Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
LRRC53A6NM62 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.14■■■■□ 3.38
LRRC53A6NM62 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC35.75■■■■□ 3.31
LRRC53A6NM62 AL356512.1-201ENST00000607453 1739 ntBASIC35.66■■■■□ 3.3
LRRC53A6NM62 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.57■■■■□ 3.28
LRRC53A6NM62 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.44■■■■□ 3.26
LRRC53A6NM62 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC35.31■■■■□ 3.24
LRRC53A6NM62 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.26■■■■□ 3.23
LRRC53A6NM62 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
LRRC53A6NM62 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.85■■■■□ 3.17
LRRC53A6NM62 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
LRRC53A6NM62 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.62■■■■□ 3.13
LRRC53A6NM62 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
LRRC53A6NM62 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC34.24■■■■□ 3.07
LRRC53A6NM62 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC34.2■■■■□ 3.07
LRRC53A6NM62 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
LRRC53A6NM62 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
LRRC53A6NM62 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.93■■■■□ 3.02
LRRC53A6NM62 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.91■■■■□ 3.02
LRRC53A6NM62 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.91■■■■□ 3.02
LRRC53A6NM62 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.88■■■■□ 3.01
LRRC53A6NM62 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.84■■■■□ 3.01
LRRC53A6NM62 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
LRRC53A6NM62 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
LRRC53A6NM62 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.5■■■□□ 2.95
LRRC53A6NM62 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
LRRC53A6NM62 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.33■■■□□ 2.93
LRRC53A6NM62 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC33.26■■■□□ 2.91
LRRC53A6NM62 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
LRRC53A6NM62 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC33.2■■■□□ 2.91
LRRC53A6NM62 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.18■■■□□ 2.9
LRRC53A6NM62 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.18■■■□□ 2.9
LRRC53A6NM62 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33.16■■■□□ 2.9
LRRC53A6NM62 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
LRRC53A6NM62 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.12■■■□□ 2.89
LRRC53A6NM62 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.12■■■□□ 2.89
LRRC53A6NM62 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.96■■■□□ 2.87
LRRC53A6NM62 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
LRRC53A6NM62 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.86■■■□□ 2.85
LRRC53A6NM62 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
LRRC53A6NM62 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
LRRC53A6NM62 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.73■■■□□ 2.83
LRRC53A6NM62 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.7■■■□□ 2.82
LRRC53A6NM62 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.66■■■□□ 2.82
LRRC53A6NM62 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.61■■■□□ 2.81
LRRC53A6NM62 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
LRRC53A6NM62 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.39■■■□□ 2.78
LRRC53A6NM62 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.38■■■□□ 2.77
LRRC53A6NM62 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.38■■■□□ 2.77
LRRC53A6NM62 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.36■■■□□ 2.77
LRRC53A6NM62 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
LRRC53A6NM62 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
LRRC53A6NM62 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.25■■■□□ 2.75
LRRC53A6NM62 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
LRRC53A6NM62 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32.16■■■□□ 2.74
LRRC53A6NM62 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.11■■■□□ 2.73
LRRC53A6NM62 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
LRRC53A6NM62 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
LRRC53A6NM62 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
LRRC53A6NM62 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
LRRC53A6NM62 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
LRRC53A6NM62 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
LRRC53A6NM62 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
LRRC53A6NM62 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.82■■■□□ 2.69
LRRC53A6NM62 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
LRRC53A6NM62 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
LRRC53A6NM62 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
LRRC53A6NM62 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
LRRC53A6NM62 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
LRRC53A6NM62 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
LRRC53A6NM62 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
LRRC53A6NM62 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
LRRC53A6NM62 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
LRRC53A6NM62 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
LRRC53A6NM62 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
LRRC53A6NM62 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
LRRC53A6NM62 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
LRRC53A6NM62 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.48■■■□□ 2.63
LRRC53A6NM62 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
LRRC53A6NM62 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.46■■■□□ 2.63
LRRC53A6NM62 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
LRRC53A6NM62 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.45■■■□□ 2.63
LRRC53A6NM62 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.62
LRRC53A6NM62 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
LRRC53A6NM62 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
LRRC53A6NM62 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
LRRC53A6NM62 AC145285.7-201ENST00000614819 1539 ntBASIC31.4■■■□□ 2.62
LRRC53A6NM62 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
LRRC53A6NM62 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
LRRC53A6NM62 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.34■■■□□ 2.61
LRRC53A6NM62 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
LRRC53A6NM62 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
LRRC53A6NM62 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
LRRC53A6NM62 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.29■■■□□ 2.6
LRRC53A6NM62 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
LRRC53A6NM62 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
LRRC53A6NM62 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
LRRC53A6NM62 AC015813.7-201ENST00000623294 581 ntBASIC31.21■■■□□ 2.59
LRRC53A6NM62 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
LRRC53A6NM62 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms