RNA–Protein interactions for RNA: ENST00000410064.5

PTMA-205, Transcript of prothymosin alpha, humanhuman

TSL 2 BASIC

Gene PTMA, Length 814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-205ENST00000410064 NISCHQ9Y2I1 1504 aa54.65■■■■■ 6.34
PTMA-205ENST00000410064 CCDC180Q9P1Z9 1646 aa48.87■■■■■ 5.41
PTMA-205ENST00000410064 ABCC9O60706 1549 aa47.98■■■■■ 5.27
PTMA-205ENST00000410064 RB1CC1Q8TDY2 1594 aa46.07■■■■■ 4.97
PTMA-205ENST00000410064 NACADO15069 1562 aa45.92■■■■■ 4.94
PTMA-205ENST00000410064 DCAF8L2P0C7V8 631 aa45.73■■■■■ 4.91
PTMA-205ENST00000410064 MYO15BQ96JP2 1530 aa45.48■■■■■ 4.87
PTMA-205ENST00000410064 ZCCHC6Q5VYS8 1495 aaKnown RBP45.47■■■■■ 4.87
PTMA-205ENST00000410064 UNC13AQ9UPW8 1703 aa45.22■■■■■ 4.83
PTMA-205ENST00000410064 DCAF1Q9Y4B6 1507 aa45.19■■■■■ 4.82
PTMA-205ENST00000410064 PABPN1Q86U42 306 aaKnown RBP eCLIP44.71■■■■■ 4.75
PTMA-205ENST00000410064 BICRAQ9NZM4 1560 aa44.68■■■■■ 4.74
PTMA-205ENST00000410064 SCRIBQ14160 1630 aa44.53■■■■■ 4.72
PTMA-205ENST00000410064 DNAJC5BQ9UF47 199 aa44.21■■■■■ 4.67
PTMA-205ENST00000410064 SHROOM4Q9ULL8 1493 aa44.13■■■■■ 4.65
PTMA-205ENST00000410064 EIF4G1Q04637 1599 aaKnown RBP43.51■■■■■ 4.56
PTMA-205ENST00000410064 CC2D2AQ9P2K1 1620 aa43.44■■■■■ 4.55
PTMA-205ENST00000410064 CECR2Q9BXF3 1484 aa43.13■■■■■ 4.49
PTMA-205ENST00000410064 SMARCA4P51532 1647 aa42.55■■■■■ 4.4
PTMA-205ENST00000410064 BAZ1AQ9NRL2 1556 aaPredicted RBP42.4■■■■■ 4.38
PTMA-205ENST00000410064 ATAD2BQ9ULI0 1458 aa42.3■■■■■ 4.36
PTMA-205ENST00000410064 SMARCA2P51531 1590 aa42.29■■■■■ 4.36
PTMA-205ENST00000410064 NCAPD3P42695 1498 aa42.29■■■■■ 4.36
PTMA-205ENST00000410064 HMGXB3Q12766 1538 aa42.14■■■■■ 4.34
PTMA-205ENST00000410064 MROH2BQ7Z745 1585 aa42.13■■■■■ 4.33
PTMA-205ENST00000410064 PEG3Q9GZU2 1588 aa42.09■■■■■ 4.33
PTMA-205ENST00000410064 BAZ1BQ9UIG0 1483 aaKnown RBP41.98■■■■■ 4.31
PTMA-205ENST00000410064 WIZO95785 1651 aa41.74■■■■■ 4.27
PTMA-205ENST00000410064 RSF1Q96T23 1441 aaPredicted RBP41.47■■■■■ 4.23
PTMA-205ENST00000410064 NESP48681 1621 aa41.44■■■■■ 4.22
PTMA-205ENST00000410064 ERCC6Q03468 1493 aa41.4■■■■■ 4.22
PTMA-205ENST00000410064 LAMC3Q9Y6N6 1575 aa41.32■■■■■ 4.2
PTMA-205ENST00000410064 TOP2AP11388 1531 aaKnown RBP41.23■■■■■ 4.19
PTMA-205ENST00000410064 KIF21AQ7Z4S6 1674 aa41.1■■■■■ 4.17
PTMA-205ENST00000410064 CUX2O14529 1486 aa41.04■■■■■ 4.16
PTMA-205ENST00000410064 CADPSQ9ULU8 1353 aa41.03■■■■■ 4.16
PTMA-205ENST00000410064 PDS5BQ9NTI5 1447 aa40.97■■■■■ 4.15
PTMA-205ENST00000410064 THOC2Q8NI27 1593 aaKnown RBP40.95■■■■■ 4.15
PTMA-205ENST00000410064 CFTRP13569 1480 aa40.75■■■■■ 4.11
PTMA-205ENST00000410064 PRDM2Q13029 1718 aa40.72■■■■■ 4.11
PTMA-205ENST00000410064 CCDC88BA6NC98 1476 aa40.69■■■■■ 4.1
PTMA-205ENST00000410064 FANCD2Q9BXW9 1451 aa40.62■■■■■ 4.09
PTMA-205ENST00000410064 MRC2Q9UBG0 1479 aa40.62■■■■■ 4.09
PTMA-205ENST00000410064 CEP164Q9UPV0 1460 aa40.62■■■■■ 4.09
PTMA-205ENST00000410064 WDR62O43379 1518 aa40.52■■■■■ 4.08
PTMA-205ENST00000410064 URB2Q14146 1524 aaKnown RBP40.24■■■■■ 4.03
PTMA-205ENST00000410064 SUPT5HO00267 1087 aaKnown RBP40.2■■■■■ 4.03
PTMA-205ENST00000410064 DNAJC5Q9H3Z4 198 aa40.05■■■■■ 4
PTMA-205ENST00000410064 TOPBP1Q92547 1522 aa39.96■■■■□ 3.99
PTMA-205ENST00000410064 DNMBPQ6XZF7 1577 aa39.93■■■■□ 3.98
PTMA-205ENST00000410064 ABCC8Q09428 1581 aa39.91■■■■□ 3.98
PTMA-205ENST00000410064 IFT140Q96RY7 1462 aa39.75■■■■□ 3.95
PTMA-205ENST00000410064 ZNF608Q9ULD9 1512 aaPredicted RBP39.6■■■■□ 3.93
PTMA-205ENST00000410064 TARBP1Q13395 1621 aaKnown RBP39.59■■■■□ 3.93
PTMA-205ENST00000410064 POLA1P09884 1462 aaPredicted RBP39.58■■■■□ 3.93
PTMA-205ENST00000410064 CUX1P39880 1505 aa39.55■■■■□ 3.92
PTMA-205ENST00000410064 EIF4G3O43432 1585 aaKnown RBP39.53■■■■□ 3.92
PTMA-205ENST00000410064 FGD5Q6ZNL6 1462 aa39.46■■■■□ 3.91
PTMA-205ENST00000410064 RAD54L2Q9Y4B4 1467 aa39.41■■■■□ 3.9
PTMA-205ENST00000410064 SOGA1O94964 1423 aa39.38■■■■□ 3.89
PTMA-205ENST00000410064 AQRO60306 1485 aaKnown RBP eCLIP39.32■■■■□ 3.896e-22■■■■■ 42
PTMA-205ENST00000410064 WDR97A6NE52 1622 aa39.28■■■■□ 3.88
PTMA-205ENST00000410064 OSCARQ8IYS5 282 aa39.21■■■■□ 3.87
PTMA-205ENST00000410064 BIVM-ERCC5R4GMW8 1640 aa39.21■■■■□ 3.87
PTMA-205ENST00000410064 CHD1O14646 1710 aa39.2■■■■□ 3.87
PTMA-205ENST00000410064 TDRD9Q8NDG6 1382 aaKnown RBP39.19■■■■□ 3.86
PTMA-205ENST00000410064 TOP2BQ02880 1626 aa39.16■■■■□ 3.86
PTMA-205ENST00000410064 SYNJ1O43426 1573 aa39.14■■■■□ 3.86
PTMA-205ENST00000410064 WRNQ14191 1432 aaPredicted RBP eCLIP39.14■■■■□ 3.86
PTMA-205ENST00000410064 PBRM1Q86U86 1689 aa39.07■■■■□ 3.85
PTMA-205ENST00000410064 ABCA10Q8WWZ4 1543 aa39.04■■■■□ 3.84
PTMA-205ENST00000410064 ABCA5Q8WWZ7 1642 aa39■■■■□ 3.83
PTMA-205ENST00000410064 SNAPC4Q5SXM2 1469 aa38.99■■■■□ 3.83
PTMA-205ENST00000410064 GRIN2BQ13224 1484 aa38.98■■■■□ 3.83
PTMA-205ENST00000410064 GAPVD1Q14C86 1478 aa38.95■■■■□ 3.83
PTMA-205ENST00000410064 MAGI1Q96QZ7 1491 aaPredicted RBP38.92■■■■□ 3.82
PTMA-205ENST00000410064 FBLN2P98095 1184 aa38.9■■■■□ 3.82
PTMA-205ENST00000410064 RIMBP3CA6NJZ7 1639 aa38.78■■■■□ 3.8
PTMA-205ENST00000410064 RIMBP3BA6NNM3 1639 aa38.78■■■■□ 3.8
PTMA-205ENST00000410064 RIMBP3Q9UFD9 1639 aa38.78■■■■□ 3.8
PTMA-205ENST00000410064 SYNJ2O15056 1496 aa38.77■■■■□ 3.8
PTMA-205ENST00000410064 CHMP7Q8WUX9 453 aaPredicted RBP38.72■■■■□ 3.79
PTMA-205ENST00000410064 ARHGEF11O15085 1522 aa38.68■■■■□ 3.78
PTMA-205ENST00000410064 TRIM41Q8WV44 630 aa38.67■■■■□ 3.78
PTMA-205ENST00000410064 ADAMTS12P58397 1594 aa38.64■■■■□ 3.78
PTMA-205ENST00000410064 CLASP1Q7Z460 1538 aa38.61■■■■□ 3.77
PTMA-205ENST00000410064 ERICH3Q5RHP9 1530 aa38.58■■■■□ 3.77
PTMA-205ENST00000410064 GRIN2AQ12879 1464 aa38.49■■■■□ 3.75
PTMA-205ENST00000410064 FHAD1B1AJZ9 1412 aa38.46■■■■□ 3.75
PTMA-205ENST00000410064 CEP170Q5SW79 1584 aa38.36■■■■□ 3.73
PTMA-205ENST00000410064 KIF27Q86VH2 1401 aa38.34■■■■□ 3.73
PTMA-205ENST00000410064 ARAP1Q96P48 1450 aa38.34■■■■□ 3.73
PTMA-205ENST00000410064 NUP160Q12769 1436 aa38.3■■■■□ 3.72
PTMA-205ENST00000410064 CUL7Q14999 1698 aa38.27■■■■□ 3.72
PTMA-205ENST00000410064 CYB5RLQ6IPT4 315 aa38.25■■■■□ 3.71
PTMA-205ENST00000410064 IGF1RP08069 1367 aa38.17■■■■□ 3.7
PTMA-205ENST00000410064 SHROOM2Q13796 1616 aa38.15■■■■□ 3.7
PTMA-205ENST00000410064 RUSC2Q8N2Y8 1516 aa38.08■■■■□ 3.69
PTMA-205ENST00000410064 ERCC6L2Q5T890 1561 aa38.06■■■■□ 3.68
PTMA-205ENST00000410064 CARMIL1Q5VZK9 1371 aa37.97■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms