Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 HMGXB4-206ENST00000466438 575 ntTSL 317.54■□□□□ 0.48e-7■□□□□ 8.8
NKRFO15226 ZNF276-205ENST00000563541 588 ntTSL 316.32■□□□□ 0.28e-7■□□□□ 8.8
NKRFO15226 HMGXB4-204ENST00000455359 1325 ntTSL 1 (best)16.29■□□□□ 0.28e-7■□□□□ 8.8
NKRFO15226 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.198e-7■□□□□ 8.8
NKRFO15226 SMAD3-213ENST00000560175 542 ntTSL 415.3■□□□□ 0.045e-6■□□□□ 8.8
NKRFO15226 AIFM3-217ENST00000495869 501 ntTSL 414.51□□□□□ -0.098e-7■□□□□ 8.8
NKRFO15226 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.138e-7■□□□□ 8.8
NKRFO15226 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.158e-7■□□□□ 8.8
NKRFO15226 SMAD3-204ENST00000540846 1567 ntTSL 1 (best) BASIC13.83□□□□□ -0.195e-6■□□□□ 8.8
NKRFO15226 GPR137-210ENST00000538244 350 ntTSL 313.81□□□□□ -0.28e-7■□□□□ 8.8
NKRFO15226 BAHD1-201ENST00000416165 4526 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.398e-7■□□□□ 8.8
NKRFO15226 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.468e-7■□□□□ 8.8
NKRFO15226 YPEL5-203ENST00000379520 2560 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.548e-7■□□□□ 8.8
NKRFO15226 PLXNA3-201ENST00000369682 10885 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.576e-6■□□□□ 8.8
NKRFO15226 BCAP31-205ENST00000430088 570 ntTSL 29.38□□□□□ -0.918e-7■□□□□ 8.8
NKRFO15226 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.988e-7■□□□□ 8.8
NKRFO15226 SMAD3-212ENST00000559937 579 ntTSL 48.9□□□□□ -0.985e-6■□□□□ 8.8
NKRFO15226 HMGXB4-202ENST00000418170 4216 ntTSL 1 (best)8.8□□□□□ -18e-7■□□□□ 8.8
NKRFO15226 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.268e-7■□□□□ 8.8
NKRFO15226 YPEL5-208ENST00000490211 653 ntTSL 56.9□□□□□ -1.38e-7■□□□□ 8.8
NKRFO15226 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.348e-7■□□□□ 8.8
NKRFO15226 SMAD3-209ENST00000558894 797 ntTSL 56.47□□□□□ -1.375e-6■□□□□ 8.8
NKRFO15226 PTPN9-204ENST00000564970 726 ntTSL 56.07□□□□□ -1.448e-7■□□□□ 8.8
NKRFO15226 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.468e-7■□□□□ 8.8
NKRFO15226 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.062e-12■□□□□ 8.8
NKRFO15226 DHCR24-203ENST00000535035 4153 ntTSL 1 (best) BASIC11.71□□□□□ -0.532e-12■□□□□ 8.8
NKRFO15226 SHROOM1-204ENST00000440118 1080 ntTSL 223.04■■□□□ 1.286e-8■□□□□ 8.7
NKRFO15226 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.016e-8■□□□□ 8.7
NKRFO15226 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.851e-8■□□□□ 8.7
NKRFO15226 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.378e-13■□□□□ 8.7
NKRFO15226 PLXND1-209ENST00000505505 559 ntTSL 219.49■□□□□ 0.715e-6■□□□□ 8.7
NKRFO15226 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.275e-6■□□□□ 8.7
NKRFO15226 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.75e-8■□□□□ 8.7
NKRFO15226 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.86■■■□□ 2.695e-8■□□□□ 8.7
NKRFO15226 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.525e-8■□□□□ 8.7
NKRFO15226 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.09■□□□□ 0.815e-8■□□□□ 8.7
NKRFO15226 NADK2-208ENST00000511088 579 ntTSL 49.73□□□□□ -0.855e-8■□□□□ 8.7
NKRFO15226 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC9.35□□□□□ -0.915e-8■□□□□ 8.7
NKRFO15226 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.12□□□□□ -1.595e-8■□□□□ 8.7
NKRFO15226 NME4-204ENST00000433358 966 ntTSL 327.1■■□□□ 1.933e-10■□□□□ 8.7
NKRFO15226 NME4-209ENST00000460297 1652 ntTSL 527.05■■□□□ 1.923e-10■□□□□ 8.7
NKRFO15226 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.623e-10■□□□□ 8.7
NKRFO15226 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.2■■□□□ 1.623e-10■□□□□ 8.7
NKRFO15226 MBD3-205ENST00000589064 1475 ntTSL 224■■□□□ 1.433e-10■□□□□ 8.7
NKRFO15226 MBD3-209ENST00000592012 2379 ntTSL 521.97■■□□□ 1.113e-10■□□□□ 8.7
NKRFO15226 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.47■■□□□ 1.033e-10■□□□□ 8.7
NKRFO15226 MBD3-210ENST00000592361 907 ntTSL 519.94■□□□□ 0.783e-10■□□□□ 8.7
NKRFO15226 RER1-208ENST00000493207 686 ntTSL 219.22■□□□□ 0.673e-10■□□□□ 8.7
NKRFO15226 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.073e-10■□□□□ 8.7
NKRFO15226 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.961e-6■□□□□ 8.7
NKRFO15226 HSBP1L1-203ENST00000589516 800 ntTSL 324.43■■□□□ 1.51e-6■□□□□ 8.7
NKRFO15226 HSBP1L1-205ENST00000592352 564 ntTSL 222.67■■□□□ 1.221e-6■□□□□ 8.7
NKRFO15226 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.253e-6■□□□□ 8.7
NKRFO15226 RAB11FIP3-203ENST00000434585 3550 ntAPPRIS ALT2 TSL 513.59□□□□□ -0.233e-6■□□□□ 8.7
NKRFO15226 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC13.32□□□□□ -0.283e-6■□□□□ 8.7
NKRFO15226 ZNF7-210ENST00000530082 581 ntTSL 323.86■■□□□ 1.412e-7■□□□□ 8.7
NKRFO15226 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.83■■□□□ 1.415e-14■□□□□ 8.7
NKRFO15226 ZNF7-214ENST00000532382 855 ntTSL 320.72■□□□□ 0.912e-7■□□□□ 8.7
NKRFO15226 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.27■□□□□ 0.842e-7■□□□□ 8.7
NKRFO15226 ZNF7-212ENST00000530776 546 ntTSL 420.27■□□□□ 0.842e-7■□□□□ 8.7
NKRFO15226 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.25■□□□□ 0.835e-14■□□□□ 8.7
NKRFO15226 ZNF7-216ENST00000532777 915 ntTSL 1 (best)20.03■□□□□ 0.82e-7■□□□□ 8.7
NKRFO15226 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.742e-7■□□□□ 8.7
NKRFO15226 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.02■□□□□ 0.645e-14■□□□□ 8.7
NKRFO15226 PFKL-211ENST00000498841 3122 ntTSL 1 (best)18.65■□□□□ 0.582e-7■□□□□ 8.7
NKRFO15226 PFKL-207ENST00000474114 6007 ntTSL 1 (best)18.3■□□□□ 0.522e-7■□□□□ 8.7
NKRFO15226 ZNF7-208ENST00000529767 546 ntTSL 417.77■□□□□ 0.442e-7■□□□□ 8.7
NKRFO15226 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.422e-7■□□□□ 8.7
NKRFO15226 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.412e-7■□□□□ 8.7
NKRFO15226 SEC23A-214ENST00000557437 575 ntTSL 417.41■□□□□ 0.385e-14■□□□□ 8.7
NKRFO15226 ZNF7-213ENST00000532051 540 ntTSL 417.4■□□□□ 0.382e-7■□□□□ 8.7
NKRFO15226 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.32■□□□□ 0.362e-7■□□□□ 8.7
NKRFO15226 SYNCRIP-203ENST00000444272 610 ntTSL 317.07■□□□□ 0.322e-7■□□□□ 8.7
NKRFO15226 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.74■□□□□ 0.275e-14■□□□□ 8.7
NKRFO15226 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.56■□□□□ 0.242e-7■□□□□ 8.7
NKRFO15226 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.242e-7■□□□□ 8.7
NKRFO15226 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.225e-14■□□□□ 8.7
NKRFO15226 SEC23A-212ENST00000556092 571 ntTSL 416.45■□□□□ 0.225e-14■□□□□ 8.7
NKRFO15226 ZNF7-217ENST00000533314 516 ntTSL 414.59□□□□□ -0.072e-7■□□□□ 8.7
NKRFO15226 CNOT3-210ENST00000618939 4516 ntTSL 514.44□□□□□ -0.15e-14■□□□□ 8.7
NKRFO15226 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.115e-14■□□□□ 8.7
NKRFO15226 ZNF7-204ENST00000527218 545 ntTSL 414.23□□□□□ -0.132e-7■□□□□ 8.7
NKRFO15226 ZNF7-209ENST00000529819 513 ntTSL 4 BASIC14.18□□□□□ -0.142e-7■□□□□ 8.7
NKRFO15226 ZNF7-211ENST00000530682 581 ntTSL 413.63□□□□□ -0.232e-7■□□□□ 8.7
NKRFO15226 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.392e-7■□□□□ 8.7
NKRFO15226 GNB1-202ENST00000434686 684 ntTSL 312.22□□□□□ -0.452e-7■□□□□ 8.7
NKRFO15226 ZNF7-215ENST00000532393 569 ntTSL 410.07□□□□□ -0.82e-7■□□□□ 8.7
NKRFO15226 SEC23A-210ENST00000555425 547 ntTSL 55.54□□□□□ -1.525e-14■□□□□ 8.7
NKRFO15226 SEC23A-208ENST00000555017 588 ntTSL 43.53□□□□□ -1.845e-14■□□□□ 8.7
NKRFO15226 CBX3-204ENST00000456948 1068 ntTSL 526.76■■□□□ 1.872e-11■□□□□ 8.6
NKRFO15226 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.23■□□□□ 0.352e-11■□□□□ 8.6
NKRFO15226 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.242e-11■□□□□ 8.6
NKRFO15226 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.182e-11■□□□□ 8.6
NKRFO15226 HMGN2-202ENST00000460563 1045 ntTSL 512.64□□□□□ -0.392e-7■□□□□ 8.6
NKRFO15226 HMGN2-204ENST00000464888 565 ntTSL 212.2□□□□□ -0.462e-7■□□□□ 8.6
NKRFO15226 HMGN2-203ENST00000463817 853 ntTSL 29.7□□□□□ -0.862e-7■□□□□ 8.6
NKRFO15226 HMGN2-208ENST00000479815 1030 ntTSL 59.7□□□□□ -0.862e-7■□□□□ 8.6
NKRFO15226 HMGN2-206ENST00000467700 932 ntTSL 28.58□□□□□ -1.042e-7■□□□□ 8.6
NKRFO15226 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.132e-7■□□□□ 8.6
NKRFO15226 HMGN2-207ENST00000468388 320 ntTSL 38□□□□□ -1.132e-7■□□□□ 8.6
Retrieved 100 of 9,198 protein–RNA pairs in 62.5 ms