Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.33■□□□□ 0.68
LINC00479Q96M42 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.33■□□□□ 0.68
LINC00479Q96M42 AC091060.1-201ENST00000623524 1766 ntBASIC19.32■□□□□ 0.68
LINC00479Q96M42 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.32■□□□□ 0.68
LINC00479Q96M42 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00479Q96M42 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00479Q96M42 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00479Q96M42 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LINC00479Q96M42 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00479Q96M42 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00479Q96M42 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00479Q96M42 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00479Q96M42 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00479Q96M42 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LINC00479Q96M42 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00479Q96M42 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00479Q96M42 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
LINC00479Q96M42 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.29■□□□□ 0.68
LINC00479Q96M42 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00479Q96M42 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.29■□□□□ 0.68
LINC00479Q96M42 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00479Q96M42 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00479Q96M42 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00479Q96M42 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC00479Q96M42 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC00479Q96M42 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC00479Q96M42 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LINC00479Q96M42 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LINC00479Q96M42 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LINC00479Q96M42 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
LINC00479Q96M42 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LINC00479Q96M42 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LINC00479Q96M42 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LINC00479Q96M42 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC00479Q96M42 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC00479Q96M42 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.26■□□□□ 0.67
LINC00479Q96M42 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00479Q96M42 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00479Q96M42 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00479Q96M42 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC00479Q96M42 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LINC00479Q96M42 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC00479Q96M42 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC00479Q96M42 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC00479Q96M42 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.24■□□□□ 0.67
LINC00479Q96M42 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LINC00479Q96M42 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00479Q96M42 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.23■□□□□ 0.67
LINC00479Q96M42 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00479Q96M42 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00479Q96M42 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00479Q96M42 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00479Q96M42 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00479Q96M42 AC020928.2-201ENST00000588717 2197 ntBASIC19.22■□□□□ 0.67
LINC00479Q96M42 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00479Q96M42 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00479Q96M42 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00479Q96M42 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
LINC00479Q96M42 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00479Q96M42 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00479Q96M42 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LINC00479Q96M42 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
LINC00479Q96M42 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.21■□□□□ 0.67
LINC00479Q96M42 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00479Q96M42 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.2■□□□□ 0.66
LINC00479Q96M42 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00479Q96M42 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.2■□□□□ 0.66
LINC00479Q96M42 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
LINC00479Q96M42 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00479Q96M42 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
LINC00479Q96M42 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00479Q96M42 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00479Q96M42 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC00479Q96M42 AP002414.2-202ENST00000590929 1450 ntBASIC19.19■□□□□ 0.66
LINC00479Q96M42 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC00479Q96M42 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.19■□□□□ 0.66
LINC00479Q96M42 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.19■□□□□ 0.66
LINC00479Q96M42 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LINC00479Q96M42 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC00479Q96M42 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.18■□□□□ 0.66
LINC00479Q96M42 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.18■□□□□ 0.66
LINC00479Q96M42 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00479Q96M42 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00479Q96M42 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00479Q96M42 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00479Q96M42 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LINC00479Q96M42 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LINC00479Q96M42 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.16■□□□□ 0.66
LINC00479Q96M42 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00479Q96M42 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00479Q96M42 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
LINC00479Q96M42 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00479Q96M42 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LINC00479Q96M42 AC145676.1-201ENST00000514988 2004 ntBASIC19.15■□□□□ 0.66
LINC00479Q96M42 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00479Q96M42 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00479Q96M42 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00479Q96M42 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.15■□□□□ 0.66
LINC00479Q96M42 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00479Q96M42 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms