Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.36■□□□□ 0.53
IGHV4-28A0A0C4DH34 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
IGHV4-28A0A0C4DH34 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.35■□□□□ 0.53
IGHV4-28A0A0C4DH34 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.35■□□□□ 0.53
IGHV4-28A0A0C4DH34 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IGHV4-28A0A0C4DH34 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
IGHV4-28A0A0C4DH34 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.35■□□□□ 0.53
IGHV4-28A0A0C4DH34 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IGHV4-28A0A0C4DH34 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IGHV4-28A0A0C4DH34 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
IGHV4-28A0A0C4DH34 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IGHV4-28A0A0C4DH34 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
IGHV4-28A0A0C4DH34 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
IGHV4-28A0A0C4DH34 AC100797.4-201ENST00000631653 1827 ntBASIC18.33■□□□□ 0.53
IGHV4-28A0A0C4DH34 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.33■□□□□ 0.52
IGHV4-28A0A0C4DH34 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IGHV4-28A0A0C4DH34 AC008813.1-201ENST00000536597 885 ntBASIC18.33■□□□□ 0.52
IGHV4-28A0A0C4DH34 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.33■□□□□ 0.52
IGHV4-28A0A0C4DH34 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.33■□□□□ 0.52
IGHV4-28A0A0C4DH34 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IGHV4-28A0A0C4DH34 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IGHV4-28A0A0C4DH34 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
IGHV4-28A0A0C4DH34 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.32■□□□□ 0.52
IGHV4-28A0A0C4DH34 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.32■□□□□ 0.52
IGHV4-28A0A0C4DH34 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
IGHV4-28A0A0C4DH34 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.32■□□□□ 0.52
IGHV4-28A0A0C4DH34 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGHV4-28A0A0C4DH34 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
IGHV4-28A0A0C4DH34 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.31■□□□□ 0.52
IGHV4-28A0A0C4DH34 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGHV4-28A0A0C4DH34 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
IGHV4-28A0A0C4DH34 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
IGHV4-28A0A0C4DH34 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IGHV4-28A0A0C4DH34 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IGHV4-28A0A0C4DH34 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IGHV4-28A0A0C4DH34 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IGHV4-28A0A0C4DH34 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.3■□□□□ 0.52
IGHV4-28A0A0C4DH34 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
IGHV4-28A0A0C4DH34 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IGHV4-28A0A0C4DH34 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IGHV4-28A0A0C4DH34 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
IGHV4-28A0A0C4DH34 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
IGHV4-28A0A0C4DH34 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
IGHV4-28A0A0C4DH34 ABCB10P3-201ENST00000561950 2166 ntBASIC18.29■□□□□ 0.52
IGHV4-28A0A0C4DH34 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IGHV4-28A0A0C4DH34 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
IGHV4-28A0A0C4DH34 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IGHV4-28A0A0C4DH34 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
IGHV4-28A0A0C4DH34 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IGHV4-28A0A0C4DH34 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
IGHV4-28A0A0C4DH34 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IGHV4-28A0A0C4DH34 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
IGHV4-28A0A0C4DH34 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IGHV4-28A0A0C4DH34 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.27■□□□□ 0.52
IGHV4-28A0A0C4DH34 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
IGHV4-28A0A0C4DH34 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
IGHV4-28A0A0C4DH34 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IGHV4-28A0A0C4DH34 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.26■□□□□ 0.51
IGHV4-28A0A0C4DH34 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
IGHV4-28A0A0C4DH34 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.26■□□□□ 0.51
IGHV4-28A0A0C4DH34 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
IGHV4-28A0A0C4DH34 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IGHV4-28A0A0C4DH34 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
IGHV4-28A0A0C4DH34 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
IGHV4-28A0A0C4DH34 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.26■□□□□ 0.51
IGHV4-28A0A0C4DH34 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.26■□□□□ 0.51
IGHV4-28A0A0C4DH34 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
IGHV4-28A0A0C4DH34 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
IGHV4-28A0A0C4DH34 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
IGHV4-28A0A0C4DH34 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGHV4-28A0A0C4DH34 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGHV4-28A0A0C4DH34 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.24■□□□□ 0.51
IGHV4-28A0A0C4DH34 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.24■□□□□ 0.51
IGHV4-28A0A0C4DH34 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
IGHV4-28A0A0C4DH34 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
IGHV4-28A0A0C4DH34 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGHV4-28A0A0C4DH34 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.23■□□□□ 0.51
IGHV4-28A0A0C4DH34 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IGHV4-28A0A0C4DH34 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.23■□□□□ 0.51
IGHV4-28A0A0C4DH34 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.23■□□□□ 0.51
IGHV4-28A0A0C4DH34 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGHV4-28A0A0C4DH34 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGHV4-28A0A0C4DH34 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGHV4-28A0A0C4DH34 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IGHV4-28A0A0C4DH34 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IGHV4-28A0A0C4DH34 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.22■□□□□ 0.51
IGHV4-28A0A0C4DH34 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
IGHV4-28A0A0C4DH34 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IGHV4-28A0A0C4DH34 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
IGHV4-28A0A0C4DH34 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.21■□□□□ 0.51
IGHV4-28A0A0C4DH34 AC148477.6-201ENST00000623746 465 ntBASIC18.21■□□□□ 0.51
IGHV4-28A0A0C4DH34 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.21■□□□□ 0.5
IGHV4-28A0A0C4DH34 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.21■□□□□ 0.5
IGHV4-28A0A0C4DH34 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
IGHV4-28A0A0C4DH34 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IGHV4-28A0A0C4DH34 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
IGHV4-28A0A0C4DH34 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IGHV4-28A0A0C4DH34 HSD17B1P1-201ENST00000590052 955 ntBASIC18.2■□□□□ 0.5
IGHV4-28A0A0C4DH34 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.2■□□□□ 0.5
IGHV4-28A0A0C4DH34 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms