RNA–Protein interactions for RNA: ENST00000324093.8

PLXND1-201, Transcript of plexin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXND1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-201ENST00000324093 DCAF8L2P0C7V8 631 aa29.31■■■□□ 2.28
PLXND1-201ENST00000324093 SUPT5HO00267 1087 aaKnown RBP27.37■■□□□ 1.97
PLXND1-201ENST00000324093 EHMT2Q96KQ7 1210 aa27.21■■□□□ 1.95
PLXND1-201ENST00000324093 SHROOM4Q9ULL8 1493 aa27.02■■□□□ 1.92
PLXND1-201ENST00000324093 NISCHQ9Y2I1 1504 aa26.47■■□□□ 1.83
PLXND1-201ENST00000324093 TTBK1Q5TCY1 1321 aaPredicted RBP26.17■■□□□ 1.78
PLXND1-201ENST00000324093 FAM9AQ8IZU1 332 aaPredicted RBP26.02■■□□□ 1.76
PLXND1-201ENST00000324093 RANGAP1P46060 587 aaPredicted RBP25.88■■□□□ 1.73
PLXND1-201ENST00000324093 APLP2Q06481 763 aa25.86■■□□□ 1.73
PLXND1-201ENST00000324093 ATP1B4Q9UN42 357 aaPredicted RBP25.6■■□□□ 1.69
PLXND1-201ENST00000324093 PCGF6Q9BYE7 350 aa25.47■■□□□ 1.67
PLXND1-201ENST00000324093 PELP1Q8IZL8 1130 aaKnown RBP25.45■■□□□ 1.66
PLXND1-201ENST00000324093 CHIC1Q5VXU3 224 aa25.13■■□□□ 1.61
PLXND1-201ENST00000324093 MYT1LQ9UL68 1186 aa25.09■■□□□ 1.61
PLXND1-201ENST00000324093 TRIM41Q8WV44 630 aa25.08■■□□□ 1.61
PLXND1-201ENST00000324093 PPARGC1BQ86YN6 1023 aaKnown RBP25.04■■□□□ 1.6
PLXND1-201ENST00000324093 CCER1Q8TC90 406 aaPredicted RBP25.03■■□□□ 1.6
PLXND1-201ENST00000324093 UBTFP17480 764 aaKnown RBP25■■□□□ 1.59
PLXND1-201ENST00000324093 ERICH6Q7L0X2 663 aa24.83■■□□□ 1.56
PLXND1-201ENST00000324093 YTHDC1Q96MU7 727 aaKnown RBP24.81■■□□□ 1.56
PLXND1-201ENST00000324093 CENPBP07199 599 aaPredicted RBP24.62■■□□□ 1.53
PLXND1-201ENST00000324093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.6■■□□□ 1.53
PLXND1-201ENST00000324093 HNRNPUL2Q1KMD3 747 aaKnown RBP24.6■■□□□ 1.53
PLXND1-201ENST00000324093 ITGAEP38570 1179 aa24.54■■□□□ 1.52
PLXND1-201ENST00000324093 POLR3GLQ9BT43 218 aa24.47■■□□□ 1.51
PLXND1-201ENST00000324093 CNGB1Q14028 1251 aaPredicted RBP24.47■■□□□ 1.51
PLXND1-201ENST00000324093 ZEB1P37275 1124 aaPredicted RBP24.44■■□□□ 1.5
PLXND1-201ENST00000324093 NEFLP07196 543 aa24.33■■□□□ 1.49
PLXND1-201ENST00000324093 SLC4A1APQ9BWU0 796 aaKnown RBP24.27■■□□□ 1.48
PLXND1-201ENST00000324093 LOC105371045A0A1W2PR82 267 aa24.2■■□□□ 1.46
PLXND1-201ENST00000324093 PLPPR3Q6T4P5 718 aa24.08■■□□□ 1.45
PLXND1-201ENST00000324093 TRIM26Q12899 539 aaPredicted RBP23.98■■□□□ 1.43
PLXND1-201ENST00000324093 MYT1Q01538 1121 aa23.91■■□□□ 1.42
PLXND1-201ENST00000324093 FBLN2P98095 1184 aa23.83■■□□□ 1.4
PLXND1-201ENST00000324093 PABPN1Q86U42 306 aaKnown RBP eCLIP23.81■■□□□ 1.4
PLXND1-201ENST00000324093 DAXXQ9UER7 740 aaPredicted RBP23.79■■□□□ 1.4
PLXND1-201ENST00000324093 HRCP23327 699 aa23.76■■□□□ 1.39
PLXND1-201ENST00000324093 FAM50AQ14320 339 aaKnown RBP23.71■■□□□ 1.39
PLXND1-201ENST00000324093 BCANQ96GW7 911 aa23.71■■□□□ 1.39
PLXND1-201ENST00000324093 SLC24A1O60721 1099 aa23.7■■□□□ 1.38
PLXND1-201ENST00000324093 NEUROD1Q13562 356 aa23.58■■□□□ 1.37
PLXND1-201ENST00000324093 TRIM52Q96A61 297 aa23.58■■□□□ 1.37
PLXND1-201ENST00000324093 ABCC9O60706 1549 aa23.56■■□□□ 1.36
PLXND1-201ENST00000324093 BCL11AQ9H165 835 aa23.54■■□□□ 1.36
PLXND1-201ENST00000324093 ZNF326Q5BKZ1 582 aaKnown RBP23.45■■□□□ 1.35
PLXND1-201ENST00000324093 CLSPNQ9HAW4 1339 aa23.45■■□□□ 1.34
PLXND1-201ENST00000324093 ARID3CA6NKF2 412 aa23.43■■□□□ 1.34
PLXND1-201ENST00000324093 DIEXFQ68CQ4 756 aaKnown RBP23.34■■□□□ 1.33
PLXND1-201ENST00000324093 P3H3Q8IVL6 736 aa23.29■■□□□ 1.32
PLXND1-201ENST00000324093 ZNF316A6NFI3 1004 aaPredicted RBP23.27■■□□□ 1.32
PLXND1-201ENST00000324093 PLEKHG5O94827 1062 aa23.18■■□□□ 1.3
PLXND1-201ENST00000324093 A0A0G2JS52 829 aa23.12■■□□□ 1.29
PLXND1-201ENST00000324093 SENP3Q9H4L4 574 aaPredicted RBP23.11■■□□□ 1.29
PLXND1-201ENST00000324093 SCAF1Q9H7N4 1312 aaKnown RBP23.08■■□□□ 1.29
PLXND1-201ENST00000324093 ESF1Q9H501 851 aaKnown RBP23.04■■□□□ 1.28
PLXND1-201ENST00000324093 ZNF777Q9ULD5 760 aaPredicted RBP23.04■■□□□ 1.28
PLXND1-201ENST00000324093 RTL5Q5HYW3 569 aaPredicted RBP23.01■■□□□ 1.27
PLXND1-201ENST00000324093 ANP32CO43423 234 aa22.96■■□□□ 1.27
PLXND1-201ENST00000324093 CANXP27824 592 aaKnown RBP22.9■■□□□ 1.26
PLXND1-201ENST00000324093 ZBTB47Q9UFB7 747 aaPredicted RBP22.9■■□□□ 1.26
PLXND1-201ENST00000324093 STAG3Q9UJ98 1225 aa22.87■■□□□ 1.25
PLXND1-201ENST00000324093 GTF3C3Q9Y5Q9 886 aa22.87■■□□□ 1.25
PLXND1-201ENST00000324093 CHGAP10645 457 aaKnown RBP22.86■■□□□ 1.25
PLXND1-201ENST00000324093 ZBTB7CA1YPR0 619 aa22.73■■□□□ 1.23
PLXND1-201ENST00000324093 CDK11AQ9UQ88 783 aaPredicted RBP22.72■■□□□ 1.23
PLXND1-201ENST00000324093 NEFMP07197 916 aa22.68■■□□□ 1.22
PLXND1-201ENST00000324093 NPM2Q86SE8 214 aaKnown RBP22.66■■□□□ 1.22
PLXND1-201ENST00000324093 SALL2Q9Y467 1007 aaPredicted RBP22.65■■□□□ 1.22
PLXND1-201ENST00000324093 NPM1P06748 294 aaKnown RBP eCLIP22.64■■□□□ 1.21
PLXND1-201ENST00000324093 SCRIBQ14160 1630 aa22.63■■□□□ 1.21
PLXND1-201ENST00000324093 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.59■■□□□ 1.211e-6■■□□□ 14.2
PLXND1-201ENST00000324093 CSRNP3Q8WYN3 585 aa22.57■■□□□ 1.2
PLXND1-201ENST00000324093 CHIC2Q9UKJ5 165 aa22.55■■□□□ 1.2
PLXND1-201ENST00000324093 TRHP20396 242 aaPredicted RBP22.5■■□□□ 1.19
PLXND1-201ENST00000324093 C14orf37Q86TY3 774 aa22.47■■□□□ 1.19
PLXND1-201ENST00000324093 FAM9BQ8IZU0 186 aa22.46■■□□□ 1.19
PLXND1-201ENST00000324093 ARID4BQ4LE39 1312 aaPredicted RBP22.42■■□□□ 1.18
PLXND1-201ENST00000324093 KDM2AQ9Y2K7 1162 aa22.42■■□□□ 1.18
PLXND1-201ENST00000324093 DDX10Q13206 875 aaKnown RBP22.39■■□□□ 1.18
PLXND1-201ENST00000324093 FKBP8Q14318 412 aa22.36■■□□□ 1.17
PLXND1-201ENST00000324093 HIRIP3Q9BW71 556 aaPredicted RBP22.36■■□□□ 1.17
PLXND1-201ENST00000324093 HAP1P54257 671 aaPredicted RBP22.34■■□□□ 1.17
PLXND1-201ENST00000324093 TONSLQ96HA7 1378 aa22.34■■□□□ 1.17
PLXND1-201ENST00000324093 HNRNPUQ00839 825 aaKnown RBP eCLIP22.32■■□□□ 1.16
PLXND1-201ENST00000324093 ANP32AP39687 249 aaKnown RBP22.31■■□□□ 1.16
PLXND1-201ENST00000324093 ARXQ96QS3 562 aa22.28■■□□□ 1.16
PLXND1-201ENST00000324093 SENP3-EIF4A1A0A087X0R7 540 aa22.27■■□□□ 1.16
PLXND1-201ENST00000324093 HSP90AA1P07900 732 aaKnown RBP22.25■■□□□ 1.15
PLXND1-201ENST00000324093 ACIN1Q9UKV3 1341 aaKnown RBP22.25■■□□□ 1.15
PLXND1-201ENST00000324093 IRX6P78412 446 aaPredicted RBP22.19■■□□□ 1.14
PLXND1-201ENST00000324093 KCNH8Q96L42 1107 aa22.19■■□□□ 1.14
PLXND1-201ENST00000324093 TULP1O00294 542 aaPredicted RBP22.17■■□□□ 1.14
PLXND1-201ENST00000324093 TMC1Q8TDI8 760 aa22.16■■□□□ 1.14
PLXND1-201ENST00000324093 CHMP7Q8WUX9 453 aaPredicted RBP22.15■■□□□ 1.14
PLXND1-201ENST00000324093 RRP7BPQ9NSQ0 103 aa22.11■■□□□ 1.13
PLXND1-201ENST00000324093 LMOD2Q6P5Q4 547 aa22.1■■□□□ 1.13
PLXND1-201ENST00000324093 WDR43Q15061 677 aaKnown RBP eCLIP22.08■■□□□ 1.13
PLXND1-201ENST00000324093 NBR1Q14596 966 aa22.07■■□□□ 1.12
PLXND1-201ENST00000324093 TSPY4P0CV99 314 aa22.05■■□□□ 1.12
PLXND1-201ENST00000324093 TSPY10P0CW01 314 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms