Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SHKBP1Q8TBC3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SHKBP1Q8TBC3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.78■■□□□ 1.88
SHKBP1Q8TBC3 ABHD17AP5-201ENST00000580133 923 ntBASIC26.78■■□□□ 1.88
SHKBP1Q8TBC3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SHKBP1Q8TBC3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SHKBP1Q8TBC3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SHKBP1Q8TBC3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.88
SHKBP1Q8TBC3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.76■■□□□ 1.88
SHKBP1Q8TBC3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.76■■□□□ 1.88
SHKBP1Q8TBC3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.76■■□□□ 1.87
SHKBP1Q8TBC3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
SHKBP1Q8TBC3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.76■■□□□ 1.87
SHKBP1Q8TBC3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SHKBP1Q8TBC3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.76■■□□□ 1.87
SHKBP1Q8TBC3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SHKBP1Q8TBC3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
SHKBP1Q8TBC3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.75■■□□□ 1.87
SHKBP1Q8TBC3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SHKBP1Q8TBC3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.75■■□□□ 1.87
SHKBP1Q8TBC3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
SHKBP1Q8TBC3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.74■■□□□ 1.87
SHKBP1Q8TBC3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
SHKBP1Q8TBC3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SHKBP1Q8TBC3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SHKBP1Q8TBC3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SHKBP1Q8TBC3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SHKBP1Q8TBC3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SHKBP1Q8TBC3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
SHKBP1Q8TBC3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
SHKBP1Q8TBC3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
SHKBP1Q8TBC3 AC148477.6-201ENST00000623746 465 ntBASIC26.72■■□□□ 1.87
SHKBP1Q8TBC3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SHKBP1Q8TBC3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SHKBP1Q8TBC3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SHKBP1Q8TBC3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
SHKBP1Q8TBC3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
SHKBP1Q8TBC3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SHKBP1Q8TBC3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.71■■□□□ 1.87
SHKBP1Q8TBC3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.71■■□□□ 1.87
SHKBP1Q8TBC3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.71■■□□□ 1.87
SHKBP1Q8TBC3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.71■■□□□ 1.87
SHKBP1Q8TBC3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SHKBP1Q8TBC3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
SHKBP1Q8TBC3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.7■■□□□ 1.87
SHKBP1Q8TBC3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
SHKBP1Q8TBC3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SHKBP1Q8TBC3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SHKBP1Q8TBC3 ABCB10P3-201ENST00000561950 2166 ntBASIC26.7■■□□□ 1.86
SHKBP1Q8TBC3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
SHKBP1Q8TBC3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SHKBP1Q8TBC3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.69■■□□□ 1.86
SHKBP1Q8TBC3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
SHKBP1Q8TBC3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
SHKBP1Q8TBC3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SHKBP1Q8TBC3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.68■■□□□ 1.86
SHKBP1Q8TBC3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SHKBP1Q8TBC3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SHKBP1Q8TBC3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SHKBP1Q8TBC3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SHKBP1Q8TBC3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SHKBP1Q8TBC3 ST7-AS1-201ENST00000456775 1889 ntBASIC26.67■■□□□ 1.86
SHKBP1Q8TBC3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.67■■□□□ 1.86
SHKBP1Q8TBC3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SHKBP1Q8TBC3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.66■■□□□ 1.86
SHKBP1Q8TBC3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SHKBP1Q8TBC3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SHKBP1Q8TBC3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SHKBP1Q8TBC3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SHKBP1Q8TBC3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.64■■□□□ 1.86
SHKBP1Q8TBC3 MIR219A2-201ENST00000608502 1504 ntBASIC26.64■■□□□ 1.85
SHKBP1Q8TBC3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SHKBP1Q8TBC3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
SHKBP1Q8TBC3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.63■■□□□ 1.85
SHKBP1Q8TBC3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SHKBP1Q8TBC3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SHKBP1Q8TBC3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SHKBP1Q8TBC3 AC060814.1-201ENST00000554326 538 ntBASIC26.62■■□□□ 1.85
SHKBP1Q8TBC3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SHKBP1Q8TBC3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SHKBP1Q8TBC3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.61■■□□□ 1.85
SHKBP1Q8TBC3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
SHKBP1Q8TBC3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.61■■□□□ 1.85
SHKBP1Q8TBC3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SHKBP1Q8TBC3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SHKBP1Q8TBC3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SHKBP1Q8TBC3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
SHKBP1Q8TBC3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SHKBP1Q8TBC3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SHKBP1Q8TBC3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.59■■□□□ 1.85
SHKBP1Q8TBC3 AC139426.1-201ENST00000568218 2529 ntBASIC26.59■■□□□ 1.85
SHKBP1Q8TBC3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.59■■□□□ 1.85
SHKBP1Q8TBC3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
SHKBP1Q8TBC3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SHKBP1Q8TBC3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SHKBP1Q8TBC3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SHKBP1Q8TBC3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
SHKBP1Q8TBC3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.57■■□□□ 1.84
SHKBP1Q8TBC3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SHKBP1Q8TBC3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms