RNA–Protein interactions for RNA: ENST00000467700.5

HMGN2-206, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 2

Gene HMGN2, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-206ENST00000467700 AEBP2Q6ZN18 517 aaPredicted RBP36.24■■■■□ 3.39
HMGN2-206ENST00000467700 CHIC1Q5VXU3 224 aa34.55■■■■□ 3.12
HMGN2-206ENST00000467700 SENP3Q9H4L4 574 aaPredicted RBP30.78■■■□□ 2.52
HMGN2-206ENST00000467700 PHF23Q9BUL5 403 aaPredicted RBP30.47■■■□□ 2.47
HMGN2-206ENST00000467700 FOXD1Q16676 465 aa28.73■■■□□ 2.19
HMGN2-206ENST00000467700 PLPPR3Q6T4P5 718 aa27.68■■■□□ 2.02
HMGN2-206ENST00000467700 PPP6R1Q9UPN7 881 aa27.08■■□□□ 1.93
HMGN2-206ENST00000467700 ADRA2BP18089 450 aa27.01■■□□□ 1.91
HMGN2-206ENST00000467700 PIAS4Q8N2W9 510 aaPredicted RBP26.9■■□□□ 1.9
HMGN2-206ENST00000467700 MSH5O43196 834 aa26.71■■□□□ 1.87
HMGN2-206ENST00000467700 POTEDQ86YR6 584 aa25.79■■□□□ 1.72
HMGN2-206ENST00000467700 MAPK8IP2Q13387 824 aaPredicted RBP24.76■■□□□ 1.55
HMGN2-206ENST00000467700 SCAF1Q9H7N4 1312 aaKnown RBP24.57■■□□□ 1.52
HMGN2-206ENST00000467700 DMRT2Q9Y5R5 561 aa24.46■■□□□ 1.51
HMGN2-206ENST00000467700 PPP4R3CPQ6ZMV5 832 aa24.34■■□□□ 1.49
HMGN2-206ENST00000467700 CNKSR2Q8WXI2 1034 aa23.78■■□□□ 1.4
HMGN2-206ENST00000467700 HOXD11P31277 338 aaPredicted RBP23.62■■□□□ 1.37
HMGN2-206ENST00000467700 DCAF8L1A6NGE4 600 aa23.54■■□□□ 1.36
HMGN2-206ENST00000467700 RNF216Q9NWF9 866 aaPredicted RBP23.5■■□□□ 1.35
HMGN2-206ENST00000467700 NCBP3Q53F19 620 aaKnown RBP23.41■■□□□ 1.34
HMGN2-206ENST00000467700 NPM3O75607 178 aaKnown RBP23.14■■□□□ 1.29
HMGN2-206ENST00000467700 KCNA4P22459 653 aa22.93■■□□□ 1.26
HMGN2-206ENST00000467700 CACNB1Q02641 598 aaPredicted RBP22.86■■□□□ 1.25
HMGN2-206ENST00000467700 RNF39Q9H2S5 420 aa22.85■■□□□ 1.25
HMGN2-206ENST00000467700 DNAJC5BQ9UF47 199 aa22.66■■□□□ 1.22
HMGN2-206ENST00000467700 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.56■■□□□ 1.23e-13■■■□□ 16.2
HMGN2-206ENST00000467700 C1QBPQ07021 282 aaKnown RBP22.49■■□□□ 1.19
HMGN2-206ENST00000467700 U3KPZ7 1027 aaPredicted RBP22.12■■□□□ 1.13
HMGN2-206ENST00000467700 SLC4A2P04920 1241 aa22.06■■□□□ 1.12
HMGN2-206ENST00000467700 SPINK5Q9NQ38 1064 aaPredicted RBP21.78■■□□□ 1.08
HMGN2-206ENST00000467700 CAPN15O75808 1086 aa21.7■■□□□ 1.06
HMGN2-206ENST00000467700 SLC4A1APQ9BWU0 796 aaKnown RBP21.65■■□□□ 1.06
HMGN2-206ENST00000467700 DSG3P32926 999 aa21.49■■□□□ 1.03
HMGN2-206ENST00000467700 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.46■■□□□ 1.03
HMGN2-206ENST00000467700 HNRNPUL2Q1KMD3 747 aaKnown RBP21.46■■□□□ 1.03
HMGN2-206ENST00000467700 TRHP20396 242 aaPredicted RBP21.43■■□□□ 1.02
HMGN2-206ENST00000467700 APLP2Q06481 763 aa21.4■■□□□ 1.02
HMGN2-206ENST00000467700 SAMD1Q6SPF0 538 aaPredicted RBP21.38■■□□□ 1.01
HMGN2-206ENST00000467700 MYCNP04198 464 aaPredicted RBP21.35■■□□□ 1.01
HMGN2-206ENST00000467700 ZNF219Q9P2Y4 722 aaPredicted RBP21.29■■□□□ 1
HMGN2-206ENST00000467700 ABCB7O75027 752 aa21.27■■□□□ 1
HMGN2-206ENST00000467700 FOXD4L1Q9NU39 408 aa21.26■□□□□ 0.99
HMGN2-206ENST00000467700 ZBTB22O15209 634 aa21.11■□□□□ 0.97
HMGN2-206ENST00000467700 ATF5Q9Y2D1 282 aaPredicted RBP20.95■□□□□ 0.94
HMGN2-206ENST00000467700 POLA2Q14181 598 aa20.88■□□□□ 0.93
HMGN2-206ENST00000467700 ATXN8OSP0DMR3 200 aa20.52■□□□□ 0.88
HMGN2-206ENST00000467700 RBM42Q9BTD8 480 aaKnown RBP20.43■□□□□ 0.86
HMGN2-206ENST00000467700 ZBTB12Q9Y330 459 aaPredicted RBP20.36■□□□□ 0.85
HMGN2-206ENST00000467700 CSRNP3Q8WYN3 585 aa20.3■□□□□ 0.84
HMGN2-206ENST00000467700 POTEHQ6S545 545 aa20.24■□□□□ 0.83
HMGN2-206ENST00000467700 OSCARQ8IYS5 282 aa20.23■□□□□ 0.83
HMGN2-206ENST00000467700 EHMT2Q96KQ7 1210 aa20.22■□□□□ 0.83
HMGN2-206ENST00000467700 AKT1S1Q96B36 256 aa20.03■□□□□ 0.8
HMGN2-206ENST00000467700 FBLN2P98095 1184 aa20.02■□□□□ 0.8
HMGN2-206ENST00000467700 MKRN4PQ13434 485 aaPredicted RBP19.96■□□□□ 0.79
HMGN2-206ENST00000467700 CHRDL2Q6WN34 429 aa19.96■□□□□ 0.79
HMGN2-206ENST00000467700 REM2Q8IYK8 340 aaPredicted RBP19.9■□□□□ 0.78
HMGN2-206ENST00000467700 SPDYE2BA6NHP3 402 aa19.79■□□□□ 0.76
HMGN2-206ENST00000467700 SPDYE6P0CI01 402 aa19.79■□□□□ 0.76
HMGN2-206ENST00000467700 SPDYE2Q495Y8 402 aa19.79■□□□□ 0.76
HMGN2-206ENST00000467700 PITPNM1O00562 1244 aa19.7■□□□□ 0.74
HMGN2-206ENST00000467700 ZNF692Q9BU19 519 aaPredicted RBP19.64■□□□□ 0.73
HMGN2-206ENST00000467700 SSUH2Q9Y2M2 353 aa19.57■□□□□ 0.72
HMGN2-206ENST00000467700 PIP4P2Q8N4L2 257 aa19.56■□□□□ 0.72
HMGN2-206ENST00000467700 FXR2P51116 673 aaKnown RBP eCLIP19.44■□□□□ 0.7
HMGN2-206ENST00000467700 CLEC11AQ9Y240 323 aa19.44■□□□□ 0.7
HMGN2-206ENST00000467700 SPDYE1Q8NFV5 336 aaPredicted RBP19.4■□□□□ 0.7
HMGN2-206ENST00000467700 PABPN1Q86U42 306 aaKnown RBP eCLIP19.37■□□□□ 0.69
HMGN2-206ENST00000467700 PRKAR2AP13861 404 aaKnown RBP19.19■□□□□ 0.66
HMGN2-206ENST00000467700 HAX1O00165 279 aa19.15■□□□□ 0.66
HMGN2-206ENST00000467700 SPDYE4A6NLX3 237 aa19.11■□□□□ 0.65
HMGN2-206ENST00000467700 PRR29P0C7W0 189 aa19.1■□□□□ 0.65
HMGN2-206ENST00000467700 CHADLQ6NUI6 762 aa19.08■□□□□ 0.64
HMGN2-206ENST00000467700 SP7Q8TDD2 431 aaPredicted RBP19.07■□□□□ 0.64
HMGN2-206ENST00000467700 EVX2Q03828 476 aa18.98■□□□□ 0.63
HMGN2-206ENST00000467700 C19orf67A6NJJ6 358 aa18.81■□□□□ 0.6
HMGN2-206ENST00000467700 STAG3Q9UJ98 1225 aa18.8■□□□□ 0.6
HMGN2-206ENST00000467700 FARP1Q9Y4F1 1045 aaPredicted RBP18.74■□□□□ 0.59
HMGN2-206ENST00000467700 CREBZFQ9NS37 354 aa18.7■□□□□ 0.58
HMGN2-206ENST00000467700 PROM2Q8N271 834 aa18.63■□□□□ 0.57
HMGN2-206ENST00000467700 CD44P16070 742 aaKnown RBP18.59■□□□□ 0.57
HMGN2-206ENST00000467700 GABBR2O75899 941 aa18.51■□□□□ 0.55
HMGN2-206ENST00000467700 FKBP8Q14318 412 aa18.41■□□□□ 0.54
HMGN2-206ENST00000467700 MNX1P50219 401 aaPredicted RBP18.4■□□□□ 0.54
HMGN2-206ENST00000467700 ZRANB1Q9UGI0 708 aa18.38■□□□□ 0.53
HMGN2-206ENST00000467700 NPM1P06748 294 aaKnown RBP eCLIP18.3■□□□□ 0.52
HMGN2-206ENST00000467700 ZNF579Q8NAF0 562 aaKnown RBP18.27■□□□□ 0.52
HMGN2-206ENST00000467700 PAK3O75914 559 aaPredicted RBP18.21■□□□□ 0.51
HMGN2-206ENST00000467700 MIER1Q8N108 512 aa18.21■□□□□ 0.51
HMGN2-206ENST00000467700 PHF12Q96QT6 1004 aa18.17■□□□□ 0.5
HMGN2-206ENST00000467700 POTEIP0CG38 1075 aa18.15■□□□□ 0.5
HMGN2-206ENST00000467700 CLCN6P51797 869 aa18.14■□□□□ 0.49
HMGN2-206ENST00000467700 GALR2O43603 387 aaPredicted RBP18.11■□□□□ 0.49
HMGN2-206ENST00000467700 PLEKHG5O94827 1062 aa18.1■□□□□ 0.49
HMGN2-206ENST00000467700 PLCD3Q8N3E9 789 aa18.09■□□□□ 0.49
HMGN2-206ENST00000467700 TSPYL2Q9H2G4 693 aaPredicted RBP18.08■□□□□ 0.48
HMGN2-206ENST00000467700 DCBLD2Q96PD2 775 aa18.04■□□□□ 0.48
HMGN2-206ENST00000467700 RASEFQ8IZ41 740 aa17.96■□□□□ 0.47
HMGN2-206ENST00000467700 NISCHQ9Y2I1 1504 aa17.93■□□□□ 0.46
HMGN2-206ENST00000467700 CCDC61Q9Y6R9 512 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms