RNA–Protein interactions for RNA: ENST00000434686.6

GNB1-202, Transcript of G protein subunit beta 1, humanhuman

TSL 3

Gene GNB1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNB1-202ENST00000434686 NISCHQ9Y2I1 1504 aa26.96■■□□□ 1.91
GNB1-202ENST00000434686 ABCC9O60706 1549 aa25.62■■□□□ 1.69
GNB1-202ENST00000434686 DNAJC5BQ9UF47 199 aa25■■□□□ 1.59
GNB1-202ENST00000434686 CCDC180Q9P1Z9 1646 aa24.5■■□□□ 1.51
GNB1-202ENST00000434686 RB1CC1Q8TDY2 1594 aa23.82■■□□□ 1.4
GNB1-202ENST00000434686 PABPN1Q86U42 306 aaKnown RBP eCLIP23.76■■□□□ 1.399e-8■■□□□ 11.5
GNB1-202ENST00000434686 DNAJC5Q9H3Z4 198 aa23.55■■□□□ 1.36
GNB1-202ENST00000434686 NACADO15069 1562 aa23.43■■□□□ 1.34
GNB1-202ENST00000434686 UNC13AQ9UPW8 1703 aa23.3■■□□□ 1.32
GNB1-202ENST00000434686 BICRAQ9NZM4 1560 aa23.28■■□□□ 1.32
GNB1-202ENST00000434686 DCAF8L2P0C7V8 631 aa23.24■■□□□ 1.31
GNB1-202ENST00000434686 CECR2Q9BXF3 1484 aa23.14■■□□□ 1.29
GNB1-202ENST00000434686 CC2D2AQ9P2K1 1620 aa23.04■■□□□ 1.28
GNB1-202ENST00000434686 MYO15BQ96JP2 1530 aa22.77■■□□□ 1.24
GNB1-202ENST00000434686 EIF4G1Q04637 1599 aaKnown RBP22.76■■□□□ 1.23
GNB1-202ENST00000434686 SHROOM4Q9ULL8 1493 aa22.71■■□□□ 1.23
GNB1-202ENST00000434686 SCRIBQ14160 1630 aa22.39■■□□□ 1.17
GNB1-202ENST00000434686 CUX2O14529 1486 aa22.37■■□□□ 1.17
GNB1-202ENST00000434686 TRIM41Q8WV44 630 aa22.15■■□□□ 1.14
GNB1-202ENST00000434686 DCAF1Q9Y4B6 1507 aa22.14■■□□□ 1.13
GNB1-202ENST00000434686 ZCCHC6Q5VYS8 1495 aaKnown RBP22.14■■□□□ 1.13
GNB1-202ENST00000434686 ERCC6Q03468 1493 aa22.11■■□□□ 1.13
GNB1-202ENST00000434686 NESP48681 1621 aa21.76■■□□□ 1.07
GNB1-202ENST00000434686 NCAPD3P42695 1498 aa21.71■■□□□ 1.07
GNB1-202ENST00000434686 THOC2Q8NI27 1593 aaKnown RBP21.65■■□□□ 1.06
GNB1-202ENST00000434686 ATAD2BQ9ULI0 1458 aa21.52■■□□□ 1.04
GNB1-202ENST00000434686 SMARCA2P51531 1590 aa21.47■■□□□ 1.03
GNB1-202ENST00000434686 HMGXB3Q12766 1538 aa21.4■■□□□ 1.02
GNB1-202ENST00000434686 KIF21AQ7Z4S6 1674 aa21.34■■□□□ 1.01
GNB1-202ENST00000434686 LAMC3Q9Y6N6 1575 aa21.31■■□□□ 1
GNB1-202ENST00000434686 BAZ1AQ9NRL2 1556 aaPredicted RBP21.25■□□□□ 0.99
GNB1-202ENST00000434686 PDS5BQ9NTI5 1447 aa21.24■□□□□ 0.99
GNB1-202ENST00000434686 OSCARQ8IYS5 282 aa21.23■□□□□ 0.99
GNB1-202ENST00000434686 BAZ1BQ9UIG0 1483 aaKnown RBP21.23■□□□□ 0.99
GNB1-202ENST00000434686 SMARCA4P51532 1647 aa21.22■□□□□ 0.99
GNB1-202ENST00000434686 MRC2Q9UBG0 1479 aa21.14■□□□□ 0.98
GNB1-202ENST00000434686 WDR62O43379 1518 aa21.13■□□□□ 0.97
GNB1-202ENST00000434686 RIMBP3CA6NJZ7 1639 aa21.07■□□□□ 0.96
GNB1-202ENST00000434686 RIMBP3BA6NNM3 1639 aa21.07■□□□□ 0.96
GNB1-202ENST00000434686 RIMBP3Q9UFD9 1639 aa21.07■□□□□ 0.96
GNB1-202ENST00000434686 CADPSQ9ULU8 1353 aa21.01■□□□□ 0.95
GNB1-202ENST00000434686 PEG3Q9GZU2 1588 aa21■□□□□ 0.95
GNB1-202ENST00000434686 AEBP2Q6ZN18 517 aaPredicted RBP20.96■□□□□ 0.95
GNB1-202ENST00000434686 ARHGEF11O15085 1522 aa20.92■□□□□ 0.94
GNB1-202ENST00000434686 TRHP20396 242 aaPredicted RBP20.91■□□□□ 0.94
GNB1-202ENST00000434686 CYB5RLQ6IPT4 315 aa20.86■□□□□ 0.93
GNB1-202ENST00000434686 CEP164Q9UPV0 1460 aa20.85■□□□□ 0.93
GNB1-202ENST00000434686 MROH2BQ7Z745 1585 aa20.81■□□□□ 0.92
GNB1-202ENST00000434686 FANCD2Q9BXW9 1451 aa20.77■□□□□ 0.92
GNB1-202ENST00000434686 URB2Q14146 1524 aaKnown RBP20.7■□□□□ 0.9
GNB1-202ENST00000434686 ARAP1Q96P48 1450 aa20.67■□□□□ 0.9
GNB1-202ENST00000434686 ZNF608Q9ULD9 1512 aaPredicted RBP20.63■□□□□ 0.89
GNB1-202ENST00000434686 CFTRP13569 1480 aa20.56■□□□□ 0.88
GNB1-202ENST00000434686 WIZO95785 1651 aa20.48■□□□□ 0.87
GNB1-202ENST00000434686 IFT140Q96RY7 1462 aa20.47■□□□□ 0.87
GNB1-202ENST00000434686 RSF1Q96T23 1441 aaPredicted RBP20.42■□□□□ 0.86
GNB1-202ENST00000434686 CHD1O14646 1710 aa20.39■□□□□ 0.86
GNB1-202ENST00000434686 EIF4G3O43432 1585 aaKnown RBP20.38■□□□□ 0.85
GNB1-202ENST00000434686 FBLN2P98095 1184 aa20.35■□□□□ 0.85
GNB1-202ENST00000434686 ILDR1Q86SU0 546 aaPredicted RBP20.32■□□□□ 0.84
GNB1-202ENST00000434686 AQRO60306 1485 aaKnown RBP eCLIP20.31■□□□□ 0.844e-14■■■■□ 23.4
GNB1-202ENST00000434686 TOPBP1Q92547 1522 aa20.27■□□□□ 0.83
GNB1-202ENST00000434686 CLASP1Q7Z460 1538 aa20.17■□□□□ 0.82
GNB1-202ENST00000434686 TARBP1Q13395 1621 aaKnown RBP20.16■□□□□ 0.82
GNB1-202ENST00000434686 PRDM2Q13029 1718 aa20.13■□□□□ 0.81
GNB1-202ENST00000434686 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
GNB1-202ENST00000434686 DNMBPQ6XZF7 1577 aa20.08■□□□□ 0.8
GNB1-202ENST00000434686 ABCC8Q09428 1581 aa20.06■□□□□ 0.8
GNB1-202ENST00000434686 GAPVD1Q14C86 1478 aa20.05■□□□□ 0.8
GNB1-202ENST00000434686 SNAPC4Q5SXM2 1469 aa20.05■□□□□ 0.8
GNB1-202ENST00000434686 TDRD9Q8NDG6 1382 aaKnown RBP20.04■□□□□ 0.8
GNB1-202ENST00000434686 POLA1P09884 1462 aaPredicted RBP20.02■□□□□ 0.8
GNB1-202ENST00000434686 RAD54L2Q9Y4B4 1467 aa20.01■□□□□ 0.79
GNB1-202ENST00000434686 SYNJ1O43426 1573 aa20■□□□□ 0.79
GNB1-202ENST00000434686 CHMP7Q8WUX9 453 aaPredicted RBP20■□□□□ 0.79
GNB1-202ENST00000434686 CCDC88BA6NC98 1476 aa19.96■□□□□ 0.79
GNB1-202ENST00000434686 KDM4FA0A1W2PPD8 638 aa19.95■□□□□ 0.78
GNB1-202ENST00000434686 SOGA1O94964 1423 aa19.89■□□□□ 0.77
GNB1-202ENST00000434686 ERCC6L2Q5T890 1561 aa19.87■□□□□ 0.77
GNB1-202ENST00000434686 MAGI1Q96QZ7 1491 aaPredicted RBP19.87■□□□□ 0.77
GNB1-202ENST00000434686 SYNJ2O15056 1496 aa19.86■□□□□ 0.77
GNB1-202ENST00000434686 KIF13AQ9H1H9 1805 aa19.81■□□□□ 0.76
GNB1-202ENST00000434686 GRIN2BQ13224 1484 aa19.8■□□□□ 0.76
GNB1-202ENST00000434686 WDR97A6NE52 1622 aa19.76■□□□□ 0.75
GNB1-202ENST00000434686 FGD5Q6ZNL6 1462 aa19.75■□□□□ 0.75
GNB1-202ENST00000434686 FAM69CQ0P6D2 419 aa19.67■□□□□ 0.74
GNB1-202ENST00000434686 CEP170Q5SW79 1584 aa19.66■□□□□ 0.74
GNB1-202ENST00000434686 PBRM1Q86U86 1689 aa19.62■□□□□ 0.73
GNB1-202ENST00000434686 ABCC10Q5T3U5 1492 aa19.61■□□□□ 0.73
GNB1-202ENST00000434686 CUX1P39880 1505 aa19.6■□□□□ 0.73
GNB1-202ENST00000434686 KDM6BO15054 1643 aa19.58■□□□□ 0.73
GNB1-202ENST00000434686 GRIN2AQ12879 1464 aa19.57■□□□□ 0.72
GNB1-202ENST00000434686 NUP160Q12769 1436 aa19.55■□□□□ 0.72
GNB1-202ENST00000434686 SHROOM2Q13796 1616 aa19.54■□□□□ 0.72
GNB1-202ENST00000434686 DIP2BQ9P265 1576 aa19.53■□□□□ 0.72
GNB1-202ENST00000434686 HECW2Q9P2P5 1572 aa19.53■□□□□ 0.72
GNB1-202ENST00000434686 ABCA5Q8WWZ7 1642 aa19.5■□□□□ 0.71
GNB1-202ENST00000434686 ADGRL1O94910 1474 aa19.49■□□□□ 0.71
GNB1-202ENST00000434686 MAPKBP1O60336 1514 aa19.46■□□□□ 0.71
GNB1-202ENST00000434686 PRG4Q92954 1404 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms