RNA–Protein interactions for RNA: ENST00000414818.1

TTC3-206, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-206ENST00000414818 AEBP2Q6ZN18 517 aaPredicted RBP20.49■□□□□ 0.87
TTC3-206ENST00000414818 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
TTC3-206ENST00000414818 SENP3Q9H4L4 574 aaPredicted RBP17.46■□□□□ 0.39
TTC3-206ENST00000414818 PHF23Q9BUL5 403 aaPredicted RBP17.41■□□□□ 0.38
TTC3-206ENST00000414818 FOXD1Q16676 465 aa16.21■□□□□ 0.19
TTC3-206ENST00000414818 POTEDQ86YR6 584 aa16.11■□□□□ 0.17
TTC3-206ENST00000414818 PLPPR3Q6T4P5 718 aa16.03■□□□□ 0.16
TTC3-206ENST00000414818 MSH5O43196 834 aa15.45■□□□□ 0.06
TTC3-206ENST00000414818 PPP6R1Q9UPN7 881 aa15.42■□□□□ 0.06
TTC3-206ENST00000414818 ADRA2BP18089 450 aa15.39■□□□□ 0.05
TTC3-206ENST00000414818 PIAS4Q8N2W9 510 aaPredicted RBP15.23■□□□□ 0.03
TTC3-206ENST00000414818 SCAF1Q9H7N4 1312 aaKnown RBP14.15□□□□□ -0.15
TTC3-206ENST00000414818 PPP4R3CPQ6ZMV5 832 aa14.09□□□□□ -0.15
TTC3-206ENST00000414818 MAPK8IP2Q13387 824 aaPredicted RBP14.02□□□□□ -0.17
TTC3-206ENST00000414818 DMRT2Q9Y5R5 561 aa13.9□□□□□ -0.18
TTC3-206ENST00000414818 CNKSR2Q8WXI2 1034 aa13.76□□□□□ -0.21
TTC3-206ENST00000414818 NCBP3Q53F19 620 aaKnown RBP13.68□□□□□ -0.22
TTC3-206ENST00000414818 CACNB1Q02641 598 aaPredicted RBP13.64□□□□□ -0.23
TTC3-206ENST00000414818 HOXD11P31277 338 aaPredicted RBP13.55□□□□□ -0.24
TTC3-206ENST00000414818 RNF216Q9NWF9 866 aaPredicted RBP13.54□□□□□ -0.24
TTC3-206ENST00000414818 KCNA4P22459 653 aa13.5□□□□□ -0.25
TTC3-206ENST00000414818 NPM3O75607 178 aaKnown RBP13.45□□□□□ -0.26
TTC3-206ENST00000414818 DCAF8L1A6NGE4 600 aa13.26□□□□□ -0.29
TTC3-206ENST00000414818 DNAJC5BQ9UF47 199 aa13.17□□□□□ -0.3
TTC3-206ENST00000414818 RNF39Q9H2S5 420 aa13.05□□□□□ -0.32
TTC3-206ENST00000414818 C1QBPQ07021 282 aaKnown RBP12.87□□□□□ -0.35
TTC3-206ENST00000414818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.87□□□□□ -0.354e-7■■□□□ 14.3
TTC3-206ENST00000414818 SLC4A1APQ9BWU0 796 aaKnown RBP12.83□□□□□ -0.36
TTC3-206ENST00000414818 SLC4A2P04920 1241 aa12.75□□□□□ -0.37
TTC3-206ENST00000414818 U3KPZ7 1027 aaPredicted RBP12.65□□□□□ -0.38
TTC3-206ENST00000414818 POTEHQ6S545 545 aa12.53□□□□□ -0.4
TTC3-206ENST00000414818 FOXD4L1Q9NU39 408 aa12.51□□□□□ -0.41
TTC3-206ENST00000414818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.46□□□□□ -0.41
TTC3-206ENST00000414818 HNRNPUL2Q1KMD3 747 aaKnown RBP12.46□□□□□ -0.41
TTC3-206ENST00000414818 MYCNP04198 464 aaPredicted RBP12.45□□□□□ -0.42
TTC3-206ENST00000414818 ZBTB22O15209 634 aa12.41□□□□□ -0.42
TTC3-206ENST00000414818 SAMD1Q6SPF0 538 aaPredicted RBP12.39□□□□□ -0.43
TTC3-206ENST00000414818 APLP2Q06481 763 aa12.38□□□□□ -0.43
TTC3-206ENST00000414818 SPINK5Q9NQ38 1064 aaPredicted RBP12.34□□□□□ -0.43
TTC3-206ENST00000414818 CAPN15O75808 1086 aa12.3□□□□□ -0.44
TTC3-206ENST00000414818 ZNF219Q9P2Y4 722 aaPredicted RBP12.22□□□□□ -0.45
TTC3-206ENST00000414818 TRHP20396 242 aaPredicted RBP12.19□□□□□ -0.46
TTC3-206ENST00000414818 CSRNP3Q8WYN3 585 aa12.19□□□□□ -0.46
TTC3-206ENST00000414818 DSG3P32926 999 aa12.17□□□□□ -0.46
TTC3-206ENST00000414818 EHMT2Q96KQ7 1210 aa12.17□□□□□ -0.46
TTC3-206ENST00000414818 ATXN8OSP0DMR3 200 aa12.13□□□□□ -0.47
TTC3-206ENST00000414818 ATF5Q9Y2D1 282 aaPredicted RBP12.1□□□□□ -0.47
TTC3-206ENST00000414818 ABCB7O75027 752 aa12.03□□□□□ -0.48
TTC3-206ENST00000414818 POLA2Q14181 598 aa11.97□□□□□ -0.49
TTC3-206ENST00000414818 ZBTB12Q9Y330 459 aaPredicted RBP11.78□□□□□ -0.52
TTC3-206ENST00000414818 FBLN2P98095 1184 aa11.63□□□□□ -0.55
TTC3-206ENST00000414818 RBM42Q9BTD8 480 aaKnown RBP11.62□□□□□ -0.55
TTC3-206ENST00000414818 MKRN4PQ13434 485 aaPredicted RBP11.57□□□□□ -0.56
TTC3-206ENST00000414818 OSCARQ8IYS5 282 aa11.54□□□□□ -0.56
TTC3-206ENST00000414818 CHRDL2Q6WN34 429 aa11.51□□□□□ -0.57
TTC3-206ENST00000414818 SP7Q8TDD2 431 aaPredicted RBP11.45□□□□□ -0.58
TTC3-206ENST00000414818 SPDYE2BA6NHP3 402 aa11.44□□□□□ -0.58
TTC3-206ENST00000414818 SPDYE6P0CI01 402 aa11.44□□□□□ -0.58
TTC3-206ENST00000414818 SPDYE2Q495Y8 402 aa11.44□□□□□ -0.58
TTC3-206ENST00000414818 AKT1S1Q96B36 256 aa11.43□□□□□ -0.58
TTC3-206ENST00000414818 ZNF692Q9BU19 519 aaPredicted RBP11.35□□□□□ -0.59
TTC3-206ENST00000414818 SSUH2Q9Y2M2 353 aa11.32□□□□□ -0.6
TTC3-206ENST00000414818 REM2Q8IYK8 340 aaPredicted RBP11.3□□□□□ -0.6
TTC3-206ENST00000414818 SPDYE4A6NLX3 237 aa11.22□□□□□ -0.61
TTC3-206ENST00000414818 PABPN1Q86U42 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
TTC3-206ENST00000414818 PITPNM1O00562 1244 aa11.16□□□□□ -0.62
TTC3-206ENST00000414818 SPDYE1Q8NFV5 336 aaPredicted RBP11.15□□□□□ -0.62
TTC3-206ENST00000414818 HAX1O00165 279 aa11.09□□□□□ -0.63
TTC3-206ENST00000414818 CLEC11AQ9Y240 323 aa11.08□□□□□ -0.64
TTC3-206ENST00000414818 PIP4P2Q8N4L2 257 aa11.06□□□□□ -0.64
TTC3-206ENST00000414818 PROM2Q8N271 834 aa11.03□□□□□ -0.64
TTC3-206ENST00000414818 FXR2P51116 673 aaKnown RBP eCLIP11.02□□□□□ -0.653e-10■■■■□ 24.5
TTC3-206ENST00000414818 FKBP8Q14318 412 aa11.01□□□□□ -0.65
TTC3-206ENST00000414818 STAG3Q9UJ98 1225 aa11□□□□□ -0.65
TTC3-206ENST00000414818 PRR29P0C7W0 189 aa10.97□□□□□ -0.65
TTC3-206ENST00000414818 PRKAR2AP13861 404 aaKnown RBP10.89□□□□□ -0.67
TTC3-206ENST00000414818 CHADLQ6NUI6 762 aa10.82□□□□□ -0.68
TTC3-206ENST00000414818 CREBZFQ9NS37 354 aa10.78□□□□□ -0.68
TTC3-206ENST00000414818 EVX2Q03828 476 aa10.76□□□□□ -0.69
TTC3-206ENST00000414818 FBXO3Q9UK99 471 aa10.73□□□□□ -0.69
TTC3-206ENST00000414818 FARP1Q9Y4F1 1045 aaPredicted RBP10.73□□□□□ -0.69
TTC3-206ENST00000414818 LHX8Q68G74 356 aa10.72□□□□□ -0.69
TTC3-206ENST00000414818 MIER1Q8N108 512 aa10.66□□□□□ -0.7
TTC3-206ENST00000414818 C19orf67A6NJJ6 358 aa10.65□□□□□ -0.7
TTC3-206ENST00000414818 MNX1P50219 401 aaPredicted RBP10.65□□□□□ -0.7
TTC3-206ENST00000414818 PLEKHG5O94827 1062 aa10.64□□□□□ -0.71
TTC3-206ENST00000414818 PLSCR2Q9NRY7 297 aa10.63□□□□□ -0.71
TTC3-206ENST00000414818 NPM1P06748 294 aaKnown RBP eCLIP10.62□□□□□ -0.71
TTC3-206ENST00000414818 PLCD3Q8N3E9 789 aa10.62□□□□□ -0.71
TTC3-206ENST00000414818 GABBR2O75899 941 aa10.57□□□□□ -0.72
TTC3-206ENST00000414818 CD44P16070 742 aaKnown RBP10.56□□□□□ -0.72
TTC3-206ENST00000414818 VASPP50552 380 aaPredicted RBP10.55□□□□□ -0.72
TTC3-206ENST00000414818 ZBTB47Q9UFB7 747 aaPredicted RBP10.55□□□□□ -0.72
TTC3-206ENST00000414818 PAK3O75914 559 aaPredicted RBP10.48□□□□□ -0.73
TTC3-206ENST00000414818 ZRANB1Q9UGI0 708 aa10.47□□□□□ -0.73
TTC3-206ENST00000414818 CLCN6P51797 869 aa10.43□□□□□ -0.74
TTC3-206ENST00000414818 ZNF579Q8NAF0 562 aaKnown RBP10.43□□□□□ -0.74
TTC3-206ENST00000414818 NUBP1P53384 320 aa10.42□□□□□ -0.74
TTC3-206ENST00000414818 KLHL34Q8N239 644 aa10.41□□□□□ -0.74
TTC3-206ENST00000414818 IFNLR1Q8IU57 520 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms