Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CLDN4O14493 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLDN4O14493 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CLDN4O14493 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
CLDN4O14493 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLDN4O14493 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLDN4O14493 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.96■■□□□ 1.43
CLDN4O14493 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.96■■□□□ 1.43
CLDN4O14493 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.96■■□□□ 1.43
CLDN4O14493 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CLDN4O14493 CR559946.2-201ENST00000623684 991 ntBASIC23.95■■□□□ 1.42
CLDN4O14493 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CLDN4O14493 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CLDN4O14493 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLDN4O14493 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLDN4O14493 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.94■■□□□ 1.42
CLDN4O14493 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.94■■□□□ 1.42
CLDN4O14493 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
CLDN4O14493 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLDN4O14493 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLDN4O14493 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.94■■□□□ 1.42
CLDN4O14493 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
CLDN4O14493 AC016575.1-201ENST00000607026 382 ntBASIC23.93■■□□□ 1.42
CLDN4O14493 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.93■■□□□ 1.42
CLDN4O14493 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLDN4O14493 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CLDN4O14493 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CLDN4O14493 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CLDN4O14493 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.91■■□□□ 1.42
CLDN4O14493 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CLDN4O14493 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CLDN4O14493 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CLDN4O14493 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CLDN4O14493 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
CLDN4O14493 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CLDN4O14493 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CLDN4O14493 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CLDN4O14493 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
CLDN4O14493 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CLDN4O14493 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CLDN4O14493 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
CLDN4O14493 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLDN4O14493 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLDN4O14493 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.87■■□□□ 1.41
CLDN4O14493 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLDN4O14493 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLDN4O14493 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.87■■□□□ 1.41
CLDN4O14493 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
CLDN4O14493 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLDN4O14493 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLDN4O14493 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLDN4O14493 HLA-V-202ENST00000446817 847 ntBASIC23.86■■□□□ 1.41
CLDN4O14493 AC008813.1-201ENST00000536597 885 ntBASIC23.86■■□□□ 1.41
CLDN4O14493 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.86■■□□□ 1.41
CLDN4O14493 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.86■■□□□ 1.41
CLDN4O14493 AP002414.2-202ENST00000590929 1450 ntBASIC23.86■■□□□ 1.41
CLDN4O14493 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLDN4O14493 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLDN4O14493 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CLDN4O14493 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CLDN4O14493 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
CLDN4O14493 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLDN4O14493 MIR639-201ENST00000384974 98 ntBASIC23.84■■□□□ 1.41
CLDN4O14493 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.84■■□□□ 1.41
CLDN4O14493 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CLDN4O14493 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLDN4O14493 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLDN4O14493 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.83■■□□□ 1.41
CLDN4O14493 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CLDN4O14493 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.82■■□□□ 1.4
CLDN4O14493 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CLDN4O14493 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLDN4O14493 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CLDN4O14493 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.82■■□□□ 1.4
CLDN4O14493 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CLDN4O14493 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLDN4O14493 DRD5P2-201ENST00000421395 2012 ntBASIC23.81■■□□□ 1.4
CLDN4O14493 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLDN4O14493 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLDN4O14493 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CLDN4O14493 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.8■■□□□ 1.4
CLDN4O14493 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.8■■□□□ 1.4
CLDN4O14493 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLDN4O14493 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLDN4O14493 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLDN4O14493 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLDN4O14493 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CLDN4O14493 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLDN4O14493 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLDN4O14493 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.78■■□□□ 1.4
CLDN4O14493 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CLDN4O14493 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.78■■□□□ 1.4
CLDN4O14493 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLDN4O14493 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLDN4O14493 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLDN4O14493 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLDN4O14493 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CLDN4O14493 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.76■■□□□ 1.39
CLDN4O14493 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLDN4O14493 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms