Protein–RNA interactions for Protein: P49588

AARS, Alanine--tRNA ligase, cytoplasmic, humanhuman

Known RBP eCLIP

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AARSP49588 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.764e-7■□□□□ 8.7
AARSP49588 SLTM-202ENST00000380516 4147 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.783e-6■□□□□ 8.7
AARSP49588 SLC25A37-207ENST00000520654 3018 ntTSL 1 (best)10□□□□□ -0.819e-6■□□□□ 8.7
AARSP49588 NASP-216ENST00000528238 894 ntAPPRIS ALT2 TSL 59.98□□□□□ -0.813e-6■□□□□ 8.7
AARSP49588 HSF4-219ENST00000522027 447 ntTSL 39.87□□□□□ -0.833e-6■□□□□ 8.7
AARSP49588 AKAP9-214ENST00000493453 6020 ntTSL 29.81□□□□□ -0.841e-6■□□□□ 8.7
AARSP49588 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC9.71□□□□□ -0.851e-6■□□□□ 8.7
AARSP49588 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.911e-6■□□□□ 8.7
AARSP49588 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.919e-6■□□□□ 8.7
AARSP49588 SLTM-208ENST00000492526 3022 ntTSL 29.31□□□□□ -0.923e-6■□□□□ 8.7
AARSP49588 UBR4-201ENST00000375218 4031 ntTSL 2 BASIC9.28□□□□□ -0.921e-7■□□□□ 8.7
AARSP49588 DYNC1H1-206ENST00000555204 353 ntTSL 38.85□□□□□ -0.999e-6■□□□□ 8.7
AARSP49588 UBR4-206ENST00000419533 5583 ntTSL 58.81□□□□□ -11e-6■□□□□ 8.7
AARSP49588 NONO-212ENST00000474431 644 ntTSL 58.69□□□□□ -1.025e-8■□□□□ 8.7
AARSP49588 TCP1-212ENST00000539948 706 ntTSL 38.42□□□□□ -1.069e-6■□□□□ 8.7
AARSP49588 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.072e-9■□□□□ 8.7
AARSP49588 NIPBL-208ENST00000514335 2948 ntTSL 27.81□□□□□ -1.161e-6■□□□□ 8.7
AARSP49588 NONO-214ENST00000490044 3215 ntTSL 27.58□□□□□ -1.25e-8■□□□□ 8.7
AARSP49588 NONO-210ENST00000472185 397 ntTSL 57.23□□□□□ -1.255e-8■□□□□ 8.7
AARSP49588 SLTM-214ENST00000558052 806 ntTSL 26.68□□□□□ -1.343e-6■□□□□ 8.7
AARSP49588 PRPF4B-205ENST00000480058 6775 ntTSL 1 (best)6.54□□□□□ -1.369e-6■□□□□ 8.7
AARSP49588 TCP1-205ENST00000536394 535 ntTSL 46.47□□□□□ -1.379e-6■□□□□ 8.7
AARSP49588 BRD2-207ENST00000463639 946 ntTSL 26.41□□□□□ -1.381e-11■□□□□ 8.7
AARSP49588 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.4□□□□□ -1.383e-6■□□□□ 8.7
AARSP49588 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.489e-6■□□□□ 8.7
AARSP49588 AKAP9-207ENST00000438114 696 ntTSL 25.81□□□□□ -1.481e-6■□□□□ 8.7
AARSP49588 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.74□□□□□ -1.493e-6■□□□□ 8.7
AARSP49588 LUC7L3-205ENST00000504065 1071 ntTSL 55.61□□□□□ -1.514e-7■□□□□ 8.7
AARSP49588 NIPBL-207ENST00000513819 452 ntTSL 34.97□□□□□ -1.611e-6■□□□□ 8.7
AARSP49588 NFAT5-207ENST00000565301 653 ntTSL 24.77□□□□□ -1.653e-6■□□□□ 8.7
AARSP49588 LUC7L3-216ENST00000509487 647 ntTSL 33.93□□□□□ -1.784e-7■□□□□ 8.7
AARSP49588 TTC3-206ENST00000414818 831 ntTSL 33.51□□□□□ -1.859e-6■□□□□ 8.7
AARSP49588 TCP1-216ENST00000545764 709 ntTSL 23.42□□□□□ -1.869e-6■□□□□ 8.7
AARSP49588 SNORD48-201ENST00000364953 64 ntBASIC1.98□□□□□ -2.092e-9■□□□□ 8.7
AARSP49588 MT-TT-201ENST00000387460 66 ntBASIC1.48□□□□□ -2.172e-8■□□□□ 8.7
AARSP49588 UBE2K-207ENST00000513231 871 ntTSL 1 (best)26.04■■□□□ 1.762e-6■□□□□ 8.7
AARSP49588 UBE2K-206ENST00000510934 589 ntTSL 221.86■■□□□ 1.092e-6■□□□□ 8.7
AARSP49588 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.27■■□□□ 12e-6■□□□□ 8.7
AARSP49588 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.952e-6■□□□□ 8.7
AARSP49588 UBE2K-202ENST00000438068 2262 ntTSL 220.88■□□□□ 0.932e-6■□□□□ 8.7
AARSP49588 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.45■□□□□ 0.862e-6■□□□□ 8.7
AARSP49588 MARCH6-203ENST00000502795 580 ntTSL 414.97□□□□□ -0.012e-6■□□□□ 8.7
AARSP49588 MARCH6-209ENST00000510872 577 ntTSL 413.24□□□□□ -0.292e-6■□□□□ 8.7
AARSP49588 UBE2K-205ENST00000510719 566 ntTSL 39.45□□□□□ -0.92e-6■□□□□ 8.7
AARSP49588 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.052e-6■□□□□ 8.7
AARSP49588 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.95□□□□□ -1.782e-6■□□□□ 8.7
AARSP49588 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.99■□□□□ 0.793e-8■□□□□ 8.6
AARSP49588 RNU12-201ENST00000362512 150 ntBASIC12.95□□□□□ -0.341e-323■□□□□ 8.5
AARSP49588 Z93241.1-201ENST00000602478 664 ntBASIC11.62□□□□□ -0.551e-323■□□□□ 8.5
AARSP49588 SQSTM1-215ENST00000514093 842 ntTSL 522.09■■□□□ 1.131e-7■□□□□ 8.5
AARSP49588 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.761e-7■□□□□ 8.5
AARSP49588 SQSTM1-204ENST00000453046 572 ntTSL 419.45■□□□□ 0.71e-7■□□□□ 8.5
AARSP49588 SQSTM1-209ENST00000504627 602 ntTSL 519.45■□□□□ 0.71e-7■□□□□ 8.5
AARSP49588 SQSTM1-212ENST00000508284 578 ntTSL 419.45■□□□□ 0.71e-7■□□□□ 8.5
AARSP49588 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.541e-7■□□□□ 8.5
AARSP49588 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.61■□□□□ 0.411e-7■□□□□ 8.5
AARSP49588 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.311e-7■□□□□ 8.5
AARSP49588 SQSTM1-205ENST00000464493 532 ntTSL 415.68■□□□□ 0.11e-7■□□□□ 8.5
AARSP49588 SQSTM1-207ENST00000481335 562 ntTSL 413.22□□□□□ -0.291e-7■□□□□ 8.5
AARSP49588 SQSTM1-203ENST00000422245 628 ntTSL 412.57□□□□□ -0.41e-7■□□□□ 8.5
AARSP49588 PTMA-206ENST00000412128 863 ntTSL 326.73■■□□□ 1.871e-25■□□□□ 8.5
AARSP49588 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.11■■□□□ 1.451e-25■□□□□ 8.5
AARSP49588 PTMA-208ENST00000448874 1108 ntTSL 218.09■□□□□ 0.491e-25■□□□□ 8.5
AARSP49588 PTMA-212ENST00000481928 1635 ntTSL 318■□□□□ 0.471e-25■□□□□ 8.5
AARSP49588 PTMA-210ENST00000467816 378 ntTSL 214.56□□□□□ -0.081e-25■□□□□ 8.5
AARSP49588 PTMA-211ENST00000468027 621 ntTSL 1 (best)14.13□□□□□ -0.151e-25■□□□□ 8.5
AARSP49588 PTMA-209ENST00000466801 784 ntTSL 511.78□□□□□ -0.521e-25■□□□□ 8.5
AARSP49588 PTMA-204ENST00000409683 933 ntAPPRIS ALT1 TSL 3 BASIC11.54□□□□□ -0.561e-25■□□□□ 8.5
AARSP49588 PTMA-203ENST00000409321 735 ntTSL 3 BASIC11.22□□□□□ -0.611e-25■□□□□ 8.5
AARSP49588 PTMA-201ENST00000341369 1212 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.671e-25■□□□□ 8.5
AARSP49588 PTMA-202ENST00000409115 1221 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.761e-25■□□□□ 8.5
AARSP49588 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC14.21□□□□□ -0.132e-79■□□□□ 8.4
AARSP49588 NEAT1_1.1-201ENST00000620348 120 ntBASIC12.56□□□□□ -0.42e-79■□□□□ 8.4
AARSP49588 GOLGA2-207ENST00000470630 550 ntTSL 314.68□□□□□ -0.063e-7■□□□□ 8.4
AARSP49588 NAP1L1-223ENST00000552013 679 ntTSL 27.37□□□□□ -1.231e-41■□□□□ 8.4
AARSP49588 NAP1L1-224ENST00000552056 1981 ntTSL 54.31□□□□□ -1.721e-41■□□□□ 8.4
AARSP49588 NAP1L1-225ENST00000552147 1009 ntTSL 54.21□□□□□ -1.741e-41■□□□□ 8.4
AARSP49588 HIRA-204ENST00000464189 560 ntTSL 412.12□□□□□ -0.474e-7■□□□□ 8.4
AARSP49588 HNRNPA2B1-203ENST00000360787 1724 ntTSL 516.51■□□□□ 0.238e-35■□□□□ 8.4
AARSP49588 HNRNPA2B1-204ENST00000463181 6284 ntTSL 214.71□□□□□ -0.058e-35■□□□□ 8.4
AARSP49588 HNRNPA2B1-202ENST00000356674 1711 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.378e-35■□□□□ 8.4
AARSP49588 HNRNPA2B1-208ENST00000618183 3539 ntTSL 5 BASIC11.88□□□□□ -0.518e-35■□□□□ 8.4
AARSP49588 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.098e-35■□□□□ 8.4
AARSP49588 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.29■■□□□ 1.324e-7■□□□□ 8.4
AARSP49588 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.184e-7■□□□□ 8.4
AARSP49588 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.584e-7■□□□□ 8.4
AARSP49588 KLF3-202ENST00000482150 517 ntTSL 215.49■□□□□ 0.074e-7■□□□□ 8.4
AARSP49588 GOLGA2-209ENST00000490257 1964 ntTSL 220.04■□□□□ 0.82e-6■□□□□ 8.3
AARSP49588 GOLGA2-202ENST00000450617 1439 ntTSL 515.69■□□□□ 0.12e-6■□□□□ 8.3
AARSP49588 NOP58-203ENST00000433543 714 ntTSL 35.18□□□□□ -1.584e-9■□□□□ 8.3
AARSP49588 SNORD11B-201ENST00000607707 90 ntBASIC2.37□□□□□ -2.034e-9■□□□□ 8.3
AARSP49588 PPP1CB-208ENST00000455580 721 ntTSL 326.08■■□□□ 1.773e-8■□□□□ 8.2
AARSP49588 PPP1CB-205ENST00000420282 570 ntTSL 422.46■■□□□ 1.193e-8■□□□□ 8.2
AARSP49588 PPP1CB-206ENST00000427786 569 ntTSL 421.32■■□□□ 13e-8■□□□□ 8.2
AARSP49588 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.43e-8■□□□□ 8.2
AARSP49588 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.353e-8■□□□□ 8.2
AARSP49588 PPP1CB-207ENST00000441461 584 ntTSL 216.28■□□□□ 0.23e-8■□□□□ 8.2
AARSP49588 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.23e-8■□□□□ 8.2
AARSP49588 HNRNPH3-211ENST00000491200 2308 ntTSL 1 (best)15.77■□□□□ 0.113e-8■□□□□ 8.2
AARSP49588 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.033e-8■□□□□ 8.2
Retrieved 100 of 8,200 protein–RNA pairs in 240.8 ms