RNA–Protein interactions for RNA: ENST00000482150.2

KLF3-202, Transcript of Kruppel like factor 3, humanhuman

TSL 2

Gene KLF3, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-202ENST00000482150 NISCHQ9Y2I1 1504 aa35.11■■■■□ 3.21
KLF3-202ENST00000482150 CCDC180Q9P1Z9 1646 aa31.26■■■□□ 2.59
KLF3-202ENST00000482150 ABCC9O60706 1549 aa30.84■■■□□ 2.53
KLF3-202ENST00000482150 RB1CC1Q8TDY2 1594 aa29.54■■■□□ 2.32
KLF3-202ENST00000482150 NACADO15069 1562 aa29.47■■■□□ 2.31
KLF3-202ENST00000482150 DCAF8L2P0C7V8 631 aa29.4■■■□□ 2.3
KLF3-202ENST00000482150 MYO15BQ96JP2 1530 aa29.23■■■□□ 2.27
KLF3-202ENST00000482150 ZCCHC6Q5VYS8 1495 aaKnown RBP29.21■■■□□ 2.27
KLF3-202ENST00000482150 DCAF1Q9Y4B6 1507 aa29.03■■■□□ 2.24
KLF3-202ENST00000482150 UNC13AQ9UPW8 1703 aa28.86■■■□□ 2.21
KLF3-202ENST00000482150 PABPN1Q86U42 306 aaKnown RBP eCLIP28.8■■■□□ 2.2
KLF3-202ENST00000482150 BICRAQ9NZM4 1560 aa28.71■■■□□ 2.19
KLF3-202ENST00000482150 DNAJC5BQ9UF47 199 aa28.56■■■□□ 2.16
KLF3-202ENST00000482150 SCRIBQ14160 1630 aa28.53■■■□□ 2.16
KLF3-202ENST00000482150 SHROOM4Q9ULL8 1493 aa28.34■■■□□ 2.13
KLF3-202ENST00000482150 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
KLF3-202ENST00000482150 CC2D2AQ9P2K1 1620 aa27.88■■■□□ 2.05
KLF3-202ENST00000482150 CECR2Q9BXF3 1484 aa27.73■■■□□ 2.03
KLF3-202ENST00000482150 SMARCA4P51532 1647 aa27.27■■□□□ 1.96
KLF3-202ENST00000482150 NCAPD3P42695 1498 aa27.22■■□□□ 1.95
KLF3-202ENST00000482150 ATAD2BQ9ULI0 1458 aa27.2■■□□□ 1.95
KLF3-202ENST00000482150 BAZ1AQ9NRL2 1556 aaPredicted RBP27.2■■□□□ 1.94
KLF3-202ENST00000482150 SMARCA2P51531 1590 aa27.13■■□□□ 1.93
KLF3-202ENST00000482150 MROH2BQ7Z745 1585 aa27.06■■□□□ 1.92
KLF3-202ENST00000482150 HMGXB3Q12766 1538 aa27.05■■□□□ 1.92
KLF3-202ENST00000482150 PEG3Q9GZU2 1588 aa27.02■■□□□ 1.92
KLF3-202ENST00000482150 BAZ1BQ9UIG0 1483 aaKnown RBP26.94■■□□□ 1.9
KLF3-202ENST00000482150 WIZO95785 1651 aa26.74■■□□□ 1.87
KLF3-202ENST00000482150 RSF1Q96T23 1441 aaPredicted RBP26.68■■□□□ 1.86
KLF3-202ENST00000482150 NESP48681 1621 aa26.64■■□□□ 1.85
KLF3-202ENST00000482150 ERCC6Q03468 1493 aa26.57■■□□□ 1.84
KLF3-202ENST00000482150 LAMC3Q9Y6N6 1575 aa26.5■■□□□ 1.83
KLF3-202ENST00000482150 TOP2AP11388 1531 aaKnown RBP26.44■■□□□ 1.82
KLF3-202ENST00000482150 CADPSQ9ULU8 1353 aa26.41■■□□□ 1.82
KLF3-202ENST00000482150 CUX2O14529 1486 aa26.38■■□□□ 1.81
KLF3-202ENST00000482150 PDS5BQ9NTI5 1447 aa26.34■■□□□ 1.81
KLF3-202ENST00000482150 KIF21AQ7Z4S6 1674 aa26.28■■□□□ 1.8
KLF3-202ENST00000482150 THOC2Q8NI27 1593 aaKnown RBP26.27■■□□□ 1.8
KLF3-202ENST00000482150 CFTRP13569 1480 aa26.22■■□□□ 1.79
KLF3-202ENST00000482150 CCDC88BA6NC98 1476 aa26.15■■□□□ 1.78
KLF3-202ENST00000482150 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
KLF3-202ENST00000482150 MRC2Q9UBG0 1479 aa26.09■■□□□ 1.77
KLF3-202ENST00000482150 CEP164Q9UPV0 1460 aa26.08■■□□□ 1.77
KLF3-202ENST00000482150 WDR62O43379 1518 aa26.02■■□□□ 1.76
KLF3-202ENST00000482150 PRDM2Q13029 1718 aa25.92■■□□□ 1.74
KLF3-202ENST00000482150 URB2Q14146 1524 aaKnown RBP25.87■■□□□ 1.73
KLF3-202ENST00000482150 DNAJC5Q9H3Z4 198 aa25.85■■□□□ 1.73
KLF3-202ENST00000482150 SUPT5HO00267 1087 aaKnown RBP25.82■■□□□ 1.72
KLF3-202ENST00000482150 TOPBP1Q92547 1522 aa25.66■■□□□ 1.7
KLF3-202ENST00000482150 ABCC8Q09428 1581 aa25.61■■□□□ 1.69
KLF3-202ENST00000482150 DNMBPQ6XZF7 1577 aa25.6■■□□□ 1.69
KLF3-202ENST00000482150 IFT140Q96RY7 1462 aa25.53■■□□□ 1.68
KLF3-202ENST00000482150 ZNF608Q9ULD9 1512 aaPredicted RBP25.47■■□□□ 1.67
KLF3-202ENST00000482150 POLA1P09884 1462 aaPredicted RBP25.44■■□□□ 1.66
KLF3-202ENST00000482150 CUX1P39880 1505 aa25.4■■□□□ 1.66
KLF3-202ENST00000482150 TARBP1Q13395 1621 aaKnown RBP25.4■■□□□ 1.66
KLF3-202ENST00000482150 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
KLF3-202ENST00000482150 RAD54L2Q9Y4B4 1467 aa25.34■■□□□ 1.65
KLF3-202ENST00000482150 EIF4G3O43432 1585 aaKnown RBP25.33■■□□□ 1.65
KLF3-202ENST00000482150 SOGA1O94964 1423 aa25.31■■□□□ 1.64
KLF3-202ENST00000482150 AQRO60306 1485 aaKnown RBP eCLIP25.3■■□□□ 1.642e-13■■■■■ 50.5
KLF3-202ENST00000482150 OSCARQ8IYS5 282 aa25.25■■□□□ 1.63
KLF3-202ENST00000482150 TDRD9Q8NDG6 1382 aaKnown RBP25.21■■□□□ 1.63
KLF3-202ENST00000482150 WDR97A6NE52 1622 aa25.15■■□□□ 1.62
KLF3-202ENST00000482150 WRNQ14191 1432 aaPredicted RBP eCLIP25.14■■□□□ 1.621e-6■■■■■ 58.5
KLF3-202ENST00000482150 TOP2BQ02880 1626 aa25.1■■□□□ 1.61
KLF3-202ENST00000482150 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
KLF3-202ENST00000482150 BIVM-ERCC5R4GMW8 1640 aa25.09■■□□□ 1.61
KLF3-202ENST00000482150 ABCA10Q8WWZ4 1543 aa25.08■■□□□ 1.61
KLF3-202ENST00000482150 GRIN2BQ13224 1484 aa25.04■■□□□ 1.6
KLF3-202ENST00000482150 SNAPC4Q5SXM2 1469 aa25.04■■□□□ 1.6
KLF3-202ENST00000482150 CHD1O14646 1710 aa25.03■■□□□ 1.6
KLF3-202ENST00000482150 GAPVD1Q14C86 1478 aa25.02■■□□□ 1.6
KLF3-202ENST00000482150 FBLN2P98095 1184 aa25.01■■□□□ 1.59
KLF3-202ENST00000482150 ABCA5Q8WWZ7 1642 aa24.99■■□□□ 1.59
KLF3-202ENST00000482150 MAGI1Q96QZ7 1491 aaPredicted RBP24.99■■□□□ 1.59
KLF3-202ENST00000482150 PBRM1Q86U86 1689 aa24.94■■□□□ 1.58
KLF3-202ENST00000482150 SYNJ2O15056 1496 aa24.91■■□□□ 1.58
KLF3-202ENST00000482150 CHMP7Q8WUX9 453 aaPredicted RBP24.91■■□□□ 1.58
KLF3-202ENST00000482150 TRIM41Q8WV44 630 aa24.89■■□□□ 1.58
KLF3-202ENST00000482150 RIMBP3CA6NJZ7 1639 aa24.86■■□□□ 1.57
KLF3-202ENST00000482150 RIMBP3BA6NNM3 1639 aa24.86■■□□□ 1.57
KLF3-202ENST00000482150 RIMBP3Q9UFD9 1639 aa24.86■■□□□ 1.57
KLF3-202ENST00000482150 ARHGEF11O15085 1522 aa24.86■■□□□ 1.57
KLF3-202ENST00000482150 CLASP1Q7Z460 1538 aa24.8■■□□□ 1.56
KLF3-202ENST00000482150 ERICH3Q5RHP9 1530 aa24.76■■□□□ 1.55
KLF3-202ENST00000482150 ADAMTS12P58397 1594 aa24.76■■□□□ 1.55
KLF3-202ENST00000482150 GRIN2AQ12879 1464 aa24.73■■□□□ 1.55
KLF3-202ENST00000482150 FHAD1B1AJZ9 1412 aa24.72■■□□□ 1.55
KLF3-202ENST00000482150 ARAP1Q96P48 1450 aa24.65■■□□□ 1.54
KLF3-202ENST00000482150 NUP160Q12769 1436 aa24.64■■□□□ 1.54
KLF3-202ENST00000482150 CYB5RLQ6IPT4 315 aa24.64■■□□□ 1.54
KLF3-202ENST00000482150 KIF27Q86VH2 1401 aa24.62■■□□□ 1.53
KLF3-202ENST00000482150 CEP170Q5SW79 1584 aa24.62■■□□□ 1.53
KLF3-202ENST00000482150 IGF1RP08069 1367 aa24.58■■□□□ 1.53
KLF3-202ENST00000482150 CUL7Q14999 1698 aa24.47■■□□□ 1.51
KLF3-202ENST00000482150 SHROOM2Q13796 1616 aa24.46■■□□□ 1.51
KLF3-202ENST00000482150 ERCC6L2Q5T890 1561 aa24.46■■□□□ 1.51
KLF3-202ENST00000482150 CARMIL1Q5VZK9 1371 aa24.42■■□□□ 1.5
KLF3-202ENST00000482150 RUSC2Q8N2Y8 1516 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms