Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
RTL8CO15255 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC23.01■■□□□ 1.27
RTL8CO15255 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
RTL8CO15255 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTL8CO15255 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RTL8CO15255 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
RTL8CO15255 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
RTL8CO15255 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTL8CO15255 AL356512.1-201ENST00000607453 1739 ntBASIC21.95■■□□□ 1.1
RTL8CO15255 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC21.95■■□□□ 1.1
RTL8CO15255 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTL8CO15255 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RTL8CO15255 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC21.8■■□□□ 1.08
RTL8CO15255 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC21.79■■□□□ 1.08
RTL8CO15255 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTL8CO15255 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTL8CO15255 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
RTL8CO15255 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTL8CO15255 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTL8CO15255 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RTL8CO15255 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RTL8CO15255 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC21.31■■□□□ 1
RTL8CO15255 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RTL8CO15255 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTL8CO15255 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
RTL8CO15255 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL8CO15255 INO80B-203ENST00000409917 796 ntTSL 2 BASIC21.17■□□□□ 0.98
RTL8CO15255 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RTL8CO15255 HES6-203ENST00000409160 1600 ntTSL 2 BASIC21.06■□□□□ 0.96
RTL8CO15255 ZNRF2P1-201ENST00000441407 443 ntBASIC21.01■□□□□ 0.95
RTL8CO15255 AC006077.2-201ENST00000623591 457 ntBASIC20.99■□□□□ 0.95
RTL8CO15255 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTL8CO15255 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.96■□□□□ 0.95
RTL8CO15255 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC20.92■□□□□ 0.94
RTL8CO15255 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL8CO15255 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.84■□□□□ 0.93
RTL8CO15255 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC20.83■□□□□ 0.93
RTL8CO15255 AC015813.7-201ENST00000623294 581 ntBASIC20.82■□□□□ 0.92
RTL8CO15255 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTL8CO15255 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTL8CO15255 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC20.56■□□□□ 0.88
RTL8CO15255 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTL8CO15255 AP002365.1-201ENST00000603448 772 ntBASIC20.48■□□□□ 0.87
RTL8CO15255 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RTL8CO15255 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTL8CO15255 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RTL8CO15255 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RTL8CO15255 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC20.35■□□□□ 0.85
RTL8CO15255 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTL8CO15255 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTL8CO15255 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.33■□□□□ 0.85
RTL8CO15255 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
RTL8CO15255 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RTL8CO15255 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL8CO15255 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC20.31■□□□□ 0.84
RTL8CO15255 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL8CO15255 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.27■□□□□ 0.84
RTL8CO15255 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.25■□□□□ 0.83
RTL8CO15255 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL8CO15255 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RTL8CO15255 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.21■□□□□ 0.83
RTL8CO15255 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.18■□□□□ 0.82
RTL8CO15255 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTL8CO15255 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTL8CO15255 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
RTL8CO15255 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RTL8CO15255 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL8CO15255 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RTL8CO15255 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.07■□□□□ 0.8
RTL8CO15255 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL8CO15255 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.02■□□□□ 0.8
RTL8CO15255 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RTL8CO15255 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTL8CO15255 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL8CO15255 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL8CO15255 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL8CO15255 DYNLL1-208ENST00000550178 581 ntBASIC19.97■□□□□ 0.79
RTL8CO15255 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL8CO15255 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RTL8CO15255 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL8CO15255 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL8CO15255 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.9■□□□□ 0.78
RTL8CO15255 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.9■□□□□ 0.78
RTL8CO15255 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTL8CO15255 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTL8CO15255 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RTL8CO15255 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTL8CO15255 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTL8CO15255 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.86■□□□□ 0.77
RTL8CO15255 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTL8CO15255 AL031258.1-201ENST00000623562 325 ntBASIC19.81■□□□□ 0.76
RTL8CO15255 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.8■□□□□ 0.76
RTL8CO15255 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RTL8CO15255 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.74■□□□□ 0.75
RTL8CO15255 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.74■□□□□ 0.75
RTL8CO15255 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL8CO15255 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL8CO15255 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL8CO15255 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.72■□□□□ 0.75
RTL8CO15255 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms