RNA–Protein interactions for RNA: ENST00000356654.8

ATN1-201, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,351 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-201ENST00000356654 NISCHQ9Y2I1 1504 aa25.64■■□□□ 1.7
ATN1-201ENST00000356654 DCAF8L2P0C7V8 631 aa25.27■■□□□ 1.64
ATN1-201ENST00000356654 SUPT5HO00267 1087 aaKnown RBP24.09■■□□□ 1.45
ATN1-201ENST00000356654 SHROOM4Q9ULL8 1493 aa24.02■■□□□ 1.44
ATN1-201ENST00000356654 EHMT2Q96KQ7 1210 aa23.02■■□□□ 1.28
ATN1-201ENST00000356654 FAM9AQ8IZU1 332 aaPredicted RBP22.63■■□□□ 1.21
ATN1-201ENST00000356654 TRIM41Q8WV44 630 aa22.27■■□□□ 1.16
ATN1-201ENST00000356654 PCGF6Q9BYE7 350 aa22.16■■□□□ 1.14
ATN1-201ENST00000356654 TTBK1Q5TCY1 1321 aaPredicted RBP22.14■■□□□ 1.13
ATN1-201ENST00000356654 APLP2Q06481 763 aa22.05■■□□□ 1.12
ATN1-201ENST00000356654 RANGAP1P46060 587 aaPredicted RBP22.02■■□□□ 1.12
ATN1-201ENST00000356654 ABCC9O60706 1549 aa21.89■■□□□ 1.1
ATN1-201ENST00000356654 CHIC1Q5VXU3 224 aa21.85■■□□□ 1.09
ATN1-201ENST00000356654 UBTFP17480 764 aaKnown RBP21.82■■□□□ 1.08
ATN1-201ENST00000356654 LOC105371045A0A1W2PR82 267 aa21.73■■□□□ 1.07
ATN1-201ENST00000356654 PPARGC1BQ86YN6 1023 aaKnown RBP21.67■■□□□ 1.06
ATN1-201ENST00000356654 PABPN1Q86U42 306 aaKnown RBP eCLIP21.66■■□□□ 1.06
ATN1-201ENST00000356654 ATP1B4Q9UN42 357 aaPredicted RBP21.59■■□□□ 1.05
ATN1-201ENST00000356654 CCER1Q8TC90 406 aaPredicted RBP21.48■■□□□ 1.03
ATN1-201ENST00000356654 TRIM26Q12899 539 aaPredicted RBP21.3■■□□□ 1
ATN1-201ENST00000356654 ZEB1P37275 1124 aaPredicted RBP21.29■■□□□ 1
ATN1-201ENST00000356654 ZCCHC6Q5VYS8 1495 aaKnown RBP21.28■■□□□ 1
ATN1-201ENST00000356654 HRCP23327 699 aa21.05■□□□□ 0.96
ATN1-201ENST00000356654 ITGAEP38570 1179 aa21.04■□□□□ 0.96
ATN1-201ENST00000356654 SCRIBQ14160 1630 aa21■□□□□ 0.95
ATN1-201ENST00000356654 CCDC180Q9P1Z9 1646 aa21■□□□□ 0.95
ATN1-201ENST00000356654 HNRNPUL2Q1KMD3 747 aaKnown RBP21■□□□□ 0.95
ATN1-201ENST00000356654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.88■□□□□ 0.93
ATN1-201ENST00000356654 CENPBP07199 599 aaPredicted RBP20.79■□□□□ 0.92
ATN1-201ENST00000356654 PELP1Q8IZL8 1130 aaKnown RBP20.76■□□□□ 0.91
ATN1-201ENST00000356654 YTHDC1Q96MU7 727 aaKnown RBP20.75■□□□□ 0.91
ATN1-201ENST00000356654 CSRNP3Q8WYN3 585 aa20.71■□□□□ 0.91
ATN1-201ENST00000356654 FAM50AQ14320 339 aaKnown RBP20.55■□□□□ 0.88
ATN1-201ENST00000356654 RSF1Q96T23 1441 aaPredicted RBP20.54■□□□□ 0.88
ATN1-201ENST00000356654 P3H3Q8IVL6 736 aa20.51■□□□□ 0.87
ATN1-201ENST00000356654 MYT1LQ9UL68 1186 aa20.49■□□□□ 0.87
ATN1-201ENST00000356654 FBLN2P98095 1184 aa20.46■□□□□ 0.87
ATN1-201ENST00000356654 RB1CC1Q8TDY2 1594 aa20.43■□□□□ 0.86
ATN1-201ENST00000356654 POLR3GLQ9BT43 218 aa20.39■□□□□ 0.85
ATN1-201ENST00000356654 NACADO15069 1562 aa20.36■□□□□ 0.85
ATN1-201ENST00000356654 ARID3CA6NKF2 412 aa20.34■□□□□ 0.85
ATN1-201ENST00000356654 CNGB1Q14028 1251 aaPredicted RBP20.32■□□□□ 0.84
ATN1-201ENST00000356654 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
ATN1-201ENST00000356654 DIEXFQ68CQ4 756 aaKnown RBP20.3■□□□□ 0.84
ATN1-201ENST00000356654 NEUROD1Q13562 356 aa20.3■□□□□ 0.84
ATN1-201ENST00000356654 CECR2Q9BXF3 1484 aa20.29■□□□□ 0.84
ATN1-201ENST00000356654 TRIM52Q96A61 297 aa20.27■□□□□ 0.84
ATN1-201ENST00000356654 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.84
ATN1-201ENST00000356654 NEFLP07196 543 aa20.24■□□□□ 0.83
ATN1-201ENST00000356654 BAZ1BQ9UIG0 1483 aaKnown RBP20.02■□□□□ 0.8
ATN1-201ENST00000356654 WRNQ14191 1432 aaPredicted RBP eCLIP20■□□□□ 0.795e-6■■■■■ 29.2
ATN1-201ENST00000356654 BAZ1AQ9NRL2 1556 aaPredicted RBP20■□□□□ 0.79
ATN1-201ENST00000356654 ZNF326Q5BKZ1 582 aaKnown RBP19.99■□□□□ 0.79
ATN1-201ENST00000356654 ZNF777Q9ULD5 760 aaPredicted RBP19.99■□□□□ 0.79
ATN1-201ENST00000356654 ZNF316A6NFI3 1004 aaPredicted RBP19.99■□□□□ 0.79
ATN1-201ENST00000356654 MROH2BQ7Z745 1585 aa19.97■□□□□ 0.79
ATN1-201ENST00000356654 CLIP1P30622 1438 aa19.94■□□□□ 0.78
ATN1-201ENST00000356654 ERICH6Q7L0X2 663 aa19.91■□□□□ 0.78
ATN1-201ENST00000356654 CDK11AQ9UQ88 783 aaPredicted RBP19.88■□□□□ 0.77
ATN1-201ENST00000356654 CEP162Q5TB80 1403 aa19.87■□□□□ 0.77
ATN1-201ENST00000356654 SLC4A1APQ9BWU0 796 aaKnown RBP19.85■□□□□ 0.77
ATN1-201ENST00000356654 EEA1Q15075 1411 aa19.84■□□□□ 0.77
ATN1-201ENST00000356654 CHIC2Q9UKJ5 165 aa19.82■□□□□ 0.76
ATN1-201ENST00000356654 GOLGA3Q08378 1498 aa19.8■□□□□ 0.76
ATN1-201ENST00000356654 SOGA1O94964 1423 aa19.79■□□□□ 0.76
ATN1-201ENST00000356654 CHMP7Q8WUX9 453 aaPredicted RBP19.78■□□□□ 0.76
ATN1-201ENST00000356654 CCDC88BA6NC98 1476 aa19.77■□□□□ 0.76
ATN1-201ENST00000356654 TNIKQ9UKE5 1360 aa19.75■□□□□ 0.75
ATN1-201ENST00000356654 ANP32CO43423 234 aa19.75■□□□□ 0.75
ATN1-201ENST00000356654 KIF27Q86VH2 1401 aa19.73■□□□□ 0.75
ATN1-201ENST00000356654 MTUS2Q5JR59 1369 aa19.71■□□□□ 0.75
ATN1-201ENST00000356654 GTF3C3Q9Y5Q9 886 aa19.71■□□□□ 0.75
ATN1-201ENST00000356654 CEP164Q9UPV0 1460 aa19.65■□□□□ 0.74
ATN1-201ENST00000356654 ABCC8Q09428 1581 aa19.65■□□□□ 0.74
ATN1-201ENST00000356654 WIZO95785 1651 aa19.63■□□□□ 0.73
ATN1-201ENST00000356654 TONSLQ96HA7 1378 aa19.62■□□□□ 0.73
ATN1-201ENST00000356654 BCANQ96GW7 911 aa19.61■□□□□ 0.73
ATN1-201ENST00000356654 DDX10Q13206 875 aaKnown RBP19.58■□□□□ 0.73
ATN1-201ENST00000356654 RRP7BPQ9NSQ0 103 aa19.58■□□□□ 0.72
ATN1-201ENST00000356654 HIRIP3Q9BW71 556 aaPredicted RBP19.53■□□□□ 0.72
ATN1-201ENST00000356654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.53■□□□□ 0.728e-9■■□□□ 11.8
ATN1-201ENST00000356654 ACIN1Q9UKV3 1341 aaKnown RBP19.53■□□□□ 0.72
ATN1-201ENST00000356654 CUX2O14529 1486 aa19.53■□□□□ 0.72
ATN1-201ENST00000356654 TSPY4P0CV99 314 aa19.52■□□□□ 0.71
ATN1-201ENST00000356654 TSPY10P0CW01 314 aa19.52■□□□□ 0.71
ATN1-201ENST00000356654 CARMIL1Q5VZK9 1371 aa19.51■□□□□ 0.71
ATN1-201ENST00000356654 NPM1P06748 294 aaKnown RBP eCLIP19.51■□□□□ 0.71
ATN1-201ENST00000356654 SMARCA2P51531 1590 aa19.47■□□□□ 0.71
ATN1-201ENST00000356654 KCNH8Q96L42 1107 aa19.47■□□□□ 0.71
ATN1-201ENST00000356654 TOP2AP11388 1531 aaKnown RBP19.45■□□□□ 0.7
ATN1-201ENST00000356654 CHGAP10645 457 aaKnown RBP19.44■□□□□ 0.7
ATN1-201ENST00000356654 PLEKHD1A6NEE1 506 aa19.44■□□□□ 0.7
ATN1-201ENST00000356654 ATAD2BQ9ULI0 1458 aa19.43■□□□□ 0.7
ATN1-201ENST00000356654 KDM2AQ9Y2K7 1162 aa19.41■□□□□ 0.7
ATN1-201ENST00000356654 MIER1Q8N108 512 aa19.41■□□□□ 0.7
ATN1-201ENST00000356654 TDRD9Q8NDG6 1382 aaKnown RBP19.38■□□□□ 0.69
ATN1-201ENST00000356654 KANK4Q5T7N3 995 aaPredicted RBP19.38■□□□□ 0.69
ATN1-201ENST00000356654 ERCC6Q03468 1493 aa19.38■□□□□ 0.69
ATN1-201ENST00000356654 CFDP1Q9UEE9 299 aaPredicted RBP19.35■□□□□ 0.69
ATN1-201ENST00000356654 SMARCA4P51532 1647 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms