Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RAB42Q8N4Z0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.73■■□□□ 1.55
RAB42Q8N4Z0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.72■■□□□ 1.55
RAB42Q8N4Z0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RAB42Q8N4Z0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
RAB42Q8N4Z0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RAB42Q8N4Z0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.72■■□□□ 1.55
RAB42Q8N4Z0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RAB42Q8N4Z0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
RAB42Q8N4Z0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.71■■□□□ 1.55
RAB42Q8N4Z0 AC110285.7-201ENST00000624417 1536 ntBASIC24.71■■□□□ 1.55
RAB42Q8N4Z0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RAB42Q8N4Z0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RAB42Q8N4Z0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.7■■□□□ 1.54
RAB42Q8N4Z0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RAB42Q8N4Z0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
RAB42Q8N4Z0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.69■■□□□ 1.54
RAB42Q8N4Z0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.69■■□□□ 1.54
RAB42Q8N4Z0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RAB42Q8N4Z0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RAB42Q8N4Z0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RAB42Q8N4Z0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RAB42Q8N4Z0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RAB42Q8N4Z0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.68■■□□□ 1.54
RAB42Q8N4Z0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RAB42Q8N4Z0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
RAB42Q8N4Z0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.67■■□□□ 1.54
RAB42Q8N4Z0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RAB42Q8N4Z0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
RAB42Q8N4Z0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
RAB42Q8N4Z0 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.66■■□□□ 1.54
RAB42Q8N4Z0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.66■■□□□ 1.54
RAB42Q8N4Z0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.66■■□□□ 1.54
RAB42Q8N4Z0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RAB42Q8N4Z0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RAB42Q8N4Z0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RAB42Q8N4Z0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RAB42Q8N4Z0 MIR3648-2-201ENST00000581792 180 ntBASIC24.65■■□□□ 1.54
RAB42Q8N4Z0 MIR3648-1-201ENST00000615959 180 ntBASIC24.65■■□□□ 1.54
RAB42Q8N4Z0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
RAB42Q8N4Z0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RAB42Q8N4Z0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
RAB42Q8N4Z0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RAB42Q8N4Z0 AP002414.2-202ENST00000590929 1450 ntBASIC24.64■■□□□ 1.53
RAB42Q8N4Z0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RAB42Q8N4Z0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RAB42Q8N4Z0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
RAB42Q8N4Z0 CR559946.2-201ENST00000623684 991 ntBASIC24.63■■□□□ 1.53
RAB42Q8N4Z0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.62■■□□□ 1.53
RAB42Q8N4Z0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
RAB42Q8N4Z0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.62■■□□□ 1.53
RAB42Q8N4Z0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
RAB42Q8N4Z0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.62■■□□□ 1.53
RAB42Q8N4Z0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAB42Q8N4Z0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAB42Q8N4Z0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAB42Q8N4Z0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAB42Q8N4Z0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.6■■□□□ 1.53
RAB42Q8N4Z0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
RAB42Q8N4Z0 AC008813.1-201ENST00000536597 885 ntBASIC24.6■■□□□ 1.53
RAB42Q8N4Z0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAB42Q8N4Z0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RAB42Q8N4Z0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RAB42Q8N4Z0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
RAB42Q8N4Z0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RAB42Q8N4Z0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.59■■□□□ 1.53
RAB42Q8N4Z0 DRD5P2-201ENST00000421395 2012 ntBASIC24.58■■□□□ 1.53
RAB42Q8N4Z0 AC016575.1-201ENST00000607026 382 ntBASIC24.58■■□□□ 1.53
RAB42Q8N4Z0 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
RAB42Q8N4Z0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RAB42Q8N4Z0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.57■■□□□ 1.52
RAB42Q8N4Z0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RAB42Q8N4Z0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
RAB42Q8N4Z0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RAB42Q8N4Z0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RAB42Q8N4Z0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.56■■□□□ 1.52
RAB42Q8N4Z0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RAB42Q8N4Z0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RAB42Q8N4Z0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.55■■□□□ 1.52
RAB42Q8N4Z0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RAB42Q8N4Z0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RAB42Q8N4Z0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
RAB42Q8N4Z0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RAB42Q8N4Z0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RAB42Q8N4Z0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RAB42Q8N4Z0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.54■■□□□ 1.52
RAB42Q8N4Z0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.54■■□□□ 1.52
RAB42Q8N4Z0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RAB42Q8N4Z0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RAB42Q8N4Z0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RAB42Q8N4Z0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RAB42Q8N4Z0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RAB42Q8N4Z0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RAB42Q8N4Z0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RAB42Q8N4Z0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RAB42Q8N4Z0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RAB42Q8N4Z0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
RAB42Q8N4Z0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RAB42Q8N4Z0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RAB42Q8N4Z0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms