RNA–Protein interactions for RNA: ENST00000409683.5

PTMA-204, Transcript of prothymosin alpha, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene PTMA, Length 933 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-204ENST00000409683 AEBP2Q6ZN18 517 aaPredicted RBP33.31■■■□□ 2.92
PTMA-204ENST00000409683 CHIC1Q5VXU3 224 aa32.11■■■□□ 2.73
PTMA-204ENST00000409683 PHF23Q9BUL5 403 aaPredicted RBP28.28■■■□□ 2.12
PTMA-204ENST00000409683 SENP3Q9H4L4 574 aaPredicted RBP28.2■■■□□ 2.1
PTMA-204ENST00000409683 FOXD1Q16676 465 aa26.3■■□□□ 1.8
PTMA-204ENST00000409683 PLPPR3Q6T4P5 718 aa25.9■■□□□ 1.74
PTMA-204ENST00000409683 NISCHQ9Y2I1 1504 aa25.21■■□□□ 1.63
PTMA-204ENST00000409683 PPP6R1Q9UPN7 881 aa25.09■■□□□ 1.61
PTMA-204ENST00000409683 ADRA2BP18089 450 aa25.06■■□□□ 1.6
PTMA-204ENST00000409683 PIAS4Q8N2W9 510 aaPredicted RBP24.72■■□□□ 1.55
PTMA-204ENST00000409683 MSH5O43196 834 aa24.28■■□□□ 1.48
PTMA-204ENST00000409683 MAPK8IP2Q13387 824 aaPredicted RBP22.86■■□□□ 1.25
PTMA-204ENST00000409683 PPP4R3CPQ6ZMV5 832 aa22.83■■□□□ 1.25
PTMA-204ENST00000409683 POTEDQ86YR6 584 aa22.81■■□□□ 1.24
PTMA-204ENST00000409683 SCAF1Q9H7N4 1312 aaKnown RBP22.76■■□□□ 1.23
PTMA-204ENST00000409683 DMRT2Q9Y5R5 561 aa22.48■■□□□ 1.19
PTMA-204ENST00000409683 CNKSR2Q8WXI2 1034 aa22.22■■□□□ 1.15
PTMA-204ENST00000409683 CCDC180Q9P1Z9 1646 aa22.1■■□□□ 1.13
PTMA-204ENST00000409683 NCBP3Q53F19 620 aaKnown RBP22.05■■□□□ 1.12
PTMA-204ENST00000409683 KCNA4P22459 653 aa21.97■■□□□ 1.11
PTMA-204ENST00000409683 HOXD11P31277 338 aaPredicted RBP21.85■■□□□ 1.09
PTMA-204ENST00000409683 RNF216Q9NWF9 866 aaPredicted RBP21.85■■□□□ 1.09
PTMA-204ENST00000409683 NPM3O75607 178 aaKnown RBP21.83■■□□□ 1.09
PTMA-204ENST00000409683 DCAF8L1A6NGE4 600 aa21.64■■□□□ 1.05
PTMA-204ENST00000409683 ZCCHC6Q5VYS8 1495 aaKnown RBP21.12■□□□□ 0.97
PTMA-204ENST00000409683 DNAJC5BQ9UF47 199 aa21.04■□□□□ 0.96
PTMA-204ENST00000409683 ABCC9O60706 1549 aa21.02■□□□□ 0.96
PTMA-204ENST00000409683 DCAF1Q9Y4B6 1507 aa20.95■□□□□ 0.94
PTMA-204ENST00000409683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.89■□□□□ 0.931e-12■■■■□ 25.1
PTMA-204ENST00000409683 MYO15BQ96JP2 1530 aa20.85■□□□□ 0.93
PTMA-204ENST00000409683 SLC4A1APQ9BWU0 796 aaKnown RBP20.82■□□□□ 0.92
PTMA-204ENST00000409683 RNF39Q9H2S5 420 aa20.82■□□□□ 0.92
PTMA-204ENST00000409683 SLC4A2P04920 1241 aa20.7■□□□□ 0.9
PTMA-204ENST00000409683 NACADO15069 1562 aa20.68■□□□□ 0.9
PTMA-204ENST00000409683 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
PTMA-204ENST00000409683 CACNB1Q02641 598 aaPredicted RBP20.57■□□□□ 0.88
PTMA-204ENST00000409683 U3KPZ7 1027 aaPredicted RBP20.53■□□□□ 0.88
PTMA-204ENST00000409683 RB1CC1Q8TDY2 1594 aa20.51■□□□□ 0.87
PTMA-204ENST00000409683 C1QBPQ07021 282 aaKnown RBP20.5■□□□□ 0.87
PTMA-204ENST00000409683 FOXD4L1Q9NU39 408 aa20.24■□□□□ 0.83
PTMA-204ENST00000409683 ZBTB22O15209 634 aa20.23■□□□□ 0.83
PTMA-204ENST00000409683 MYCNP04198 464 aaPredicted RBP20.12■□□□□ 0.81
PTMA-204ENST00000409683 SCRIBQ14160 1630 aa20.12■□□□□ 0.81
PTMA-204ENST00000409683 SPINK5Q9NQ38 1064 aaPredicted RBP20.11■□□□□ 0.81
PTMA-204ENST00000409683 SHROOM4Q9ULL8 1493 aa20.08■□□□□ 0.81
PTMA-204ENST00000409683 UNC13AQ9UPW8 1703 aa20.05■□□□□ 0.8
PTMA-204ENST00000409683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.01■□□□□ 0.79
PTMA-204ENST00000409683 CAPN15O75808 1086 aa20.01■□□□□ 0.79
PTMA-204ENST00000409683 HNRNPUL2Q1KMD3 747 aaKnown RBP20.01■□□□□ 0.79
PTMA-204ENST00000409683 BICRAQ9NZM4 1560 aa19.96■□□□□ 0.79
PTMA-204ENST00000409683 SAMD1Q6SPF0 538 aaPredicted RBP19.96■□□□□ 0.79
PTMA-204ENST00000409683 EHMT2Q96KQ7 1210 aa19.94■□□□□ 0.78
PTMA-204ENST00000409683 APLP2Q06481 763 aa19.87■□□□□ 0.77
PTMA-204ENST00000409683 TRHP20396 242 aaPredicted RBP19.86■□□□□ 0.77
PTMA-204ENST00000409683 CSRNP3Q8WYN3 585 aa19.79■□□□□ 0.76
PTMA-204ENST00000409683 PABPN1Q86U42 306 aaKnown RBP eCLIP19.77■□□□□ 0.76
PTMA-204ENST00000409683 ATF5Q9Y2D1 282 aaPredicted RBP19.73■□□□□ 0.75
PTMA-204ENST00000409683 DSG3P32926 999 aa19.72■□□□□ 0.75
PTMA-204ENST00000409683 ZNF219Q9P2Y4 722 aaPredicted RBP19.72■□□□□ 0.75
PTMA-204ENST00000409683 ABCB7O75027 752 aa19.67■□□□□ 0.74
PTMA-204ENST00000409683 CECR2Q9BXF3 1484 aa19.56■□□□□ 0.72
PTMA-204ENST00000409683 ATXN8OSP0DMR3 200 aa19.48■□□□□ 0.71
PTMA-204ENST00000409683 BAZ1AQ9NRL2 1556 aaPredicted RBP19.44■□□□□ 0.7
PTMA-204ENST00000409683 RSF1Q96T23 1441 aaPredicted RBP19.44■□□□□ 0.7
PTMA-204ENST00000409683 POLA2Q14181 598 aa19.42■□□□□ 0.7
PTMA-204ENST00000409683 MROH2BQ7Z745 1585 aa19.41■□□□□ 0.7
PTMA-204ENST00000409683 SMARCA4P51532 1647 aa19.38■□□□□ 0.69
PTMA-204ENST00000409683 EIF4G1Q04637 1599 aaKnown RBP19.32■□□□□ 0.68
PTMA-204ENST00000409683 PEG3Q9GZU2 1588 aa19.29■□□□□ 0.68
PTMA-204ENST00000409683 SUPT5HO00267 1087 aaKnown RBP19.2■□□□□ 0.66
PTMA-204ENST00000409683 ATAD2BQ9ULI0 1458 aa19.19■□□□□ 0.66
PTMA-204ENST00000409683 WIZO95785 1651 aa19.17■□□□□ 0.66
PTMA-204ENST00000409683 NCAPD3P42695 1498 aa19.15■□□□□ 0.66
PTMA-204ENST00000409683 SMARCA2P51531 1590 aa19.15■□□□□ 0.66
PTMA-204ENST00000409683 CC2D2AQ9P2K1 1620 aa19.08■□□□□ 0.65
PTMA-204ENST00000409683 TOP2AP11388 1531 aaKnown RBP19.04■□□□□ 0.64
PTMA-204ENST00000409683 HMGXB3Q12766 1538 aa19.04■□□□□ 0.64
PTMA-204ENST00000409683 BAZ1BQ9UIG0 1483 aaKnown RBP18.97■□□□□ 0.63
PTMA-204ENST00000409683 ZBTB12Q9Y330 459 aaPredicted RBP18.95■□□□□ 0.62
PTMA-204ENST00000409683 CCDC88BA6NC98 1476 aa18.84■□□□□ 0.61
PTMA-204ENST00000409683 MKRN4PQ13434 485 aaPredicted RBP18.82■□□□□ 0.6
PTMA-204ENST00000409683 OSCARQ8IYS5 282 aa18.81■□□□□ 0.6
PTMA-204ENST00000409683 FBLN2P98095 1184 aa18.8■□□□□ 0.6
PTMA-204ENST00000409683 RBM42Q9BTD8 480 aaKnown RBP18.71■□□□□ 0.59
PTMA-204ENST00000409683 CFTRP13569 1480 aa18.6■□□□□ 0.57
PTMA-204ENST00000409683 CADPSQ9ULU8 1353 aa18.58■□□□□ 0.57
PTMA-204ENST00000409683 SPDYE2BA6NHP3 402 aa18.46■□□□□ 0.55
PTMA-204ENST00000409683 SPDYE6P0CI01 402 aa18.46■□□□□ 0.55
PTMA-204ENST00000409683 SPDYE2Q495Y8 402 aa18.46■□□□□ 0.55
PTMA-204ENST00000409683 LAMC3Q9Y6N6 1575 aa18.45■□□□□ 0.54
PTMA-204ENST00000409683 AKT1S1Q96B36 256 aa18.44■□□□□ 0.54
PTMA-204ENST00000409683 NESP48681 1621 aa18.41■□□□□ 0.54
PTMA-204ENST00000409683 ZNF692Q9BU19 519 aaPredicted RBP18.39■□□□□ 0.53
PTMA-204ENST00000409683 PRDM2Q13029 1718 aa18.37■□□□□ 0.53
PTMA-204ENST00000409683 REM2Q8IYK8 340 aaPredicted RBP18.32■□□□□ 0.52
PTMA-204ENST00000409683 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
PTMA-204ENST00000409683 FANCD2Q9BXW9 1451 aa18.3■□□□□ 0.52
PTMA-204ENST00000409683 SSUH2Q9Y2M2 353 aa18.29■□□□□ 0.52
PTMA-204ENST00000409683 WRNQ14191 1432 aaPredicted RBP eCLIP18.24■□□□□ 0.51
PTMA-204ENST00000409683 ABCC8Q09428 1581 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms