RNA–Protein interactions for RNA: ENST00000557437.1

SEC23A-214, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-214ENST00000557437 NISCHQ9Y2I1 1504 aa37.15■■■■□ 3.54
SEC23A-214ENST00000557437 CCDC180Q9P1Z9 1646 aa33.17■■■□□ 2.9
SEC23A-214ENST00000557437 ABCC9O60706 1549 aa32.74■■■□□ 2.83
SEC23A-214ENST00000557437 RB1CC1Q8TDY2 1594 aa31.36■■■□□ 2.61
SEC23A-214ENST00000557437 NACADO15069 1562 aa31.27■■■□□ 2.6
SEC23A-214ENST00000557437 DCAF8L2P0C7V8 631 aa31.04■■■□□ 2.56
SEC23A-214ENST00000557437 MYO15BQ96JP2 1530 aa31.03■■■□□ 2.56
SEC23A-214ENST00000557437 ZCCHC6Q5VYS8 1495 aaKnown RBP30.88■■■□□ 2.53
SEC23A-214ENST00000557437 DCAF1Q9Y4B6 1507 aa30.76■■■□□ 2.51
SEC23A-214ENST00000557437 UNC13AQ9UPW8 1703 aa30.65■■■□□ 2.5
SEC23A-214ENST00000557437 PABPN1Q86U42 306 aaKnown RBP eCLIP30.53■■■□□ 2.48
SEC23A-214ENST00000557437 BICRAQ9NZM4 1560 aa30.48■■■□□ 2.47
SEC23A-214ENST00000557437 DNAJC5BQ9UF47 199 aa30.43■■■□□ 2.46
SEC23A-214ENST00000557437 SCRIBQ14160 1630 aa30.18■■■□□ 2.42
SEC23A-214ENST00000557437 SHROOM4Q9ULL8 1493 aa30.13■■■□□ 2.41
SEC23A-214ENST00000557437 EIF4G1Q04637 1599 aaKnown RBP29.68■■■□□ 2.34
SEC23A-214ENST00000557437 CC2D2AQ9P2K1 1620 aa29.62■■■□□ 2.33
SEC23A-214ENST00000557437 CECR2Q9BXF3 1484 aa29.48■■■□□ 2.31
SEC23A-214ENST00000557437 NCAPD3P42695 1498 aa28.89■■■□□ 2.22
SEC23A-214ENST00000557437 SMARCA4P51532 1647 aa28.88■■■□□ 2.21
SEC23A-214ENST00000557437 ATAD2BQ9ULI0 1458 aa28.83■■■□□ 2.21
SEC23A-214ENST00000557437 BAZ1AQ9NRL2 1556 aaPredicted RBP28.79■■■□□ 2.2
SEC23A-214ENST00000557437 SMARCA2P51531 1590 aa28.75■■■□□ 2.19
SEC23A-214ENST00000557437 HMGXB3Q12766 1538 aa28.69■■■□□ 2.18
SEC23A-214ENST00000557437 PEG3Q9GZU2 1588 aa28.66■■■□□ 2.18
SEC23A-214ENST00000557437 MROH2BQ7Z745 1585 aa28.61■■■□□ 2.17
SEC23A-214ENST00000557437 BAZ1BQ9UIG0 1483 aaKnown RBP28.53■■■□□ 2.16
SEC23A-214ENST00000557437 WIZO95785 1651 aa28.26■■■□□ 2.11
SEC23A-214ENST00000557437 NESP48681 1621 aa28.25■■■□□ 2.11
SEC23A-214ENST00000557437 ERCC6Q03468 1493 aa28.21■■■□□ 2.11
SEC23A-214ENST00000557437 RSF1Q96T23 1441 aaPredicted RBP28.17■■■□□ 2.1
SEC23A-214ENST00000557437 LAMC3Q9Y6N6 1575 aa28.15■■■□□ 2.1
SEC23A-214ENST00000557437 CUX2O14529 1486 aa28.11■■■□□ 2.09
SEC23A-214ENST00000557437 CADPSQ9ULU8 1353 aa27.99■■■□□ 2.07
SEC23A-214ENST00000557437 TOP2AP11388 1531 aaKnown RBP27.96■■■□□ 2.07
SEC23A-214ENST00000557437 PDS5BQ9NTI5 1447 aa27.95■■■□□ 2.07
SEC23A-214ENST00000557437 THOC2Q8NI27 1593 aaKnown RBP27.92■■■□□ 2.06
SEC23A-214ENST00000557437 KIF21AQ7Z4S6 1674 aa27.9■■■□□ 2.06
SEC23A-214ENST00000557437 CFTRP13569 1480 aa27.78■■■□□ 2.04
SEC23A-214ENST00000557437 MRC2Q9UBG0 1479 aa27.69■■■□□ 2.02
SEC23A-214ENST00000557437 DNAJC5Q9H3Z4 198 aa27.67■■■□□ 2.02
SEC23A-214ENST00000557437 FANCD2Q9BXW9 1451 aa27.65■■■□□ 2.02
SEC23A-214ENST00000557437 CEP164Q9UPV0 1460 aa27.64■■■□□ 2.02
SEC23A-214ENST00000557437 CCDC88BA6NC98 1476 aa27.64■■■□□ 2.01
SEC23A-214ENST00000557437 WDR62O43379 1518 aa27.63■■■□□ 2.01
SEC23A-214ENST00000557437 PRDM2Q13029 1718 aa27.49■■□□□ 1.99
SEC23A-214ENST00000557437 URB2Q14146 1524 aaKnown RBP27.42■■□□□ 1.98
SEC23A-214ENST00000557437 TOPBP1Q92547 1522 aa27.19■■□□□ 1.94
SEC23A-214ENST00000557437 ABCC8Q09428 1581 aa27.17■■□□□ 1.94
SEC23A-214ENST00000557437 DNMBPQ6XZF7 1577 aa27.12■■□□□ 1.93
SEC23A-214ENST00000557437 IFT140Q96RY7 1462 aa27.1■■□□□ 1.93
SEC23A-214ENST00000557437 SUPT5HO00267 1087 aaKnown RBP27.09■■□□□ 1.93
SEC23A-214ENST00000557437 ZNF608Q9ULD9 1512 aaPredicted RBP27■■□□□ 1.91
SEC23A-214ENST00000557437 POLA1P09884 1462 aaPredicted RBP26.94■■□□□ 1.9
SEC23A-214ENST00000557437 TARBP1Q13395 1621 aaKnown RBP26.94■■□□□ 1.9
SEC23A-214ENST00000557437 EIF4G3O43432 1585 aaKnown RBP26.88■■□□□ 1.89
SEC23A-214ENST00000557437 CUX1P39880 1505 aa26.85■■□□□ 1.89
SEC23A-214ENST00000557437 OSCARQ8IYS5 282 aa26.85■■□□□ 1.89
SEC23A-214ENST00000557437 FGD5Q6ZNL6 1462 aa26.81■■□□□ 1.88
SEC23A-214ENST00000557437 RAD54L2Q9Y4B4 1467 aa26.81■■□□□ 1.88
SEC23A-214ENST00000557437 SOGA1O94964 1423 aa26.8■■□□□ 1.88
SEC23A-214ENST00000557437 AQRO60306 1485 aaKnown RBP eCLIP26.8■■□□□ 1.885e-7■■■■■ 27.6
SEC23A-214ENST00000557437 WDR97A6NE52 1622 aa26.71■■□□□ 1.87
SEC23A-214ENST00000557437 TDRD9Q8NDG6 1382 aaKnown RBP26.69■■□□□ 1.86
SEC23A-214ENST00000557437 CHD1O14646 1710 aa26.57■■□□□ 1.84
SEC23A-214ENST00000557437 ABCA10Q8WWZ4 1543 aa26.55■■□□□ 1.84
SEC23A-214ENST00000557437 WRNQ14191 1432 aaPredicted RBP eCLIP26.54■■□□□ 1.84
SEC23A-214ENST00000557437 GRIN2BQ13224 1484 aa26.54■■□□□ 1.84
SEC23A-214ENST00000557437 SNAPC4Q5SXM2 1469 aa26.54■■□□□ 1.84
SEC23A-214ENST00000557437 TOP2BQ02880 1626 aa26.54■■□□□ 1.84
SEC23A-214ENST00000557437 BIVM-ERCC5R4GMW8 1640 aa26.54■■□□□ 1.84
SEC23A-214ENST00000557437 MAGI1Q96QZ7 1491 aaPredicted RBP26.51■■□□□ 1.83
SEC23A-214ENST00000557437 TRIM41Q8WV44 630 aa26.5■■□□□ 1.83
SEC23A-214ENST00000557437 SYNJ1O43426 1573 aa26.5■■□□□ 1.83
SEC23A-214ENST00000557437 GAPVD1Q14C86 1478 aa26.49■■□□□ 1.83
SEC23A-214ENST00000557437 ABCA5Q8WWZ7 1642 aa26.48■■□□□ 1.83
SEC23A-214ENST00000557437 FBLN2P98095 1184 aa26.47■■□□□ 1.83
SEC23A-214ENST00000557437 RIMBP3CA6NJZ7 1639 aa26.47■■□□□ 1.83
SEC23A-214ENST00000557437 RIMBP3BA6NNM3 1639 aa26.47■■□□□ 1.83
SEC23A-214ENST00000557437 RIMBP3Q9UFD9 1639 aa26.47■■□□□ 1.83
SEC23A-214ENST00000557437 ARHGEF11O15085 1522 aa26.44■■□□□ 1.82
SEC23A-214ENST00000557437 PBRM1Q86U86 1689 aa26.43■■□□□ 1.82
SEC23A-214ENST00000557437 SYNJ2O15056 1496 aa26.42■■□□□ 1.82
SEC23A-214ENST00000557437 CHMP7Q8WUX9 453 aaPredicted RBP26.38■■□□□ 1.81
SEC23A-214ENST00000557437 CLASP1Q7Z460 1538 aa26.34■■□□□ 1.81
SEC23A-214ENST00000557437 ADAMTS12P58397 1594 aa26.23■■□□□ 1.79
SEC23A-214ENST00000557437 ERICH3Q5RHP9 1530 aa26.23■■□□□ 1.79
SEC23A-214ENST00000557437 ARAP1Q96P48 1450 aa26.22■■□□□ 1.79
SEC23A-214ENST00000557437 GRIN2AQ12879 1464 aa26.2■■□□□ 1.78
SEC23A-214ENST00000557437 FHAD1B1AJZ9 1412 aa26.18■■□□□ 1.78
SEC23A-214ENST00000557437 CYB5RLQ6IPT4 315 aa26.18■■□□□ 1.78
SEC23A-214ENST00000557437 NUP160Q12769 1436 aa26.13■■□□□ 1.77
SEC23A-214ENST00000557437 CEP170Q5SW79 1584 aa26.08■■□□□ 1.77
SEC23A-214ENST00000557437 KIF27Q86VH2 1401 aa26■■□□□ 1.75
SEC23A-214ENST00000557437 IGF1RP08069 1367 aa25.98■■□□□ 1.75
SEC23A-214ENST00000557437 SHROOM2Q13796 1616 aa25.96■■□□□ 1.75
SEC23A-214ENST00000557437 ERCC6L2Q5T890 1561 aa25.93■■□□□ 1.74
SEC23A-214ENST00000557437 CUL7Q14999 1698 aa25.89■■□□□ 1.73
SEC23A-214ENST00000557437 RUSC2Q8N2Y8 1516 aa25.86■■□□□ 1.73
SEC23A-214ENST00000557437 JPH4Q96JJ6 628 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms