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
COL13A1Q5TAT6 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC35.55■■■■□ 3.28
COL13A1Q5TAT6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
COL13A1Q5TAT6 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
COL13A1Q5TAT6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
COL13A1Q5TAT6 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
COL13A1Q5TAT6 DYNLL1-208ENST00000550178 581 ntBASIC35.49■■■■□ 3.27
COL13A1Q5TAT6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC35.46■■■■□ 3.27
COL13A1Q5TAT6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC35.43■■■■□ 3.26
COL13A1Q5TAT6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
COL13A1Q5TAT6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
COL13A1Q5TAT6 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
COL13A1Q5TAT6 RARRES2P7-201ENST00000567349 469 ntBASIC35.35■■■■□ 3.25
COL13A1Q5TAT6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC35.32■■■■□ 3.24
COL13A1Q5TAT6 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC35.32■■■■□ 3.24
COL13A1Q5TAT6 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC35.32■■■■□ 3.24
COL13A1Q5TAT6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC35.31■■■■□ 3.24
COL13A1Q5TAT6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC35.31■■■■□ 3.24
COL13A1Q5TAT6 AC097358.2-201ENST00000607541 1159 ntBASIC35.31■■■■□ 3.24
COL13A1Q5TAT6 SUZ12P1-203ENST00000578195 985 ntBASIC35.25■■■■□ 3.23
COL13A1Q5TAT6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC35.22■■■■□ 3.23
COL13A1Q5TAT6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
COL13A1Q5TAT6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC35.2■■■■□ 3.23
COL13A1Q5TAT6 AL031258.1-201ENST00000623562 325 ntBASIC35.18■■■■□ 3.22
COL13A1Q5TAT6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC35.11■■■■□ 3.21
COL13A1Q5TAT6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
COL13A1Q5TAT6 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
COL13A1Q5TAT6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC35.08■■■■□ 3.21
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms