RNA–Protein interactions for RNA: ENST00000467816.1

PTMA-210, Transcript of prothymosin alpha, humanhuman

TSL 2

Gene PTMA, Length 378 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-210ENST00000467816 NISCHQ9Y2I1 1504 aa32.04■■■□□ 2.72
PTMA-210ENST00000467816 CCDC180Q9P1Z9 1646 aa28.32■■■□□ 2.12
PTMA-210ENST00000467816 ABCC9O60706 1549 aa27.07■■□□□ 1.92
PTMA-210ENST00000467816 ZCCHC6Q5VYS8 1495 aaKnown RBP26.79■■□□□ 1.88
PTMA-210ENST00000467816 DCAF1Q9Y4B6 1507 aa26.6■■□□□ 1.85
PTMA-210ENST00000467816 MYO15BQ96JP2 1530 aa26.53■■□□□ 1.84
PTMA-210ENST00000467816 NACADO15069 1562 aa26.47■■□□□ 1.83
PTMA-210ENST00000467816 DCAF8L2P0C7V8 631 aa26.42■■□□□ 1.82
PTMA-210ENST00000467816 RB1CC1Q8TDY2 1594 aa26.36■■□□□ 1.81
PTMA-210ENST00000467816 UNC13AQ9UPW8 1703 aa25.83■■□□□ 1.73
PTMA-210ENST00000467816 SCRIBQ14160 1630 aa25.75■■□□□ 1.71
PTMA-210ENST00000467816 BICRAQ9NZM4 1560 aa25.55■■□□□ 1.68
PTMA-210ENST00000467816 SHROOM4Q9ULL8 1493 aa25.46■■□□□ 1.67
PTMA-210ENST00000467816 PABPN1Q86U42 306 aaKnown RBP eCLIP25.35■■□□□ 1.65
PTMA-210ENST00000467816 CECR2Q9BXF3 1484 aa24.84■■□□□ 1.57
PTMA-210ENST00000467816 EIF4G1Q04637 1599 aaKnown RBP24.81■■□□□ 1.56
PTMA-210ENST00000467816 BAZ1AQ9NRL2 1556 aaPredicted RBP24.8■■□□□ 1.56
PTMA-210ENST00000467816 SMARCA4P51532 1647 aa24.75■■□□□ 1.55
PTMA-210ENST00000467816 MROH2BQ7Z745 1585 aa24.67■■□□□ 1.54
PTMA-210ENST00000467816 CC2D2AQ9P2K1 1620 aa24.57■■□□□ 1.52
PTMA-210ENST00000467816 RSF1Q96T23 1441 aaPredicted RBP24.57■■□□□ 1.52
PTMA-210ENST00000467816 PEG3Q9GZU2 1588 aa24.55■■□□□ 1.52
PTMA-210ENST00000467816 SMARCA2P51531 1590 aa24.49■■□□□ 1.51
PTMA-210ENST00000467816 ATAD2BQ9ULI0 1458 aa24.46■■□□□ 1.51
PTMA-210ENST00000467816 WIZO95785 1651 aa24.44■■□□□ 1.5
PTMA-210ENST00000467816 NCAPD3P42695 1498 aa24.41■■□□□ 1.5
PTMA-210ENST00000467816 DNAJC5BQ9UF47 199 aa24.39■■□□□ 1.49
PTMA-210ENST00000467816 HMGXB3Q12766 1538 aa24.34■■□□□ 1.49
PTMA-210ENST00000467816 BAZ1BQ9UIG0 1483 aaKnown RBP24.27■■□□□ 1.48
PTMA-210ENST00000467816 SUPT5HO00267 1087 aaKnown RBP24.24■■□□□ 1.47
PTMA-210ENST00000467816 TOP2AP11388 1531 aaKnown RBP24.21■■□□□ 1.47
PTMA-210ENST00000467816 CCDC88BA6NC98 1476 aa23.92■■□□□ 1.42
PTMA-210ENST00000467816 LAMC3Q9Y6N6 1575 aa23.69■■□□□ 1.38
PTMA-210ENST00000467816 CADPSQ9ULU8 1353 aa23.69■■□□□ 1.38
PTMA-210ENST00000467816 CFTRP13569 1480 aa23.68■■□□□ 1.38
PTMA-210ENST00000467816 PRDM2Q13029 1718 aa23.64■■□□□ 1.37
PTMA-210ENST00000467816 NESP48681 1621 aa23.59■■□□□ 1.37
PTMA-210ENST00000467816 PDS5BQ9NTI5 1447 aa23.48■■□□□ 1.35
PTMA-210ENST00000467816 FANCD2Q9BXW9 1451 aa23.4■■□□□ 1.34
PTMA-210ENST00000467816 KIF21AQ7Z4S6 1674 aa23.4■■□□□ 1.34
PTMA-210ENST00000467816 CEP164Q9UPV0 1460 aa23.32■■□□□ 1.32
PTMA-210ENST00000467816 ERCC6Q03468 1493 aa23.28■■□□□ 1.32
PTMA-210ENST00000467816 ABCC8Q09428 1581 aa23.18■■□□□ 1.3
PTMA-210ENST00000467816 THOC2Q8NI27 1593 aaKnown RBP23.18■■□□□ 1.3
PTMA-210ENST00000467816 MRC2Q9UBG0 1479 aa23.18■■□□□ 1.3
PTMA-210ENST00000467816 WRNQ14191 1432 aaPredicted RBP eCLIP23.14■■□□□ 1.29
PTMA-210ENST00000467816 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.29
PTMA-210ENST00000467816 URB2Q14146 1524 aaKnown RBP23.13■■□□□ 1.29
PTMA-210ENST00000467816 WDR62O43379 1518 aa23.12■■□□□ 1.29
PTMA-210ENST00000467816 CUX1P39880 1505 aa23.11■■□□□ 1.29
PTMA-210ENST00000467816 BIVM-ERCC5R4GMW8 1640 aa23.11■■□□□ 1.29
PTMA-210ENST00000467816 TOPBP1Q92547 1522 aa23.1■■□□□ 1.29
PTMA-210ENST00000467816 TOP2BQ02880 1626 aa23.08■■□□□ 1.29
PTMA-210ENST00000467816 SYNJ1O43426 1573 aa23.06■■□□□ 1.28
PTMA-210ENST00000467816 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
PTMA-210ENST00000467816 CUX2O14529 1486 aa22.93■■□□□ 1.26
PTMA-210ENST00000467816 POLA1P09884 1462 aaPredicted RBP22.93■■□□□ 1.26
PTMA-210ENST00000467816 FGD5Q6ZNL6 1462 aa22.93■■□□□ 1.26
PTMA-210ENST00000467816 TRIM41Q8WV44 630 aa22.92■■□□□ 1.26
PTMA-210ENST00000467816 TARBP1Q13395 1621 aaKnown RBP22.85■■□□□ 1.25
PTMA-210ENST00000467816 SOGA1O94964 1423 aa22.84■■□□□ 1.25
PTMA-210ENST00000467816 IFT140Q96RY7 1462 aa22.83■■□□□ 1.25
PTMA-210ENST00000467816 WDR97A6NE52 1622 aa22.8■■□□□ 1.24
PTMA-210ENST00000467816 RAD54L2Q9Y4B4 1467 aa22.79■■□□□ 1.24
PTMA-210ENST00000467816 ABCA10Q8WWZ4 1543 aa22.77■■□□□ 1.24
PTMA-210ENST00000467816 ABCA5Q8WWZ7 1642 aa22.65■■□□□ 1.22
PTMA-210ENST00000467816 ZNF608Q9ULD9 1512 aaPredicted RBP22.64■■□□□ 1.21
PTMA-210ENST00000467816 KIF27Q86VH2 1401 aa22.63■■□□□ 1.21
PTMA-210ENST00000467816 EIF4G3O43432 1585 aaKnown RBP22.61■■□□□ 1.21
PTMA-210ENST00000467816 TDRD9Q8NDG6 1382 aaKnown RBP22.61■■□□□ 1.21
PTMA-210ENST00000467816 GAPVD1Q14C86 1478 aa22.6■■□□□ 1.21
PTMA-210ENST00000467816 AQRO60306 1485 aaKnown RBP eCLIP22.59■■□□□ 1.215e-27■■■■■ 70
PTMA-210ENST00000467816 EEA1Q15075 1411 aa22.57■■□□□ 1.2
PTMA-210ENST00000467816 PBRM1Q86U86 1689 aa22.56■■□□□ 1.2
PTMA-210ENST00000467816 RUSC2Q8N2Y8 1516 aa22.56■■□□□ 1.2
PTMA-210ENST00000467816 ERICH3Q5RHP9 1530 aa22.53■■□□□ 1.2
PTMA-210ENST00000467816 GRIN2BQ13224 1484 aa22.52■■□□□ 1.2
PTMA-210ENST00000467816 IGF1RP08069 1367 aa22.48■■□□□ 1.19
PTMA-210ENST00000467816 CUL7Q14999 1698 aa22.43■■□□□ 1.18
PTMA-210ENST00000467816 CSRNP3Q8WYN3 585 aa22.43■■□□□ 1.18
PTMA-210ENST00000467816 MAGI1Q96QZ7 1491 aaPredicted RBP22.42■■□□□ 1.18
PTMA-210ENST00000467816 SNAPC4Q5SXM2 1469 aa22.39■■□□□ 1.17
PTMA-210ENST00000467816 ADAMTS12P58397 1594 aa22.37■■□□□ 1.17
PTMA-210ENST00000467816 FHAD1B1AJZ9 1412 aa22.35■■□□□ 1.17
PTMA-210ENST00000467816 FAM9AQ8IZU1 332 aaPredicted RBP22.35■■□□□ 1.17
PTMA-210ENST00000467816 CARMIL1Q5VZK9 1371 aa22.35■■□□□ 1.17
PTMA-210ENST00000467816 PRXQ9BXM0 1461 aa22.34■■□□□ 1.17
PTMA-210ENST00000467816 SYNJ2O15056 1496 aa22.32■■□□□ 1.16
PTMA-210ENST00000467816 KIF21BO75037 1637 aa22.3■■□□□ 1.16
PTMA-210ENST00000467816 RAPGEF2Q9Y4G8 1499 aa22.28■■□□□ 1.16
PTMA-210ENST00000467816 CHD1O14646 1710 aa22.26■■□□□ 1.15
PTMA-210ENST00000467816 GRIN2AQ12879 1464 aa22.23■■□□□ 1.15
PTMA-210ENST00000467816 CHMP7Q8WUX9 453 aaPredicted RBP22.23■■□□□ 1.15
PTMA-210ENST00000467816 GOLGA3Q08378 1498 aa22.16■■□□□ 1.14
PTMA-210ENST00000467816 FBLN2P98095 1184 aa22.15■■□□□ 1.14
PTMA-210ENST00000467816 NUP160Q12769 1436 aa22.13■■□□□ 1.13
PTMA-210ENST00000467816 CEP170Q5SW79 1584 aa22.1■■□□□ 1.13
PTMA-210ENST00000467816 CTTNBP2Q8WZ74 1663 aa22.1■■□□□ 1.13
PTMA-210ENST00000467816 OSCARQ8IYS5 282 aa22.05■■□□□ 1.12
PTMA-210ENST00000467816 KIAA0586Q9BVV6 1533 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms