RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 NISCHQ9Y2I1 1504 aa37.65■■■■□ 3.62
SYNCRIP-203ENST00000444272 ABCC9O60706 1549 aa36.04■■■■□ 3.36
SYNCRIP-203ENST00000444272 DNAJC5BQ9UF47 199 aa35.17■■■■□ 3.22
SYNCRIP-203ENST00000444272 CCDC180Q9P1Z9 1646 aa34.48■■■■□ 3.11
SYNCRIP-203ENST00000444272 RB1CC1Q8TDY2 1594 aa33.58■■■□□ 2.97
SYNCRIP-203ENST00000444272 DNAJC5Q9H3Z4 198 aa33.39■■■□□ 2.94
SYNCRIP-203ENST00000444272 PABPN1Q86U42 306 aaKnown RBP eCLIP33.29■■■□□ 2.92
SYNCRIP-203ENST00000444272 NACADO15069 1562 aa32.93■■■□□ 2.86
SYNCRIP-203ENST00000444272 UNC13AQ9UPW8 1703 aa32.89■■■□□ 2.86
SYNCRIP-203ENST00000444272 BICRAQ9NZM4 1560 aa32.68■■■□□ 2.82
SYNCRIP-203ENST00000444272 CECR2Q9BXF3 1484 aa32.61■■■□□ 2.81
SYNCRIP-203ENST00000444272 DCAF8L2P0C7V8 631 aa32.5■■■□□ 2.79
SYNCRIP-203ENST00000444272 CC2D2AQ9P2K1 1620 aa32.48■■■□□ 2.79
SYNCRIP-203ENST00000444272 EIF4G1Q04637 1599 aaKnown RBP32.01■■■□□ 2.71
SYNCRIP-203ENST00000444272 SHROOM4Q9ULL8 1493 aa31.99■■■□□ 2.71
SYNCRIP-203ENST00000444272 MYO15BQ96JP2 1530 aa31.91■■■□□ 2.7
SYNCRIP-203ENST00000444272 CUX2O14529 1486 aa31.65■■■□□ 2.66
SYNCRIP-203ENST00000444272 SCRIBQ14160 1630 aa31.38■■■□□ 2.61
SYNCRIP-203ENST00000444272 TRIM41Q8WV44 630 aa31.37■■■□□ 2.61
SYNCRIP-203ENST00000444272 ERCC6Q03468 1493 aa31.22■■■□□ 2.59
SYNCRIP-203ENST00000444272 DCAF1Q9Y4B6 1507 aa30.95■■■□□ 2.55
SYNCRIP-203ENST00000444272 ZCCHC6Q5VYS8 1495 aaKnown RBP30.87■■■□□ 2.53
SYNCRIP-203ENST00000444272 THOC2Q8NI27 1593 aaKnown RBP30.53■■■□□ 2.48
SYNCRIP-203ENST00000444272 NESP48681 1621 aa30.52■■■□□ 2.48
SYNCRIP-203ENST00000444272 NCAPD3P42695 1498 aa30.41■■■□□ 2.46
SYNCRIP-203ENST00000444272 SMARCA2P51531 1590 aa30.24■■■□□ 2.43
SYNCRIP-203ENST00000444272 ATAD2BQ9ULI0 1458 aa30.12■■■□□ 2.41
SYNCRIP-203ENST00000444272 KIF21AQ7Z4S6 1674 aa30.11■■■□□ 2.41
SYNCRIP-203ENST00000444272 HMGXB3Q12766 1538 aa30.07■■■□□ 2.4
SYNCRIP-203ENST00000444272 BAZ1AQ9NRL2 1556 aaPredicted RBP30.06■■■□□ 2.4
SYNCRIP-203ENST00000444272 LAMC3Q9Y6N6 1575 aa30.02■■■□□ 2.4
SYNCRIP-203ENST00000444272 OSCARQ8IYS5 282 aa29.92■■■□□ 2.38
SYNCRIP-203ENST00000444272 AEBP2Q6ZN18 517 aaPredicted RBP29.87■■■□□ 2.37
SYNCRIP-203ENST00000444272 PDS5BQ9NTI5 1447 aa29.87■■■□□ 2.37
SYNCRIP-203ENST00000444272 RIMBP3CA6NJZ7 1639 aa29.79■■■□□ 2.36
SYNCRIP-203ENST00000444272 RIMBP3BA6NNM3 1639 aa29.79■■■□□ 2.36
SYNCRIP-203ENST00000444272 RIMBP3Q9UFD9 1639 aa29.79■■■□□ 2.36
SYNCRIP-203ENST00000444272 BAZ1BQ9UIG0 1483 aaKnown RBP29.77■■■□□ 2.36
SYNCRIP-203ENST00000444272 SMARCA4P51532 1647 aa29.74■■■□□ 2.35
SYNCRIP-203ENST00000444272 MRC2Q9UBG0 1479 aa29.73■■■□□ 2.35
SYNCRIP-203ENST00000444272 WDR62O43379 1518 aa29.72■■■□□ 2.35
SYNCRIP-203ENST00000444272 TRHP20396 242 aaPredicted RBP29.58■■■□□ 2.33
SYNCRIP-203ENST00000444272 ARHGEF11O15085 1522 aa29.51■■■□□ 2.32
SYNCRIP-203ENST00000444272 CADPSQ9ULU8 1353 aa29.42■■■□□ 2.3
SYNCRIP-203ENST00000444272 PEG3Q9GZU2 1588 aa29.41■■■□□ 2.3
SYNCRIP-203ENST00000444272 CYB5RLQ6IPT4 315 aa29.38■■■□□ 2.29
SYNCRIP-203ENST00000444272 CEP164Q9UPV0 1460 aa29.31■■■□□ 2.28
SYNCRIP-203ENST00000444272 FANCD2Q9BXW9 1451 aa29.13■■■□□ 2.25
SYNCRIP-203ENST00000444272 ARAP1Q96P48 1450 aa29.11■■■□□ 2.25
SYNCRIP-203ENST00000444272 MROH2BQ7Z745 1585 aa29.02■■■□□ 2.24
SYNCRIP-203ENST00000444272 URB2Q14146 1524 aaKnown RBP29■■■□□ 2.23
SYNCRIP-203ENST00000444272 ZNF608Q9ULD9 1512 aaPredicted RBP28.91■■■□□ 2.22
SYNCRIP-203ENST00000444272 ILDR1Q86SU0 546 aaPredicted RBP28.87■■■□□ 2.21
SYNCRIP-203ENST00000444272 CHD1O14646 1710 aa28.8■■■□□ 2.2
SYNCRIP-203ENST00000444272 RSF1Q96T23 1441 aaPredicted RBP28.77■■■□□ 2.2
SYNCRIP-203ENST00000444272 CFTRP13569 1480 aa28.76■■■□□ 2.19
SYNCRIP-203ENST00000444272 IFT140Q96RY7 1462 aa28.75■■■□□ 2.19
SYNCRIP-203ENST00000444272 EIF4G3O43432 1585 aaKnown RBP28.7■■■□□ 2.18
SYNCRIP-203ENST00000444272 WIZO95785 1651 aa28.63■■■□□ 2.17
SYNCRIP-203ENST00000444272 FBLN2P98095 1184 aa28.58■■■□□ 2.17
SYNCRIP-203ENST00000444272 AQRO60306 1485 aaKnown RBP eCLIP28.44■■■□□ 2.141e-6■■■□□ 17.4
SYNCRIP-203ENST00000444272 PRDM2Q13029 1718 aa28.42■■■□□ 2.14
SYNCRIP-203ENST00000444272 TOPBP1Q92547 1522 aa28.4■■■□□ 2.14
SYNCRIP-203ENST00000444272 CLASP1Q7Z460 1538 aa28.38■■■□□ 2.13
SYNCRIP-203ENST00000444272 TARBP1Q13395 1621 aaKnown RBP28.29■■■□□ 2.12
SYNCRIP-203ENST00000444272 SYNJ1O43426 1573 aa28.21■■■□□ 2.11
SYNCRIP-203ENST00000444272 GAPVD1Q14C86 1478 aa28.21■■■□□ 2.11
SYNCRIP-203ENST00000444272 ABCC8Q09428 1581 aa28.18■■■□□ 2.1
SYNCRIP-203ENST00000444272 DNMBPQ6XZF7 1577 aa28.16■■■□□ 2.1
SYNCRIP-203ENST00000444272 SNAPC4Q5SXM2 1469 aa28.11■■■□□ 2.09
SYNCRIP-203ENST00000444272 TOP2AP11388 1531 aaKnown RBP28.11■■■□□ 2.09
SYNCRIP-203ENST00000444272 KDM4FA0A1W2PPD8 638 aa28.1■■■□□ 2.09
SYNCRIP-203ENST00000444272 CHMP7Q8WUX9 453 aaPredicted RBP28.07■■■□□ 2.08
SYNCRIP-203ENST00000444272 KIF13AQ9H1H9 1805 aa28.04■■■□□ 2.08
SYNCRIP-203ENST00000444272 POLA1P09884 1462 aaPredicted RBP28.02■■■□□ 2.08
SYNCRIP-203ENST00000444272 TDRD9Q8NDG6 1382 aaKnown RBP28■■■□□ 2.07
SYNCRIP-203ENST00000444272 RAD54L2Q9Y4B4 1467 aa27.96■■■□□ 2.07
SYNCRIP-203ENST00000444272 MAGI1Q96QZ7 1491 aaPredicted RBP27.93■■■□□ 2.06
SYNCRIP-203ENST00000444272 SYNJ2O15056 1496 aa27.87■■■□□ 2.05
SYNCRIP-203ENST00000444272 ERCC6L2Q5T890 1561 aa27.86■■■□□ 2.05
SYNCRIP-203ENST00000444272 WDR97A6NE52 1622 aa27.84■■■□□ 2.05
SYNCRIP-203ENST00000444272 SOGA1O94964 1423 aa27.84■■■□□ 2.05
SYNCRIP-203ENST00000444272 CCDC88BA6NC98 1476 aa27.81■■■□□ 2.04
SYNCRIP-203ENST00000444272 GRIN2BQ13224 1484 aa27.77■■■□□ 2.04
SYNCRIP-203ENST00000444272 KDM6BO15054 1643 aa27.72■■■□□ 2.03
SYNCRIP-203ENST00000444272 HECW2Q9P2P5 1572 aa27.68■■■□□ 2.02
SYNCRIP-203ENST00000444272 FAM69CQ0P6D2 419 aa27.66■■■□□ 2.02
SYNCRIP-203ENST00000444272 PBRM1Q86U86 1689 aa27.64■■■□□ 2.02
SYNCRIP-203ENST00000444272 CEP170Q5SW79 1584 aa27.63■■■□□ 2.01
SYNCRIP-203ENST00000444272 FGD5Q6ZNL6 1462 aa27.63■■■□□ 2.01
SYNCRIP-203ENST00000444272 ABCC10Q5T3U5 1492 aa27.61■■■□□ 2.01
SYNCRIP-203ENST00000444272 FBXO41Q8TF61 875 aa27.59■■■□□ 2.01
SYNCRIP-203ENST00000444272 DIP2BQ9P265 1576 aa27.53■■■□□ 2
SYNCRIP-203ENST00000444272 ADGRL1O94910 1474 aa27.53■■■□□ 2
SYNCRIP-203ENST00000444272 TSPOAP1O95153 1857 aa27.47■■□□□ 1.99
SYNCRIP-203ENST00000444272 SHROOM2Q13796 1616 aa27.46■■□□□ 1.99
SYNCRIP-203ENST00000444272 GRIN2AQ12879 1464 aa27.44■■□□□ 1.98
SYNCRIP-203ENST00000444272 MAPKBP1O60336 1514 aa27.42■■□□□ 1.98
SYNCRIP-203ENST00000444272 LMTK3Q96Q04 1460 aa27.39■■□□□ 1.98
SYNCRIP-203ENST00000444272 NUP160Q12769 1436 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 225 ms