RNA–Protein interactions for RNA: ENST00000409321.5

PTMA-203, Transcript of prothymosin alpha, humanhuman

TSL 3 BASIC

Gene PTMA, Length 735 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-203ENST00000409321 NISCHQ9Y2I1 1504 aa24.81■■□□□ 1.56
PTMA-203ENST00000409321 AEBP2Q6ZN18 517 aaPredicted RBP22.53■■□□□ 1.2
PTMA-203ENST00000409321 CCDC180Q9P1Z9 1646 aa21.89■■□□□ 1.09
PTMA-203ENST00000409321 CHIC1Q5VXU3 224 aa21.29■■□□□ 1
PTMA-203ENST00000409321 ABCC9O60706 1549 aa21.15■□□□□ 0.98
PTMA-203ENST00000409321 ZCCHC6Q5VYS8 1495 aaKnown RBP20.71■□□□□ 0.91
PTMA-203ENST00000409321 DCAF8L2P0C7V8 631 aa20.58■□□□□ 0.89
PTMA-203ENST00000409321 DCAF1Q9Y4B6 1507 aa20.55■□□□□ 0.88
PTMA-203ENST00000409321 NACADO15069 1562 aa20.54■□□□□ 0.88
PTMA-203ENST00000409321 MYO15BQ96JP2 1530 aa20.53■□□□□ 0.88
PTMA-203ENST00000409321 RB1CC1Q8TDY2 1594 aa20.46■□□□□ 0.87
PTMA-203ENST00000409321 UNC13AQ9UPW8 1703 aa20.03■□□□□ 0.8
PTMA-203ENST00000409321 SCRIBQ14160 1630 aa19.98■□□□□ 0.79
PTMA-203ENST00000409321 BICRAQ9NZM4 1560 aa19.89■□□□□ 0.77
PTMA-203ENST00000409321 PABPN1Q86U42 306 aaKnown RBP eCLIP19.85■□□□□ 0.77
PTMA-203ENST00000409321 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
PTMA-203ENST00000409321 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.72
PTMA-203ENST00000409321 SENP3Q9H4L4 574 aaPredicted RBP19.33■□□□□ 0.68
PTMA-203ENST00000409321 CECR2Q9BXF3 1484 aa19.31■□□□□ 0.68
PTMA-203ENST00000409321 EIF4G1Q04637 1599 aaKnown RBP19.31■□□□□ 0.68
PTMA-203ENST00000409321 BAZ1AQ9NRL2 1556 aaPredicted RBP19.17■□□□□ 0.66
PTMA-203ENST00000409321 SMARCA4P51532 1647 aa19.17■□□□□ 0.66
PTMA-203ENST00000409321 CC2D2AQ9P2K1 1620 aa19.16■□□□□ 0.66
PTMA-203ENST00000409321 MROH2BQ7Z745 1585 aa19.13■□□□□ 0.65
PTMA-203ENST00000409321 RSF1Q96T23 1441 aaPredicted RBP19.03■□□□□ 0.64
PTMA-203ENST00000409321 PHF23Q9BUL5 403 aaPredicted RBP19.02■□□□□ 0.64
PTMA-203ENST00000409321 ATAD2BQ9ULI0 1458 aa19.02■□□□□ 0.63
PTMA-203ENST00000409321 PEG3Q9GZU2 1588 aa19■□□□□ 0.63
PTMA-203ENST00000409321 NCAPD3P42695 1498 aa18.98■□□□□ 0.63
PTMA-203ENST00000409321 SMARCA2P51531 1590 aa18.98■□□□□ 0.63
PTMA-203ENST00000409321 WIZO95785 1651 aa18.92■□□□□ 0.62
PTMA-203ENST00000409321 HMGXB3Q12766 1538 aa18.87■□□□□ 0.61
PTMA-203ENST00000409321 BAZ1BQ9UIG0 1483 aaKnown RBP18.84■□□□□ 0.61
PTMA-203ENST00000409321 SUPT5HO00267 1087 aaKnown RBP18.73■□□□□ 0.59
PTMA-203ENST00000409321 TOP2AP11388 1531 aaKnown RBP18.72■□□□□ 0.59
PTMA-203ENST00000409321 CCDC88BA6NC98 1476 aa18.54■□□□□ 0.56
PTMA-203ENST00000409321 CADPSQ9ULU8 1353 aa18.43■□□□□ 0.54
PTMA-203ENST00000409321 NESP48681 1621 aa18.41■□□□□ 0.54
PTMA-203ENST00000409321 CFTRP13569 1480 aa18.39■□□□□ 0.53
PTMA-203ENST00000409321 DNAJC5Q9H3Z4 198 aa18.38■□□□□ 0.53
PTMA-203ENST00000409321 LAMC3Q9Y6N6 1575 aa18.38■□□□□ 0.53
PTMA-203ENST00000409321 PDS5BQ9NTI5 1447 aa18.26■□□□□ 0.51
PTMA-203ENST00000409321 PRDM2Q13029 1718 aa18.22■□□□□ 0.51
PTMA-203ENST00000409321 FANCD2Q9BXW9 1451 aa18.19■□□□□ 0.5
PTMA-203ENST00000409321 ERCC6Q03468 1493 aa18.17■□□□□ 0.5
PTMA-203ENST00000409321 KIF21AQ7Z4S6 1674 aa18.17■□□□□ 0.5
PTMA-203ENST00000409321 CEP164Q9UPV0 1460 aa18.12■□□□□ 0.49
PTMA-203ENST00000409321 MRC2Q9UBG0 1479 aa18.05■□□□□ 0.48
PTMA-203ENST00000409321 THOC2Q8NI27 1593 aaKnown RBP18.04■□□□□ 0.48
PTMA-203ENST00000409321 URB2Q14146 1524 aaKnown RBP18.01■□□□□ 0.47
PTMA-203ENST00000409321 WDR62O43379 1518 aa17.99■□□□□ 0.47
PTMA-203ENST00000409321 FOXD1Q16676 465 aa17.99■□□□□ 0.47
PTMA-203ENST00000409321 ABCC8Q09428 1581 aa17.95■□□□□ 0.46
PTMA-203ENST00000409321 TOPBP1Q92547 1522 aa17.94■□□□□ 0.46
PTMA-203ENST00000409321 DNMBPQ6XZF7 1577 aa17.93■□□□□ 0.46
PTMA-203ENST00000409321 CUX1P39880 1505 aa17.93■□□□□ 0.46
PTMA-203ENST00000409321 CUX2O14529 1486 aa17.91■□□□□ 0.46
PTMA-203ENST00000409321 WRNQ14191 1432 aaPredicted RBP eCLIP17.89■□□□□ 0.46
PTMA-203ENST00000409321 SYNJ1O43426 1573 aa17.83■□□□□ 0.45
PTMA-203ENST00000409321 TOP2BQ02880 1626 aa17.83■□□□□ 0.44
PTMA-203ENST00000409321 BIVM-ERCC5R4GMW8 1640 aa17.82■□□□□ 0.44
PTMA-203ENST00000409321 POLA1P09884 1462 aaPredicted RBP17.81■□□□□ 0.44
PTMA-203ENST00000409321 FGD5Q6ZNL6 1462 aa17.8■□□□□ 0.44
PTMA-203ENST00000409321 SOGA1O94964 1423 aa17.75■□□□□ 0.43
PTMA-203ENST00000409321 IFT140Q96RY7 1462 aa17.75■□□□□ 0.43
PTMA-203ENST00000409321 RAD54L2Q9Y4B4 1467 aa17.74■□□□□ 0.43
PTMA-203ENST00000409321 TARBP1Q13395 1621 aaKnown RBP17.73■□□□□ 0.43
PTMA-203ENST00000409321 TRIM41Q8WV44 630 aa17.68■□□□□ 0.42
PTMA-203ENST00000409321 ZNF608Q9ULD9 1512 aaPredicted RBP17.67■□□□□ 0.42
PTMA-203ENST00000409321 ABCA10Q8WWZ4 1543 aa17.66■□□□□ 0.42
PTMA-203ENST00000409321 WDR97A6NE52 1622 aa17.63■□□□□ 0.41
PTMA-203ENST00000409321 TDRD9Q8NDG6 1382 aaKnown RBP17.62■□□□□ 0.41
PTMA-203ENST00000409321 AQRO60306 1485 aaKnown RBP eCLIP17.61■□□□□ 0.414e-20■■■■■ 37.2
PTMA-203ENST00000409321 EIF4G3O43432 1585 aaKnown RBP17.56■□□□□ 0.4
PTMA-203ENST00000409321 ABCA5Q8WWZ7 1642 aa17.54■□□□□ 0.4
PTMA-203ENST00000409321 GAPVD1Q14C86 1478 aa17.54■□□□□ 0.4
PTMA-203ENST00000409321 KIF27Q86VH2 1401 aa17.5■□□□□ 0.39
PTMA-203ENST00000409321 GRIN2BQ13224 1484 aa17.49■□□□□ 0.39
PTMA-203ENST00000409321 RUSC2Q8N2Y8 1516 aa17.47■□□□□ 0.39
PTMA-203ENST00000409321 IGF1RP08069 1367 aa17.45■□□□□ 0.38
PTMA-203ENST00000409321 PBRM1Q86U86 1689 aa17.45■□□□□ 0.38
PTMA-203ENST00000409321 ERICH3Q5RHP9 1530 aa17.44■□□□□ 0.38
PTMA-203ENST00000409321 SNAPC4Q5SXM2 1469 aa17.42■□□□□ 0.38
PTMA-203ENST00000409321 MAGI1Q96QZ7 1491 aaPredicted RBP17.41■□□□□ 0.38
PTMA-203ENST00000409321 FHAD1B1AJZ9 1412 aa17.35■□□□□ 0.37
PTMA-203ENST00000409321 EEA1Q15075 1411 aa17.35■□□□□ 0.37
PTMA-203ENST00000409321 SYNJ2O15056 1496 aa17.35■□□□□ 0.37
PTMA-203ENST00000409321 ADAMTS12P58397 1594 aa17.34■□□□□ 0.37
PTMA-203ENST00000409321 CARMIL1Q5VZK9 1371 aa17.32■□□□□ 0.36
PTMA-203ENST00000409321 CSRNP3Q8WYN3 585 aa17.32■□□□□ 0.36
PTMA-203ENST00000409321 CHMP7Q8WUX9 453 aaPredicted RBP17.31■□□□□ 0.36
PTMA-203ENST00000409321 CUL7Q14999 1698 aa17.3■□□□□ 0.36
PTMA-203ENST00000409321 CHD1O14646 1710 aa17.3■□□□□ 0.36
PTMA-203ENST00000409321 FBLN2P98095 1184 aa17.29■□□□□ 0.36
PTMA-203ENST00000409321 FAM9AQ8IZU1 332 aaPredicted RBP17.29■□□□□ 0.36
PTMA-203ENST00000409321 PRXQ9BXM0 1461 aa17.27■□□□□ 0.36
PTMA-203ENST00000409321 GRIN2AQ12879 1464 aa17.26■□□□□ 0.35
PTMA-203ENST00000409321 OSCARQ8IYS5 282 aa17.26■□□□□ 0.35
PTMA-203ENST00000409321 RAPGEF2Q9Y4G8 1499 aa17.23■□□□□ 0.35
PTMA-203ENST00000409321 NUP160Q12769 1436 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms