RNA–Protein interactions for RNA: ENST00000468388.5

HMGN2-207, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 3

Gene HMGN2, Length 320 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-207ENST00000468388 NISCHQ9Y2I1 1504 aa17.04■□□□□ 0.32
HMGN2-207ENST00000468388 CHIC1Q5VXU3 224 aa16.87■□□□□ 0.29
HMGN2-207ENST00000468388 AEBP2Q6ZN18 517 aaPredicted RBP16.39■□□□□ 0.21
HMGN2-207ENST00000468388 CCDC180Q9P1Z9 1646 aa15.13■□□□□ 0.01
HMGN2-207ENST00000468388 ABCC9O60706 1549 aa14.82□□□□□ -0.04
HMGN2-207ENST00000468388 PHF23Q9BUL5 403 aaPredicted RBP14.81□□□□□ -0.04
HMGN2-207ENST00000468388 NACADO15069 1562 aa14.26□□□□□ -0.13
HMGN2-207ENST00000468388 RB1CC1Q8TDY2 1594 aa14.25□□□□□ -0.13
HMGN2-207ENST00000468388 MYO15BQ96JP2 1530 aa14.2□□□□□ -0.14
HMGN2-207ENST00000468388 ZCCHC6Q5VYS8 1495 aaKnown RBP14.18□□□□□ -0.14
HMGN2-207ENST00000468388 DCAF8L2P0C7V8 631 aa14.16□□□□□ -0.14
HMGN2-207ENST00000468388 DCAF1Q9Y4B6 1507 aa14.12□□□□□ -0.15
HMGN2-207ENST00000468388 PLPPR3Q6T4P5 718 aa14.08□□□□□ -0.16
HMGN2-207ENST00000468388 SENP3Q9H4L4 574 aaPredicted RBP13.98□□□□□ -0.17
HMGN2-207ENST00000468388 UNC13AQ9UPW8 1703 aa13.93□□□□□ -0.18
HMGN2-207ENST00000468388 BICRAQ9NZM4 1560 aa13.88□□□□□ -0.19
HMGN2-207ENST00000468388 PABPN1Q86U42 306 aaKnown RBP eCLIP13.87□□□□□ -0.19
HMGN2-207ENST00000468388 SCRIBQ14160 1630 aa13.78□□□□□ -0.2
HMGN2-207ENST00000468388 DNAJC5BQ9UF47 199 aa13.72□□□□□ -0.21
HMGN2-207ENST00000468388 SHROOM4Q9ULL8 1493 aa13.71□□□□□ -0.21
HMGN2-207ENST00000468388 EIF4G1Q04637 1599 aaKnown RBP13.48□□□□□ -0.25
HMGN2-207ENST00000468388 CC2D2AQ9P2K1 1620 aa13.42□□□□□ -0.26
HMGN2-207ENST00000468388 CECR2Q9BXF3 1484 aa13.34□□□□□ -0.27
HMGN2-207ENST00000468388 SMARCA4P51532 1647 aa13.21□□□□□ -0.3
HMGN2-207ENST00000468388 NCAPD3P42695 1498 aa13.18□□□□□ -0.3
HMGN2-207ENST00000468388 BAZ1AQ9NRL2 1556 aaPredicted RBP13.18□□□□□ -0.3
HMGN2-207ENST00000468388 ATAD2BQ9ULI0 1458 aa13.16□□□□□ -0.3
HMGN2-207ENST00000468388 MROH2BQ7Z745 1585 aa13.12□□□□□ -0.31
HMGN2-207ENST00000468388 PEG3Q9GZU2 1588 aa13.12□□□□□ -0.31
HMGN2-207ENST00000468388 SMARCA2P51531 1590 aa13.11□□□□□ -0.31
HMGN2-207ENST00000468388 HMGXB3Q12766 1538 aa13.08□□□□□ -0.31
HMGN2-207ENST00000468388 BAZ1BQ9UIG0 1483 aaKnown RBP13.02□□□□□ -0.33
HMGN2-207ENST00000468388 RSF1Q96T23 1441 aaPredicted RBP12.98□□□□□ -0.33
HMGN2-207ENST00000468388 WIZO95785 1651 aa12.96□□□□□ -0.34
HMGN2-207ENST00000468388 ADRA2BP18089 450 aa12.95□□□□□ -0.34
HMGN2-207ENST00000468388 KCNA4P22459 653 aa12.89□□□□□ -0.35
HMGN2-207ENST00000468388 NESP48681 1621 aa12.84□□□□□ -0.35
HMGN2-207ENST00000468388 EHMT2Q96KQ7 1210 aa12.84□□□□□ -0.35
HMGN2-207ENST00000468388 TOP2AP11388 1531 aaKnown RBP12.83□□□□□ -0.36
HMGN2-207ENST00000468388 LAMC3Q9Y6N6 1575 aa12.79□□□□□ -0.36
HMGN2-207ENST00000468388 PPP6R1Q9UPN7 881 aa12.79□□□□□ -0.36
HMGN2-207ENST00000468388 CADPSQ9ULU8 1353 aa12.78□□□□□ -0.36
HMGN2-207ENST00000468388 ERCC6Q03468 1493 aa12.75□□□□□ -0.37
HMGN2-207ENST00000468388 FOXD1Q16676 465 aa12.75□□□□□ -0.37
HMGN2-207ENST00000468388 PDS5BQ9NTI5 1447 aa12.71□□□□□ -0.37
HMGN2-207ENST00000468388 CFTRP13569 1480 aa12.71□□□□□ -0.38
HMGN2-207ENST00000468388 CCDC88BA6NC98 1476 aa12.7□□□□□ -0.38
HMGN2-207ENST00000468388 CUX2O14529 1486 aa12.68□□□□□ -0.38
HMGN2-207ENST00000468388 KIF21AQ7Z4S6 1674 aa12.66□□□□□ -0.38
HMGN2-207ENST00000468388 THOC2Q8NI27 1593 aaKnown RBP12.65□□□□□ -0.38
HMGN2-207ENST00000468388 FANCD2Q9BXW9 1451 aa12.6□□□□□ -0.39
HMGN2-207ENST00000468388 MRC2Q9UBG0 1479 aa12.59□□□□□ -0.39
HMGN2-207ENST00000468388 CEP164Q9UPV0 1460 aa12.58□□□□□ -0.4
HMGN2-207ENST00000468388 WDR62O43379 1518 aa12.57□□□□□ -0.4
HMGN2-207ENST00000468388 PRDM2Q13029 1718 aa12.54□□□□□ -0.4
HMGN2-207ENST00000468388 SUPT5HO00267 1087 aaKnown RBP12.54□□□□□ -0.4
HMGN2-207ENST00000468388 URB2Q14146 1524 aaKnown RBP12.5□□□□□ -0.41
HMGN2-207ENST00000468388 SLC4A1APQ9BWU0 796 aaKnown RBP12.49□□□□□ -0.41
HMGN2-207ENST00000468388 NCBP3Q53F19 620 aaKnown RBP12.45□□□□□ -0.42
HMGN2-207ENST00000468388 CSRNP3Q8WYN3 585 aa12.44□□□□□ -0.42
HMGN2-207ENST00000468388 PPP4R3CPQ6ZMV5 832 aa12.43□□□□□ -0.42
HMGN2-207ENST00000468388 TOPBP1Q92547 1522 aa12.41□□□□□ -0.42
HMGN2-207ENST00000468388 ABCC8Q09428 1581 aa12.39□□□□□ -0.43
HMGN2-207ENST00000468388 DNMBPQ6XZF7 1577 aa12.38□□□□□ -0.43
HMGN2-207ENST00000468388 DNAJC5Q9H3Z4 198 aa12.36□□□□□ -0.43
HMGN2-207ENST00000468388 IFT140Q96RY7 1462 aa12.34□□□□□ -0.43
HMGN2-207ENST00000468388 CUX1P39880 1505 aa12.32□□□□□ -0.44
HMGN2-207ENST00000468388 POLA1P09884 1462 aaPredicted RBP12.31□□□□□ -0.44
HMGN2-207ENST00000468388 ZNF608Q9ULD9 1512 aaPredicted RBP12.29□□□□□ -0.44
HMGN2-207ENST00000468388 TARBP1Q13395 1621 aaKnown RBP12.29□□□□□ -0.44
HMGN2-207ENST00000468388 FGD5Q6ZNL6 1462 aa12.26□□□□□ -0.45
HMGN2-207ENST00000468388 SOGA1O94964 1423 aa12.25□□□□□ -0.45
HMGN2-207ENST00000468388 RAD54L2Q9Y4B4 1467 aa12.25□□□□□ -0.45
HMGN2-207ENST00000468388 PIAS4Q8N2W9 510 aaPredicted RBP12.23□□□□□ -0.45
HMGN2-207ENST00000468388 AQRO60306 1485 aaKnown RBP eCLIP12.21□□□□□ -0.451e-12■■■■□ 22.1
HMGN2-207ENST00000468388 EIF4G3O43432 1585 aaKnown RBP12.21□□□□□ -0.46
HMGN2-207ENST00000468388 WRNQ14191 1432 aaPredicted RBP eCLIP12.2□□□□□ -0.46
HMGN2-207ENST00000468388 TOP2BQ02880 1626 aa12.19□□□□□ -0.46
HMGN2-207ENST00000468388 TDRD9Q8NDG6 1382 aaKnown RBP12.18□□□□□ -0.46
HMGN2-207ENST00000468388 WDR97A6NE52 1622 aa12.18□□□□□ -0.46
HMGN2-207ENST00000468388 BIVM-ERCC5R4GMW8 1640 aa12.18□□□□□ -0.46
HMGN2-207ENST00000468388 SYNJ1O43426 1573 aa12.18□□□□□ -0.46
HMGN2-207ENST00000468388 ABCA10Q8WWZ4 1543 aa12.16□□□□□ -0.46
HMGN2-207ENST00000468388 OSCARQ8IYS5 282 aa12.14□□□□□ -0.47
HMGN2-207ENST00000468388 GRIN2BQ13224 1484 aa12.1□□□□□ -0.47
HMGN2-207ENST00000468388 GAPVD1Q14C86 1478 aa12.1□□□□□ -0.47
HMGN2-207ENST00000468388 NPM3O75607 178 aaKnown RBP12.1□□□□□ -0.47
HMGN2-207ENST00000468388 ABCA5Q8WWZ7 1642 aa12.1□□□□□ -0.47
HMGN2-207ENST00000468388 SNAPC4Q5SXM2 1469 aa12.08□□□□□ -0.47
HMGN2-207ENST00000468388 MAGI1Q96QZ7 1491 aaPredicted RBP12.08□□□□□ -0.48
HMGN2-207ENST00000468388 CHD1O14646 1710 aa12.05□□□□□ -0.48
HMGN2-207ENST00000468388 PBRM1Q86U86 1689 aa12.04□□□□□ -0.48
HMGN2-207ENST00000468388 SYNJ2O15056 1496 aa12.04□□□□□ -0.48
HMGN2-207ENST00000468388 FBLN2P98095 1184 aa12.01□□□□□ -0.49
HMGN2-207ENST00000468388 CHMP7Q8WUX9 453 aaPredicted RBP12□□□□□ -0.49
HMGN2-207ENST00000468388 ERICH3Q5RHP9 1530 aa12□□□□□ -0.49
HMGN2-207ENST00000468388 CNKSR2Q8WXI2 1034 aa11.99□□□□□ -0.49
HMGN2-207ENST00000468388 SCAF1Q9H7N4 1312 aaKnown RBP11.99□□□□□ -0.49
HMGN2-207ENST00000468388 ADAMTS12P58397 1594 aa11.97□□□□□ -0.49
HMGN2-207ENST00000468388 CLASP1Q7Z460 1538 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms