Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.9■■□□□ 1.42
CLCA3PQ9Y6N3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CLCA3PQ9Y6N3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.89■■□□□ 1.41
CLCA3PQ9Y6N3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.89■■□□□ 1.41
CLCA3PQ9Y6N3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CLCA3PQ9Y6N3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCA3PQ9Y6N3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCA3PQ9Y6N3 CR559946.2-201ENST00000623684 991 ntBASIC23.88■■□□□ 1.41
CLCA3PQ9Y6N3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLCA3PQ9Y6N3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLCA3PQ9Y6N3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.87■■□□□ 1.41
CLCA3PQ9Y6N3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CLCA3PQ9Y6N3 AC100797.4-201ENST00000631653 1827 ntBASIC23.87■■□□□ 1.41
CLCA3PQ9Y6N3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLCA3PQ9Y6N3 AC016575.1-201ENST00000607026 382 ntBASIC23.86■■□□□ 1.41
CLCA3PQ9Y6N3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.86■■□□□ 1.41
CLCA3PQ9Y6N3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.86■■□□□ 1.41
CLCA3PQ9Y6N3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CLCA3PQ9Y6N3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.85■■□□□ 1.41
CLCA3PQ9Y6N3 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.85■■□□□ 1.41
CLCA3PQ9Y6N3 HLA-V-202ENST00000446817 847 ntBASIC23.85■■□□□ 1.41
CLCA3PQ9Y6N3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.85■■□□□ 1.41
CLCA3PQ9Y6N3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.85■■□□□ 1.41
CLCA3PQ9Y6N3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.85■■□□□ 1.41
CLCA3PQ9Y6N3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
CLCA3PQ9Y6N3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CLCA3PQ9Y6N3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CLCA3PQ9Y6N3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLCA3PQ9Y6N3 AC110285.7-201ENST00000624417 1536 ntBASIC23.83■■□□□ 1.41
CLCA3PQ9Y6N3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.83■■□□□ 1.4
CLCA3PQ9Y6N3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.82■■□□□ 1.4
CLCA3PQ9Y6N3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
CLCA3PQ9Y6N3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCA3PQ9Y6N3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLCA3PQ9Y6N3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLCA3PQ9Y6N3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.81■■□□□ 1.4
CLCA3PQ9Y6N3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLCA3PQ9Y6N3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.81■■□□□ 1.4
CLCA3PQ9Y6N3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLCA3PQ9Y6N3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCA3PQ9Y6N3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLCA3PQ9Y6N3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CLCA3PQ9Y6N3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCA3PQ9Y6N3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCA3PQ9Y6N3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.79■■□□□ 1.4
CLCA3PQ9Y6N3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLCA3PQ9Y6N3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.78■■□□□ 1.4
CLCA3PQ9Y6N3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLCA3PQ9Y6N3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.78■■□□□ 1.4
CLCA3PQ9Y6N3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLCA3PQ9Y6N3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLCA3PQ9Y6N3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLCA3PQ9Y6N3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.77■■□□□ 1.4
CLCA3PQ9Y6N3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
CLCA3PQ9Y6N3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLCA3PQ9Y6N3 MIR639-201ENST00000384974 98 ntBASIC23.76■■□□□ 1.39
CLCA3PQ9Y6N3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.76■■□□□ 1.39
CLCA3PQ9Y6N3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CLCA3PQ9Y6N3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.75■■□□□ 1.39
CLCA3PQ9Y6N3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLCA3PQ9Y6N3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLCA3PQ9Y6N3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.74■■□□□ 1.39
CLCA3PQ9Y6N3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLCA3PQ9Y6N3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLCA3PQ9Y6N3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCA3PQ9Y6N3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.73■■□□□ 1.39
CLCA3PQ9Y6N3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCA3PQ9Y6N3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCA3PQ9Y6N3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CLCA3PQ9Y6N3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CLCA3PQ9Y6N3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CLCA3PQ9Y6N3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLCA3PQ9Y6N3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
CLCA3PQ9Y6N3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
CLCA3PQ9Y6N3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.71■■□□□ 1.39
CLCA3PQ9Y6N3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CLCA3PQ9Y6N3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLCA3PQ9Y6N3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLCA3PQ9Y6N3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLCA3PQ9Y6N3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLCA3PQ9Y6N3 AC008813.1-201ENST00000536597 885 ntBASIC23.7■■□□□ 1.38
CLCA3PQ9Y6N3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.7■■□□□ 1.38
CLCA3PQ9Y6N3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CLCA3PQ9Y6N3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLCA3PQ9Y6N3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CLCA3PQ9Y6N3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CLCA3PQ9Y6N3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLCA3PQ9Y6N3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLCA3PQ9Y6N3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CLCA3PQ9Y6N3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CLCA3PQ9Y6N3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CLCA3PQ9Y6N3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CLCA3PQ9Y6N3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CLCA3PQ9Y6N3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CLCA3PQ9Y6N3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.67■■□□□ 1.38
CLCA3PQ9Y6N3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CLCA3PQ9Y6N3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.66■■□□□ 1.38
CLCA3PQ9Y6N3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CLCA3PQ9Y6N3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.66■■□□□ 1.38
CLCA3PQ9Y6N3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms