RNA–Protein interactions for RNA: ENST00000464888.5

HMGN2-204, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 2

Gene HMGN2, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-204ENST00000464888 NISCHQ9Y2I1 1504 aa26.26■■□□□ 1.79
HMGN2-204ENST00000464888 CCDC180Q9P1Z9 1646 aa23.43■■□□□ 1.34
HMGN2-204ENST00000464888 ABCC9O60706 1549 aa23.2■■□□□ 1.3
HMGN2-204ENST00000464888 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
HMGN2-204ENST00000464888 NACADO15069 1562 aa22.04■■□□□ 1.12
HMGN2-204ENST00000464888 DCAF8L2P0C7V8 631 aa22.03■■□□□ 1.12
HMGN2-204ENST00000464888 UNC13AQ9UPW8 1703 aa21.86■■□□□ 1.09
HMGN2-204ENST00000464888 ZCCHC6Q5VYS8 1495 aaKnown RBP21.83■■□□□ 1.08
HMGN2-204ENST00000464888 MYO15BQ96JP2 1530 aa21.78■■□□□ 1.08
HMGN2-204ENST00000464888 PABPN1Q86U42 306 aaKnown RBP eCLIP21.67■■□□□ 1.06
HMGN2-204ENST00000464888 DCAF1Q9Y4B6 1507 aa21.64■■□□□ 1.05
HMGN2-204ENST00000464888 BICRAQ9NZM4 1560 aa21.61■■□□□ 1.05
HMGN2-204ENST00000464888 DNAJC5BQ9UF47 199 aa21.6■■□□□ 1.05
HMGN2-204ENST00000464888 SCRIBQ14160 1630 aa21.44■■□□□ 1.02
HMGN2-204ENST00000464888 SHROOM4Q9ULL8 1493 aa21.11■□□□□ 0.97
HMGN2-204ENST00000464888 CC2D2AQ9P2K1 1620 aa20.99■□□□□ 0.95
HMGN2-204ENST00000464888 EIF4G1Q04637 1599 aaKnown RBP20.98■□□□□ 0.95
HMGN2-204ENST00000464888 CECR2Q9BXF3 1484 aa20.81■□□□□ 0.92
HMGN2-204ENST00000464888 SMARCA4P51532 1647 aa20.46■□□□□ 0.87
HMGN2-204ENST00000464888 ATAD2BQ9ULI0 1458 aa20.37■□□□□ 0.85
HMGN2-204ENST00000464888 NCAPD3P42695 1498 aa20.35■□□□□ 0.85
HMGN2-204ENST00000464888 BAZ1AQ9NRL2 1556 aaPredicted RBP20.32■□□□□ 0.84
HMGN2-204ENST00000464888 MROH2BQ7Z745 1585 aa20.3■□□□□ 0.84
HMGN2-204ENST00000464888 SMARCA2P51531 1590 aa20.26■□□□□ 0.83
HMGN2-204ENST00000464888 HMGXB3Q12766 1538 aa20.22■□□□□ 0.83
HMGN2-204ENST00000464888 PEG3Q9GZU2 1588 aa20.21■□□□□ 0.83
HMGN2-204ENST00000464888 BAZ1BQ9UIG0 1483 aaKnown RBP20.16■□□□□ 0.82
HMGN2-204ENST00000464888 WIZO95785 1651 aa20.12■□□□□ 0.81
HMGN2-204ENST00000464888 NESP48681 1621 aa20.07■□□□□ 0.8
HMGN2-204ENST00000464888 RSF1Q96T23 1441 aaPredicted RBP19.94■□□□□ 0.78
HMGN2-204ENST00000464888 ERCC6Q03468 1493 aa19.92■□□□□ 0.78
HMGN2-204ENST00000464888 KIF21AQ7Z4S6 1674 aa19.85■□□□□ 0.77
HMGN2-204ENST00000464888 LAMC3Q9Y6N6 1575 aa19.85■□□□□ 0.77
HMGN2-204ENST00000464888 THOC2Q8NI27 1593 aaKnown RBP19.78■□□□□ 0.76
HMGN2-204ENST00000464888 TOP2AP11388 1531 aaKnown RBP19.77■□□□□ 0.76
HMGN2-204ENST00000464888 CUX2O14529 1486 aa19.76■□□□□ 0.75
HMGN2-204ENST00000464888 CADPSQ9ULU8 1353 aa19.74■□□□□ 0.75
HMGN2-204ENST00000464888 PDS5BQ9NTI5 1447 aa19.66■□□□□ 0.74
HMGN2-204ENST00000464888 CFTRP13569 1480 aa19.6■□□□□ 0.73
HMGN2-204ENST00000464888 CCDC88BA6NC98 1476 aa19.58■□□□□ 0.72
HMGN2-204ENST00000464888 FANCD2Q9BXW9 1451 aa19.54■□□□□ 0.72
HMGN2-204ENST00000464888 MRC2Q9UBG0 1479 aa19.54■□□□□ 0.72
HMGN2-204ENST00000464888 PRDM2Q13029 1718 aa19.53■□□□□ 0.72
HMGN2-204ENST00000464888 WDR62O43379 1518 aa19.51■□□□□ 0.71
HMGN2-204ENST00000464888 CEP164Q9UPV0 1460 aa19.51■□□□□ 0.71
HMGN2-204ENST00000464888 DNAJC5Q9H3Z4 198 aa19.47■□□□□ 0.71
HMGN2-204ENST00000464888 URB2Q14146 1524 aaKnown RBP19.43■□□□□ 0.7
HMGN2-204ENST00000464888 SUPT5HO00267 1087 aaKnown RBP19.28■□□□□ 0.68
HMGN2-204ENST00000464888 TOPBP1Q92547 1522 aa19.23■□□□□ 0.67
HMGN2-204ENST00000464888 DNMBPQ6XZF7 1577 aa19.17■□□□□ 0.66
HMGN2-204ENST00000464888 ZNF608Q9ULD9 1512 aaPredicted RBP19.16■□□□□ 0.66
HMGN2-204ENST00000464888 TARBP1Q13395 1621 aaKnown RBP19.09■□□□□ 0.65
HMGN2-204ENST00000464888 IFT140Q96RY7 1462 aa19.09■□□□□ 0.65
HMGN2-204ENST00000464888 ABCC8Q09428 1581 aa19.08■□□□□ 0.65
HMGN2-204ENST00000464888 POLA1P09884 1462 aaPredicted RBP19.06■□□□□ 0.64
HMGN2-204ENST00000464888 EIF4G3O43432 1585 aaKnown RBP19.05■□□□□ 0.64
HMGN2-204ENST00000464888 CUX1P39880 1505 aa19.05■□□□□ 0.64
HMGN2-204ENST00000464888 RAD54L2Q9Y4B4 1467 aa19.03■□□□□ 0.64
HMGN2-204ENST00000464888 AQRO60306 1485 aaKnown RBP eCLIP19■□□□□ 0.639e-13■■■■□ 25.4
HMGN2-204ENST00000464888 FGD5Q6ZNL6 1462 aa18.98■□□□□ 0.63
HMGN2-204ENST00000464888 SOGA1O94964 1423 aa18.93■□□□□ 0.62
HMGN2-204ENST00000464888 CHD1O14646 1710 aa18.91■□□□□ 0.62
HMGN2-204ENST00000464888 TDRD9Q8NDG6 1382 aaKnown RBP18.91■□□□□ 0.62
HMGN2-204ENST00000464888 WDR97A6NE52 1622 aa18.9■□□□□ 0.62
HMGN2-204ENST00000464888 OSCARQ8IYS5 282 aa18.9■□□□□ 0.62
HMGN2-204ENST00000464888 SYNJ1O43426 1573 aa18.85■□□□□ 0.61
HMGN2-204ENST00000464888 BIVM-ERCC5R4GMW8 1640 aa18.81■□□□□ 0.6
HMGN2-204ENST00000464888 PBRM1Q86U86 1689 aa18.79■□□□□ 0.6
HMGN2-204ENST00000464888 TOP2BQ02880 1626 aa18.78■□□□□ 0.6
HMGN2-204ENST00000464888 SNAPC4Q5SXM2 1469 aa18.78■□□□□ 0.6
HMGN2-204ENST00000464888 TRIM41Q8WV44 630 aa18.77■□□□□ 0.6
HMGN2-204ENST00000464888 RIMBP3CA6NJZ7 1639 aa18.77■□□□□ 0.6
HMGN2-204ENST00000464888 RIMBP3BA6NNM3 1639 aa18.77■□□□□ 0.6
HMGN2-204ENST00000464888 RIMBP3Q9UFD9 1639 aa18.77■□□□□ 0.6
HMGN2-204ENST00000464888 WRNQ14191 1432 aaPredicted RBP eCLIP18.75■□□□□ 0.59
HMGN2-204ENST00000464888 ABCA5Q8WWZ7 1642 aa18.75■□□□□ 0.59
HMGN2-204ENST00000464888 ABCA10Q8WWZ4 1543 aa18.74■□□□□ 0.59
HMGN2-204ENST00000464888 FBLN2P98095 1184 aa18.74■□□□□ 0.59
HMGN2-204ENST00000464888 GRIN2BQ13224 1484 aa18.71■□□□□ 0.59
HMGN2-204ENST00000464888 GAPVD1Q14C86 1478 aa18.71■□□□□ 0.59
HMGN2-204ENST00000464888 ARHGEF11O15085 1522 aa18.69■□□□□ 0.58
HMGN2-204ENST00000464888 MAGI1Q96QZ7 1491 aaPredicted RBP18.67■□□□□ 0.58
HMGN2-204ENST00000464888 SYNJ2O15056 1496 aa18.63■□□□□ 0.57
HMGN2-204ENST00000464888 CLASP1Q7Z460 1538 aa18.62■□□□□ 0.57
HMGN2-204ENST00000464888 CHMP7Q8WUX9 453 aaPredicted RBP18.61■□□□□ 0.57
HMGN2-204ENST00000464888 ADAMTS12P58397 1594 aa18.57■□□□□ 0.56
HMGN2-204ENST00000464888 ARAP1Q96P48 1450 aa18.54■□□□□ 0.56
HMGN2-204ENST00000464888 CYB5RLQ6IPT4 315 aa18.51■□□□□ 0.55
HMGN2-204ENST00000464888 GRIN2AQ12879 1464 aa18.51■□□□□ 0.55
HMGN2-204ENST00000464888 CEP170Q5SW79 1584 aa18.51■□□□□ 0.55
HMGN2-204ENST00000464888 ERICH3Q5RHP9 1530 aa18.49■□□□□ 0.55
HMGN2-204ENST00000464888 ERCC6L2Q5T890 1561 aa18.46■□□□□ 0.55
HMGN2-204ENST00000464888 FHAD1B1AJZ9 1412 aa18.45■□□□□ 0.54
HMGN2-204ENST00000464888 NUP160Q12769 1436 aa18.43■□□□□ 0.54
HMGN2-204ENST00000464888 IGF1RP08069 1367 aa18.37■□□□□ 0.53
HMGN2-204ENST00000464888 SHROOM2Q13796 1616 aa18.37■□□□□ 0.53
HMGN2-204ENST00000464888 KIF27Q86VH2 1401 aa18.33■□□□□ 0.53
HMGN2-204ENST00000464888 RUSC2Q8N2Y8 1516 aa18.31■□□□□ 0.52
HMGN2-204ENST00000464888 CUL7Q14999 1698 aa18.3■□□□□ 0.52
HMGN2-204ENST00000464888 PRG4Q92954 1404 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms