RNA–Protein interactions for RNA: ENST00000505505.1

PLXND1-209, Transcript of plexin D1, humanhuman

TSL 2

Gene PLXND1, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-209ENST00000505505 NISCHQ9Y2I1 1504 aa41.52■■■■■ 4.24
PLXND1-209ENST00000505505 CCDC180Q9P1Z9 1646 aa37.03■■■■□ 3.52
PLXND1-209ENST00000505505 ABCC9O60706 1549 aa36.93■■■■□ 3.5
PLXND1-209ENST00000505505 RB1CC1Q8TDY2 1594 aa35.21■■■■□ 3.23
PLXND1-209ENST00000505505 NACADO15069 1562 aa35.05■■■■□ 3.2
PLXND1-209ENST00000505505 DCAF8L2P0C7V8 631 aa35■■■■□ 3.19
PLXND1-209ENST00000505505 MYO15BQ96JP2 1530 aa34.69■■■■□ 3.14
PLXND1-209ENST00000505505 DNAJC5BQ9UF47 199 aa34.57■■■■□ 3.12
PLXND1-209ENST00000505505 PABPN1Q86U42 306 aaKnown RBP eCLIP34.5■■■■□ 3.11
PLXND1-209ENST00000505505 ZCCHC6Q5VYS8 1495 aaKnown RBP34.43■■■■□ 3.1
PLXND1-209ENST00000505505 DCAF1Q9Y4B6 1507 aa34.31■■■■□ 3.08
PLXND1-209ENST00000505505 UNC13AQ9UPW8 1703 aa34.28■■■■□ 3.08
PLXND1-209ENST00000505505 BICRAQ9NZM4 1560 aa34.2■■■■□ 3.07
PLXND1-209ENST00000505505 SCRIBQ14160 1630 aa33.78■■■■□ 3
PLXND1-209ENST00000505505 SHROOM4Q9ULL8 1493 aa33.76■■■■□ 3
PLXND1-209ENST00000505505 CC2D2AQ9P2K1 1620 aa33.33■■■□□ 2.93
PLXND1-209ENST00000505505 EIF4G1Q04637 1599 aaKnown RBP33.33■■■□□ 2.93
PLXND1-209ENST00000505505 CECR2Q9BXF3 1484 aa33.25■■■□□ 2.91
PLXND1-209ENST00000505505 NCAPD3P42695 1498 aa32.43■■■□□ 2.78
PLXND1-209ENST00000505505 ATAD2BQ9ULI0 1458 aa32.34■■■□□ 2.77
PLXND1-209ENST00000505505 SMARCA4P51532 1647 aa32.27■■■□□ 2.76
PLXND1-209ENST00000505505 SMARCA2P51531 1590 aa32.2■■■□□ 2.75
PLXND1-209ENST00000505505 BAZ1AQ9NRL2 1556 aaPredicted RBP32.17■■■□□ 2.74
PLXND1-209ENST00000505505 HMGXB3Q12766 1538 aa32.12■■■□□ 2.73
PLXND1-209ENST00000505505 PEG3Q9GZU2 1588 aa32■■■□□ 2.71
PLXND1-209ENST00000505505 MROH2BQ7Z745 1585 aa31.98■■■□□ 2.71
PLXND1-209ENST00000505505 BAZ1BQ9UIG0 1483 aaKnown RBP31.98■■■□□ 2.71
PLXND1-209ENST00000505505 ERCC6Q03468 1493 aa31.84■■■□□ 2.69
PLXND1-209ENST00000505505 NESP48681 1621 aa31.78■■■□□ 2.68
PLXND1-209ENST00000505505 CUX2O14529 1486 aa31.74■■■□□ 2.67
PLXND1-209ENST00000505505 DNAJC5Q9H3Z4 198 aa31.58■■■□□ 2.65
PLXND1-209ENST00000505505 LAMC3Q9Y6N6 1575 aa31.56■■■□□ 2.64
PLXND1-209ENST00000505505 WIZO95785 1651 aa31.54■■■□□ 2.64
PLXND1-209ENST00000505505 CADPSQ9ULU8 1353 aa31.46■■■□□ 2.63
PLXND1-209ENST00000505505 RSF1Q96T23 1441 aaPredicted RBP31.45■■■□□ 2.63
PLXND1-209ENST00000505505 PDS5BQ9NTI5 1447 aa31.45■■■□□ 2.63
PLXND1-209ENST00000505505 THOC2Q8NI27 1593 aaKnown RBP31.34■■■□□ 2.61
PLXND1-209ENST00000505505 KIF21AQ7Z4S6 1674 aa31.26■■■□□ 2.6
PLXND1-209ENST00000505505 TOP2AP11388 1531 aaKnown RBP31.19■■■□□ 2.58
PLXND1-209ENST00000505505 CFTRP13569 1480 aa31.13■■■□□ 2.57
PLXND1-209ENST00000505505 MRC2Q9UBG0 1479 aa31.12■■■□□ 2.57
PLXND1-209ENST00000505505 FANCD2Q9BXW9 1451 aa31.04■■■□□ 2.56
PLXND1-209ENST00000505505 WDR62O43379 1518 aa31.03■■■□□ 2.56
PLXND1-209ENST00000505505 CEP164Q9UPV0 1460 aa31.02■■■□□ 2.56
PLXND1-209ENST00000505505 CCDC88BA6NC98 1476 aa30.9■■■□□ 2.54
PLXND1-209ENST00000505505 URB2Q14146 1524 aaKnown RBP30.77■■■□□ 2.52
PLXND1-209ENST00000505505 PRDM2Q13029 1718 aa30.59■■■□□ 2.49
PLXND1-209ENST00000505505 TOPBP1Q92547 1522 aa30.47■■■□□ 2.47
PLXND1-209ENST00000505505 ABCC8Q09428 1581 aa30.45■■■□□ 2.46
PLXND1-209ENST00000505505 IFT140Q96RY7 1462 aa30.44■■■□□ 2.46
PLXND1-209ENST00000505505 OSCARQ8IYS5 282 aa30.42■■■□□ 2.46
PLXND1-209ENST00000505505 ZNF608Q9ULD9 1512 aaPredicted RBP30.37■■■□□ 2.45
PLXND1-209ENST00000505505 DNMBPQ6XZF7 1577 aa30.34■■■□□ 2.45
PLXND1-209ENST00000505505 SUPT5HO00267 1087 aaKnown RBP30.23■■■□□ 2.43
PLXND1-209ENST00000505505 TRIM41Q8WV44 630 aa30.22■■■□□ 2.43
PLXND1-209ENST00000505505 POLA1P09884 1462 aaPredicted RBP30.19■■■□□ 2.42
PLXND1-209ENST00000505505 TARBP1Q13395 1621 aaKnown RBP30.15■■■□□ 2.42
PLXND1-209ENST00000505505 AQRO60306 1485 aaKnown RBP eCLIP30.14■■■□□ 2.42
PLXND1-209ENST00000505505 EIF4G3O43432 1585 aaKnown RBP30.11■■■□□ 2.41
PLXND1-209ENST00000505505 SOGA1O94964 1423 aa30.1■■■□□ 2.41
PLXND1-209ENST00000505505 RAD54L2Q9Y4B4 1467 aa30.09■■■□□ 2.41
PLXND1-209ENST00000505505 CUX1P39880 1505 aa30.02■■■□□ 2.4
PLXND1-209ENST00000505505 TDRD9Q8NDG6 1382 aaKnown RBP30.02■■■□□ 2.4
PLXND1-209ENST00000505505 FGD5Q6ZNL6 1462 aa30.01■■■□□ 2.4
PLXND1-209ENST00000505505 FBLN2P98095 1184 aa29.91■■■□□ 2.38
PLXND1-209ENST00000505505 WDR97A6NE52 1622 aa29.85■■■□□ 2.37
PLXND1-209ENST00000505505 RIMBP3CA6NJZ7 1639 aa29.84■■■□□ 2.37
PLXND1-209ENST00000505505 RIMBP3BA6NNM3 1639 aa29.84■■■□□ 2.37
PLXND1-209ENST00000505505 RIMBP3Q9UFD9 1639 aa29.84■■■□□ 2.37
PLXND1-209ENST00000505505 ARHGEF11O15085 1522 aa29.82■■■□□ 2.36
PLXND1-209ENST00000505505 CHD1O14646 1710 aa29.79■■■□□ 2.36
PLXND1-209ENST00000505505 SNAPC4Q5SXM2 1469 aa29.79■■■□□ 2.36
PLXND1-209ENST00000505505 GRIN2BQ13224 1484 aa29.77■■■□□ 2.36
PLXND1-209ENST00000505505 CHMP7Q8WUX9 453 aaPredicted RBP29.75■■■□□ 2.35
PLXND1-209ENST00000505505 MAGI1Q96QZ7 1491 aaPredicted RBP29.74■■■□□ 2.35
PLXND1-209ENST00000505505 ABCA10Q8WWZ4 1543 aa29.71■■■□□ 2.35
PLXND1-209ENST00000505505 GAPVD1Q14C86 1478 aa29.7■■■□□ 2.35
PLXND1-209ENST00000505505 CYB5RLQ6IPT4 315 aa29.68■■■□□ 2.34
PLXND1-209ENST00000505505 WRNQ14191 1432 aaPredicted RBP eCLIP29.65■■■□□ 2.34
PLXND1-209ENST00000505505 SYNJ2O15056 1496 aa29.65■■■□□ 2.34
PLXND1-209ENST00000505505 TOP2BQ02880 1626 aa29.57■■■□□ 2.32
PLXND1-209ENST00000505505 ABCA5Q8WWZ7 1642 aa29.57■■■□□ 2.32
PLXND1-209ENST00000505505 CLASP1Q7Z460 1538 aa29.57■■■□□ 2.32
PLXND1-209ENST00000505505 ARAP1Q96P48 1450 aa29.55■■■□□ 2.32
PLXND1-209ENST00000505505 SYNJ1O43426 1573 aa29.54■■■□□ 2.32
PLXND1-209ENST00000505505 BIVM-ERCC5R4GMW8 1640 aa29.53■■■□□ 2.32
PLXND1-209ENST00000505505 PBRM1Q86U86 1689 aa29.51■■■□□ 2.31
PLXND1-209ENST00000505505 GRIN2AQ12879 1464 aa29.37■■■□□ 2.29
PLXND1-209ENST00000505505 FHAD1B1AJZ9 1412 aa29.35■■■□□ 2.29
PLXND1-209ENST00000505505 ADAMTS12P58397 1594 aa29.32■■■□□ 2.28
PLXND1-209ENST00000505505 ERICH3Q5RHP9 1530 aa29.31■■■□□ 2.28
PLXND1-209ENST00000505505 NUP160Q12769 1436 aa29.3■■■□□ 2.28
PLXND1-209ENST00000505505 TRHP20396 242 aaPredicted RBP29.24■■■□□ 2.27
PLXND1-209ENST00000505505 CEP170Q5SW79 1584 aa29.22■■■□□ 2.27
PLXND1-209ENST00000505505 ERCC6L2Q5T890 1561 aa29.13■■■□□ 2.25
PLXND1-209ENST00000505505 IGF1RP08069 1367 aa29.1■■■□□ 2.25
PLXND1-209ENST00000505505 SHROOM2Q13796 1616 aa29.07■■■□□ 2.24
PLXND1-209ENST00000505505 KIF27Q86VH2 1401 aa29.07■■■□□ 2.24
PLXND1-209ENST00000505505 JPH4Q96JJ6 628 aa29.07■■■□□ 2.24
PLXND1-209ENST00000505505 PRG4Q92954 1404 aaPredicted RBP29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms