RNA–Protein interactions for RNA: ENST00000555425.5

SEC23A-210, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 5

Gene SEC23A, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-210ENST00000555425 AEBP2Q6ZN18 517 aaPredicted RBP22.74■■□□□ 1.23
SEC23A-210ENST00000555425 CHIC1Q5VXU3 224 aa21.38■■□□□ 1.01
SEC23A-210ENST00000555425 SENP3Q9H4L4 574 aaPredicted RBP19.62■□□□□ 0.73
SEC23A-210ENST00000555425 PHF23Q9BUL5 403 aaPredicted RBP19.21■□□□□ 0.67
SEC23A-210ENST00000555425 FOXD1Q16676 465 aa18.27■□□□□ 0.52
SEC23A-210ENST00000555425 POTEDQ86YR6 584 aa17.96■□□□□ 0.47
SEC23A-210ENST00000555425 MSH5O43196 834 aa17.44■□□□□ 0.38
SEC23A-210ENST00000555425 PIAS4Q8N2W9 510 aaPredicted RBP16.98■□□□□ 0.31
SEC23A-210ENST00000555425 PLPPR3Q6T4P5 718 aa16.62■□□□□ 0.25
SEC23A-210ENST00000555425 PPP6R1Q9UPN7 881 aa16.57■□□□□ 0.24
SEC23A-210ENST00000555425 ADRA2BP18089 450 aa16.5■□□□□ 0.23
SEC23A-210ENST00000555425 DMRT2Q9Y5R5 561 aa15.43■□□□□ 0.06
SEC23A-210ENST00000555425 MAPK8IP2Q13387 824 aaPredicted RBP15.31■□□□□ 0.04
SEC23A-210ENST00000555425 CACNB1Q02641 598 aaPredicted RBP15.29■□□□□ 0.04
SEC23A-210ENST00000555425 SCAF1Q9H7N4 1312 aaKnown RBP15.23■□□□□ 0.03
SEC23A-210ENST00000555425 DCAF8L1A6NGE4 600 aa14.84□□□□□ -0.03
SEC23A-210ENST00000555425 RNF39Q9H2S5 420 aa14.76□□□□□ -0.05
SEC23A-210ENST00000555425 HOXD11P31277 338 aaPredicted RBP14.62□□□□□ -0.07
SEC23A-210ENST00000555425 C1QBPQ07021 282 aaKnown RBP14.56□□□□□ -0.08
SEC23A-210ENST00000555425 PPP4R3CPQ6ZMV5 832 aa14.44□□□□□ -0.1
SEC23A-210ENST00000555425 RNF216Q9NWF9 866 aaPredicted RBP14.37□□□□□ -0.11
SEC23A-210ENST00000555425 CNKSR2Q8WXI2 1034 aa14.35□□□□□ -0.11
SEC23A-210ENST00000555425 DNAJC5BQ9UF47 199 aa14.3□□□□□ -0.12
SEC23A-210ENST00000555425 POTEHQ6S545 545 aa13.98□□□□□ -0.17
SEC23A-210ENST00000555425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.95□□□□□ -0.18
SEC23A-210ENST00000555425 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
SEC23A-210ENST00000555425 DSG3P32926 999 aa13.61□□□□□ -0.23
SEC23A-210ENST00000555425 CAPN15O75808 1086 aa13.58□□□□□ -0.24
SEC23A-210ENST00000555425 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
SEC23A-210ENST00000555425 SPINK5Q9NQ38 1064 aaPredicted RBP13.51□□□□□ -0.25
SEC23A-210ENST00000555425 NPM3O75607 178 aaKnown RBP13.5□□□□□ -0.25
SEC23A-210ENST00000555425 APLP2Q06481 763 aa13.26□□□□□ -0.29
SEC23A-210ENST00000555425 ZNF219Q9P2Y4 722 aaPredicted RBP13.22□□□□□ -0.29
SEC23A-210ENST00000555425 TRHP20396 242 aaPredicted RBP13.2□□□□□ -0.3
SEC23A-210ENST00000555425 ABCB7O75027 752 aa13.17□□□□□ -0.3
SEC23A-210ENST00000555425 RBM42Q9BTD8 480 aaKnown RBP13.1□□□□□ -0.31
SEC23A-210ENST00000555425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.07□□□□□ -0.32
SEC23A-210ENST00000555425 HNRNPUL2Q1KMD3 747 aaKnown RBP13.07□□□□□ -0.32
SEC23A-210ENST00000555425 SLC4A2P04920 1241 aa13.01□□□□□ -0.33
SEC23A-210ENST00000555425 CHRDL2Q6WN34 429 aa12.99□□□□□ -0.33
SEC23A-210ENST00000555425 SAMD1Q6SPF0 538 aaPredicted RBP12.94□□□□□ -0.34
SEC23A-210ENST00000555425 SP7Q8TDD2 431 aaPredicted RBP12.84□□□□□ -0.35
SEC23A-210ENST00000555425 POLA2Q14181 598 aa12.69□□□□□ -0.38
SEC23A-210ENST00000555425 KCNA4P22459 653 aa12.68□□□□□ -0.38
SEC23A-210ENST00000555425 AKT1S1Q96B36 256 aa12.63□□□□□ -0.39
SEC23A-210ENST00000555425 MYCNP04198 464 aaPredicted RBP12.56□□□□□ -0.4
SEC23A-210ENST00000555425 PIP4P2Q8N4L2 257 aa12.52□□□□□ -0.41
SEC23A-210ENST00000555425 ZBTB12Q9Y330 459 aaPredicted RBP12.5□□□□□ -0.41
SEC23A-210ENST00000555425 HAX1O00165 279 aa12.48□□□□□ -0.41
SEC23A-210ENST00000555425 REM2Q8IYK8 340 aaPredicted RBP12.47□□□□□ -0.41
SEC23A-210ENST00000555425 FXR2P51116 673 aaKnown RBP eCLIP12.36□□□□□ -0.432e-7■■■□□ 16
SEC23A-210ENST00000555425 PITPNM1O00562 1244 aa12.34□□□□□ -0.43
SEC23A-210ENST00000555425 OSCARQ8IYS5 282 aa12.33□□□□□ -0.44
SEC23A-210ENST00000555425 ATF5Q9Y2D1 282 aaPredicted RBP12.2□□□□□ -0.46
SEC23A-210ENST00000555425 EVX2Q03828 476 aa12.18□□□□□ -0.46
SEC23A-210ENST00000555425 FOXD4L1Q9NU39 408 aa12.09□□□□□ -0.47
SEC23A-210ENST00000555425 PRKAR2AP13861 404 aaKnown RBP12.03□□□□□ -0.48
SEC23A-210ENST00000555425 LHX8Q68G74 356 aa12.02□□□□□ -0.49
SEC23A-210ENST00000555425 SPDYE2BA6NHP3 402 aa12.01□□□□□ -0.49
SEC23A-210ENST00000555425 SPDYE6P0CI01 402 aa12.01□□□□□ -0.49
SEC23A-210ENST00000555425 SPDYE2Q495Y8 402 aa12.01□□□□□ -0.49
SEC23A-210ENST00000555425 C19orf67A6NJJ6 358 aa11.99□□□□□ -0.49
SEC23A-210ENST00000555425 SPDYE1Q8NFV5 336 aaPredicted RBP11.97□□□□□ -0.49
SEC23A-210ENST00000555425 GABBR2O75899 941 aa11.95□□□□□ -0.5
SEC23A-210ENST00000555425 CLEC11AQ9Y240 323 aa11.94□□□□□ -0.5
SEC23A-210ENST00000555425 FBLN2P98095 1184 aa11.91□□□□□ -0.5
SEC23A-210ENST00000555425 SLC4A1APQ9BWU0 796 aaKnown RBP11.9□□□□□ -0.5
SEC23A-210ENST00000555425 ATXN8OSP0DMR3 200 aa11.8□□□□□ -0.52
SEC23A-210ENST00000555425 PLSCR2Q9NRY7 297 aa11.76□□□□□ -0.53
SEC23A-210ENST00000555425 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
SEC23A-210ENST00000555425 SSUH2Q9Y2M2 353 aa11.75□□□□□ -0.53
SEC23A-210ENST00000555425 CHADLQ6NUI6 762 aa11.72□□□□□ -0.53
SEC23A-210ENST00000555425 NISCHQ9Y2I1 1504 aa11.69□□□□□ -0.54
SEC23A-210ENST00000555425 CLCN6P51797 869 aa11.67□□□□□ -0.54
SEC23A-210ENST00000555425 PRR29P0C7W0 189 aa11.66□□□□□ -0.54
SEC23A-210ENST00000555425 POTEIP0CG38 1075 aa11.65□□□□□ -0.54
SEC23A-210ENST00000555425 MKRN4PQ13434 485 aaPredicted RBP11.63□□□□□ -0.55
SEC23A-210ENST00000555425 CD44P16070 742 aaKnown RBP11.62□□□□□ -0.55
SEC23A-210ENST00000555425 ZBTB22O15209 634 aa11.6□□□□□ -0.55
SEC23A-210ENST00000555425 DCBLD2Q96PD2 775 aa11.56□□□□□ -0.56
SEC23A-210ENST00000555425 PABPN1Q86U42 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
SEC23A-210ENST00000555425 FARP1Q9Y4F1 1045 aaPredicted RBP11.53□□□□□ -0.56
SEC23A-210ENST00000555425 ZNF579Q8NAF0 562 aaKnown RBP11.43□□□□□ -0.58
SEC23A-210ENST00000555425 OTUD5Q96G74 571 aa11.36□□□□□ -0.59
SEC23A-210ENST00000555425 ZRANB1Q9UGI0 708 aa11.36□□□□□ -0.59
SEC23A-210ENST00000555425 POTEMA6NI47 508 aa11.35□□□□□ -0.59
SEC23A-210ENST00000555425 POTEGQ6S5H5 508 aa11.29□□□□□ -0.6
SEC23A-210ENST00000555425 GALR2O43603 387 aaPredicted RBP11.28□□□□□ -0.6
SEC23A-210ENST00000555425 PCDH10Q9P2E7 1040 aa11.27□□□□□ -0.61
SEC23A-210ENST00000555425 POTEB2H3BUK9 544 aa11.24□□□□□ -0.61
SEC23A-210ENST00000555425 PAK3O75914 559 aaPredicted RBP11.22□□□□□ -0.61
SEC23A-210ENST00000555425 CREBZFQ9NS37 354 aa11.19□□□□□ -0.62
SEC23A-210ENST00000555425 STAG3Q9UJ98 1225 aa11.17□□□□□ -0.62
SEC23A-210ENST00000555425 PHF12Q96QT6 1004 aa11.11□□□□□ -0.63
SEC23A-210ENST00000555425 MAMSTRQ6ZN01 415 aa11.09□□□□□ -0.63
SEC23A-210ENST00000555425 PELP1Q8IZL8 1130 aaKnown RBP11.08□□□□□ -0.64
SEC23A-210ENST00000555425 METRNQ9UJH8 293 aa11.08□□□□□ -0.64
SEC23A-210ENST00000555425 SLC39A7Q92504 469 aa11.07□□□□□ -0.64
SEC23A-210ENST00000555425 NPM1P06748 294 aaKnown RBP eCLIP11.05□□□□□ -0.64
SEC23A-210ENST00000555425 C7P10643 843 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms