Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC38.99■■■■□ 3.83not detected
NKRFO15226 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC38.33■■■■□ 3.733e-6■□□□□ 8.1
NKRFO15226 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67not detected
NKRFO15226 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC37.71■■■■□ 3.633e-6■■□□□ 12
NKRFO15226 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC37.7■■■■□ 3.63not detected
NKRFO15226 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62not detected
NKRFO15226 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC37.59■■■■□ 3.617e-9■■■□□ 16.7
NKRFO15226 AL356512.1-201ENST00000607453 1739 ntBASIC37.37■■■■□ 3.57not detected
NKRFO15226 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC36.73■■■■□ 3.47not detected
NKRFO15226 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC36.52■■■■□ 3.44not detected
NKRFO15226 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC36.5■■■■□ 3.43not detected
NKRFO15226 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC36.45■■■■□ 3.433e-11■■□□□ 12.2
NKRFO15226 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC36.41■■■■□ 3.42not detected
NKRFO15226 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC36.39■■■■□ 3.425e-7■□□□□ 9.2
NKRFO15226 HES6-203ENST00000409160 1600 ntTSL 2 BASIC36.3■■■■□ 3.4not detected
NKRFO15226 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC36.13■■■■□ 3.37not detected
NKRFO15226 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC36.1■■■■□ 3.37not detected
NKRFO15226 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC36.03■■■■□ 3.36not detected
NKRFO15226 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC35.99■■■■□ 3.35not detected
NKRFO15226 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.94■■■■□ 3.342e-6■■■□□ 16.2
NKRFO15226 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33not detected
NKRFO15226 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.76■■■■□ 3.322e-6■■■□□ 16.2
NKRFO15226 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31not detected
NKRFO15226 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC35.68■■■■□ 3.3not detected
NKRFO15226 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28not detected
NKRFO15226 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC35.51■■■■□ 3.28not detected
NKRFO15226 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC35.51■■■■□ 3.27not detected
NKRFO15226 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27not detected
NKRFO15226 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC35.43■■■■□ 3.26not detected
NKRFO15226 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26not detected
NKRFO15226 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC35.39■■■■□ 3.263e-6■□□□□ 8.1
NKRFO15226 INO80B-203ENST00000409917 796 ntTSL 2 BASIC35.2■■■■□ 3.23not detected
NKRFO15226 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21not detected
NKRFO15226 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.191e-7■■■□□ 16.1
NKRFO15226 AC006077.2-201ENST00000623591 457 ntBASIC34.79■■■■□ 3.16not detected
NKRFO15226 AC015813.7-201ENST00000623294 581 ntBASIC34.77■■■■□ 3.16not detected
NKRFO15226 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC34.75■■■■□ 3.15not detected
NKRFO15226 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC34.75■■■■□ 3.15not detected
NKRFO15226 ZNRF2P1-201ENST00000441407 443 ntBASIC34.71■■■■□ 3.15not detected
NKRFO15226 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC34.7■■■■□ 3.147e-9■■■□□ 16.7
NKRFO15226 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC34.69■■■■□ 3.14not detected
NKRFO15226 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC34.67■■■■□ 3.142e-7■■□□□ 11.4
NKRFO15226 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14not detected
NKRFO15226 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC34.65■■■■□ 3.14not detected
NKRFO15226 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12not detected
NKRFO15226 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC34.54■■■■□ 3.12not detected
NKRFO15226 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC34.51■■■■□ 3.11not detected
NKRFO15226 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC34.46■■■■□ 3.113e-7■■□□□ 12.3
NKRFO15226 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC34.45■■■■□ 3.11not detected
NKRFO15226 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1not detected
NKRFO15226 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC34.37■■■■□ 3.09not detected
NKRFO15226 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC34.25■■■■□ 3.073e-7■■■■□ 24.5
NKRFO15226 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC34.16■■■■□ 3.06not detected
NKRFO15226 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC34.14■■■■□ 3.063e-6■□□□□ 8.1
NKRFO15226 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC34.13■■■■□ 3.05not detected
NKRFO15226 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC34.05■■■■□ 3.04not detected
NKRFO15226 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04not detected
NKRFO15226 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03not detected
NKRFO15226 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC33.93■■■■□ 3.02not detected
NKRFO15226 AP002365.1-201ENST00000603448 772 ntBASIC33.84■■■■□ 3.01not detected
NKRFO15226 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 39e-6■□□□□ 8.3
NKRFO15226 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99not detected
NKRFO15226 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99not detected
NKRFO15226 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC33.73■■■□□ 2.99not detected
NKRFO15226 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC33.72■■■□□ 2.99not detected
NKRFO15226 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC33.7■■■□□ 2.99not detected
NKRFO15226 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33.68■■■□□ 2.98not detected
NKRFO15226 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC33.68■■■□□ 2.98not detected
NKRFO15226 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.66■■■□□ 2.98not detected
NKRFO15226 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.983e-6■□□□□ 11.2
NKRFO15226 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.978e-9■■□□□ 13.5
NKRFO15226 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC33.61■■■□□ 2.97not detected
NKRFO15226 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC33.6■■■□□ 2.97not detected
NKRFO15226 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC33.6■■■□□ 2.972e-7■■□□□ 11.4
NKRFO15226 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC33.57■■■□□ 2.96not detected
NKRFO15226 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC33.57■■■□□ 2.96not detected
NKRFO15226 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.57■■■□□ 2.96not detected
NKRFO15226 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96not detected
NKRFO15226 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC33.54■■■□□ 2.96not detected
NKRFO15226 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC33.5■■■□□ 2.95not detected
NKRFO15226 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC33.5■■■□□ 2.95not detected
NKRFO15226 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC33.5■■■□□ 2.95not detected
NKRFO15226 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC33.49■■■□□ 2.952e-6■■■□□ 15.4
NKRFO15226 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC33.48■■■□□ 2.95not detected
NKRFO15226 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94not detected
NKRFO15226 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC33.42■■■□□ 2.94not detected
NKRFO15226 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC33.4■■■□□ 2.94not detected
NKRFO15226 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC33.39■■■□□ 2.941e-6■■■■□ 24.4
NKRFO15226 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC33.38■■■□□ 2.934e-7■■■■■ 29.4
NKRFO15226 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC33.37■■■□□ 2.931e-9■□□□□ 9.2
NKRFO15226 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC33.36■■■□□ 2.93not detected
NKRFO15226 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93not detected
NKRFO15226 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC33.3■■■□□ 2.92not detected
NKRFO15226 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC33.24■■■□□ 2.91not detected
NKRFO15226 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC33.24■■■□□ 2.91not detected
NKRFO15226 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC33.22■■■□□ 2.91not detected
NKRFO15226 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91not detected
NKRFO15226 DYNLL1-208ENST00000550178 581 ntBASIC33.21■■■□□ 2.91not detected
NKRFO15226 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9not detected
NKRFO15226 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC33.15■■■□□ 2.96e-8■■■□□ 16.9
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms