RNA–Protein interactions for RNA: ENST00000460563.5

HMGN2-202, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 5

Gene HMGN2, Length 1,045 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-202ENST00000460563 AEBP2Q6ZN18 517 aaPredicted RBP33.63■■■□□ 2.97
HMGN2-202ENST00000460563 CHIC1Q5VXU3 224 aa33.14■■■□□ 2.9
HMGN2-202ENST00000460563 PHF23Q9BUL5 403 aaPredicted RBP29.26■■■□□ 2.27
HMGN2-202ENST00000460563 SENP3Q9H4L4 574 aaPredicted RBP28.35■■■□□ 2.13
HMGN2-202ENST00000460563 NISCHQ9Y2I1 1504 aa27.33■■□□□ 1.97
HMGN2-202ENST00000460563 PLPPR3Q6T4P5 718 aa27.02■■□□□ 1.92
HMGN2-202ENST00000460563 FOXD1Q16676 465 aa26.34■■□□□ 1.81
HMGN2-202ENST00000460563 PPP6R1Q9UPN7 881 aa25.69■■□□□ 1.7
HMGN2-202ENST00000460563 ADRA2BP18089 450 aa25.66■■□□□ 1.7
HMGN2-202ENST00000460563 PIAS4Q8N2W9 510 aaPredicted RBP24.89■■□□□ 1.58
HMGN2-202ENST00000460563 ABCC9O60706 1549 aa24.62■■□□□ 1.53
HMGN2-202ENST00000460563 CCDC180Q9P1Z9 1646 aa24.6■■□□□ 1.53
HMGN2-202ENST00000460563 MSH5O43196 834 aa24.04■■□□□ 1.44
HMGN2-202ENST00000460563 PPP4R3CPQ6ZMV5 832 aa23.9■■□□□ 1.42
HMGN2-202ENST00000460563 KCNA4P22459 653 aa23.83■■□□□ 1.41
HMGN2-202ENST00000460563 RB1CC1Q8TDY2 1594 aa23.39■■□□□ 1.33
HMGN2-202ENST00000460563 SCAF1Q9H7N4 1312 aaKnown RBP23.32■■□□□ 1.32
HMGN2-202ENST00000460563 NCBP3Q53F19 620 aaKnown RBP23.29■■□□□ 1.32
HMGN2-202ENST00000460563 NACADO15069 1562 aa23.19■■□□□ 1.3
HMGN2-202ENST00000460563 MAPK8IP2Q13387 824 aaPredicted RBP23.18■■□□□ 1.3
HMGN2-202ENST00000460563 CNKSR2Q8WXI2 1034 aa23.11■■□□□ 1.29
HMGN2-202ENST00000460563 DNAJC5BQ9UF47 199 aa23.1■■□□□ 1.29
HMGN2-202ENST00000460563 NPM3O75607 178 aaKnown RBP23.08■■□□□ 1.29
HMGN2-202ENST00000460563 UNC13AQ9UPW8 1703 aa23.02■■□□□ 1.28
HMGN2-202ENST00000460563 DCAF8L2P0C7V8 631 aa23.02■■□□□ 1.28
HMGN2-202ENST00000460563 PABPN1Q86U42 306 aaKnown RBP eCLIP22.87■■□□□ 1.25
HMGN2-202ENST00000460563 MYO15BQ96JP2 1530 aa22.81■■□□□ 1.24
HMGN2-202ENST00000460563 BICRAQ9NZM4 1560 aa22.77■■□□□ 1.24
HMGN2-202ENST00000460563 DMRT2Q9Y5R5 561 aa22.73■■□□□ 1.23
HMGN2-202ENST00000460563 SLC4A1APQ9BWU0 796 aaKnown RBP22.7■■□□□ 1.22
HMGN2-202ENST00000460563 ZCCHC6Q5VYS8 1495 aaKnown RBP22.67■■□□□ 1.22
HMGN2-202ENST00000460563 RNF216Q9NWF9 866 aaPredicted RBP22.57■■□□□ 1.2
HMGN2-202ENST00000460563 DCAF1Q9Y4B6 1507 aa22.53■■□□□ 1.2
HMGN2-202ENST00000460563 EHMT2Q96KQ7 1210 aa22.52■■□□□ 1.2
HMGN2-202ENST00000460563 SCRIBQ14160 1630 aa22.46■■□□□ 1.19
HMGN2-202ENST00000460563 HOXD11P31277 338 aaPredicted RBP22.41■■□□□ 1.18
HMGN2-202ENST00000460563 SHROOM4Q9ULL8 1493 aa22.33■■□□□ 1.16
HMGN2-202ENST00000460563 CC2D2AQ9P2K1 1620 aa22.26■■□□□ 1.15
HMGN2-202ENST00000460563 EIF4G1Q04637 1599 aaKnown RBP22.18■■□□□ 1.14
HMGN2-202ENST00000460563 CECR2Q9BXF3 1484 aa22.15■■□□□ 1.14
HMGN2-202ENST00000460563 CSRNP3Q8WYN3 585 aa22.12■■□□□ 1.13
HMGN2-202ENST00000460563 ZBTB22O15209 634 aa22■■□□□ 1.11
HMGN2-202ENST00000460563 FOXD4L1Q9NU39 408 aa21.76■■□□□ 1.07
HMGN2-202ENST00000460563 SLC4A2P04920 1241 aa21.73■■□□□ 1.07
HMGN2-202ENST00000460563 DCAF8L1A6NGE4 600 aa21.67■■□□□ 1.06
HMGN2-202ENST00000460563 SMARCA4P51532 1647 aa21.38■■□□□ 1.01
HMGN2-202ENST00000460563 NCAPD3P42695 1498 aa21.38■■□□□ 1.01
HMGN2-202ENST00000460563 ATAD2BQ9ULI0 1458 aa21.35■■□□□ 1.01
HMGN2-202ENST00000460563 POTEDQ86YR6 584 aa21.31■■□□□ 1
HMGN2-202ENST00000460563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.3■■□□□ 13e-13■■■□□ 16.2
HMGN2-202ENST00000460563 SMARCA2P51531 1590 aa21.28■■□□□ 1
HMGN2-202ENST00000460563 HMGXB3Q12766 1538 aa21.27■■□□□ 1
HMGN2-202ENST00000460563 MYCNP04198 464 aaPredicted RBP21.25■□□□□ 0.99
HMGN2-202ENST00000460563 ERCC6Q03468 1493 aa21.22■□□□□ 0.99
HMGN2-202ENST00000460563 BAZ1AQ9NRL2 1556 aaPredicted RBP21.21■□□□□ 0.99
HMGN2-202ENST00000460563 CUX2O14529 1486 aa21.17■□□□□ 0.98
HMGN2-202ENST00000460563 NESP48681 1621 aa21.17■□□□□ 0.98
HMGN2-202ENST00000460563 BAZ1BQ9UIG0 1483 aaKnown RBP21.15■□□□□ 0.98
HMGN2-202ENST00000460563 DNAJC5Q9H3Z4 198 aa21.15■□□□□ 0.98
HMGN2-202ENST00000460563 PEG3Q9GZU2 1588 aa21.13■□□□□ 0.97
HMGN2-202ENST00000460563 MROH2BQ7Z745 1585 aa21.1■□□□□ 0.97
HMGN2-202ENST00000460563 U3KPZ7 1027 aaPredicted RBP21.08■□□□□ 0.97
HMGN2-202ENST00000460563 THOC2Q8NI27 1593 aaKnown RBP20.99■□□□□ 0.95
HMGN2-202ENST00000460563 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
HMGN2-202ENST00000460563 LAMC3Q9Y6N6 1575 aa20.96■□□□□ 0.95
HMGN2-202ENST00000460563 ATXN8OSP0DMR3 200 aa20.94■□□□□ 0.94
HMGN2-202ENST00000460563 WIZO95785 1651 aa20.89■□□□□ 0.94
HMGN2-202ENST00000460563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.8■□□□□ 0.92
HMGN2-202ENST00000460563 HNRNPUL2Q1KMD3 747 aaKnown RBP20.8■□□□□ 0.92
HMGN2-202ENST00000460563 SAMD1Q6SPF0 538 aaPredicted RBP20.79■□□□□ 0.92
HMGN2-202ENST00000460563 ATF5Q9Y2D1 282 aaPredicted RBP20.77■□□□□ 0.92
HMGN2-202ENST00000460563 PDS5BQ9NTI5 1447 aa20.77■□□□□ 0.91
HMGN2-202ENST00000460563 CADPSQ9ULU8 1353 aa20.72■□□□□ 0.91
HMGN2-202ENST00000460563 RNF39Q9H2S5 420 aa20.7■□□□□ 0.9
HMGN2-202ENST00000460563 MRC2Q9UBG0 1479 aa20.66■□□□□ 0.9
HMGN2-202ENST00000460563 WDR62O43379 1518 aa20.63■□□□□ 0.89
HMGN2-202ENST00000460563 RSF1Q96T23 1441 aaPredicted RBP20.6■□□□□ 0.89
HMGN2-202ENST00000460563 CEP164Q9UPV0 1460 aa20.57■□□□□ 0.88
HMGN2-202ENST00000460563 TOP2AP11388 1531 aaKnown RBP20.57■□□□□ 0.88
HMGN2-202ENST00000460563 FANCD2Q9BXW9 1451 aa20.54■□□□□ 0.88
HMGN2-202ENST00000460563 CFTRP13569 1480 aa20.5■□□□□ 0.87
HMGN2-202ENST00000460563 APLP2Q06481 763 aa20.46■□□□□ 0.87
HMGN2-202ENST00000460563 PRDM2Q13029 1718 aa20.45■□□□□ 0.86
HMGN2-202ENST00000460563 URB2Q14146 1524 aaKnown RBP20.42■□□□□ 0.86
HMGN2-202ENST00000460563 C1QBPQ07021 282 aaKnown RBP20.41■□□□□ 0.86
HMGN2-202ENST00000460563 SPINK5Q9NQ38 1064 aaPredicted RBP20.4■□□□□ 0.86
HMGN2-202ENST00000460563 ZNF219Q9P2Y4 722 aaPredicted RBP20.32■□□□□ 0.84
HMGN2-202ENST00000460563 CCDC88BA6NC98 1476 aa20.31■□□□□ 0.84
HMGN2-202ENST00000460563 TRIM41Q8WV44 630 aa20.28■□□□□ 0.84
HMGN2-202ENST00000460563 TRHP20396 242 aaPredicted RBP20.22■□□□□ 0.83
HMGN2-202ENST00000460563 CAPN15O75808 1086 aa20.21■□□□□ 0.83
HMGN2-202ENST00000460563 ZNF608Q9ULD9 1512 aaPredicted RBP20.17■□□□□ 0.82
HMGN2-202ENST00000460563 TOPBP1Q92547 1522 aa20.17■□□□□ 0.82
HMGN2-202ENST00000460563 IFT140Q96RY7 1462 aa20.12■□□□□ 0.81
HMGN2-202ENST00000460563 OSCARQ8IYS5 282 aa20.12■□□□□ 0.81
HMGN2-202ENST00000460563 EIF4G3O43432 1585 aaKnown RBP20.1■□□□□ 0.81
HMGN2-202ENST00000460563 DNMBPQ6XZF7 1577 aa20.09■□□□□ 0.81
HMGN2-202ENST00000460563 RIMBP3CA6NJZ7 1639 aa20.05■□□□□ 0.8
HMGN2-202ENST00000460563 RIMBP3BA6NNM3 1639 aa20.05■□□□□ 0.8
HMGN2-202ENST00000460563 RIMBP3Q9UFD9 1639 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms