RNA–Protein interactions for RNA: ENST00000491200.5

HNRNPH3-211, Transcript of heterogeneous nuclear ribonucleoprotein H3, human

TSL 1 (best)

Gene HNRNPH3, Length 2,308 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPH3-211	ENST00000491200	NISCH	Q9Y2I1	1504 aa		29.23	■■■□□ 2.27
HNRNPH3-211	ENST00000491200	SHROOM4	Q9ULL8	1493 aa		25.16	■■□□□ 1.62
HNRNPH3-211	ENST00000491200	ZCCHC6	Q5VYS8	1495 aa	Known RBP	24.73	■■□□□ 1.55
HNRNPH3-211	ENST00000491200	SUPT5H	O00267	1087 aa	Known RBP	24.69	■■□□□ 1.54
HNRNPH3-211	ENST00000491200	CCDC180	Q9P1Z9	1646 aa		24.69	■■□□□ 1.54
HNRNPH3-211	ENST00000491200	DCAF8L2	P0C7V8	631 aa		24.34	■■□□□ 1.49
HNRNPH3-211	ENST00000491200	CHIC1	Q5VXU3	224 aa		24.05	■■□□□ 1.44
HNRNPH3-211	ENST00000491200	MYO15B	Q96JP2	1530 aa		24.03	■■□□□ 1.44
HNRNPH3-211	ENST00000491200	DCAF1	Q9Y4B6	1507 aa		23.89	■■□□□ 1.42
HNRNPH3-211	ENST00000491200	HRC	P23327	699 aa		23.45	■■□□□ 1.34
HNRNPH3-211	ENST00000491200	LOC105371045	A0A1W2PR82	267 aa		23.42	■■□□□ 1.34
HNRNPH3-211	ENST00000491200	PCGF6	Q9BYE7	350 aa		23.42	■■□□□ 1.34
HNRNPH3-211	ENST00000491200	ABCC9	O60706	1549 aa		23.34	■■□□□ 1.33
HNRNPH3-211	ENST00000491200	SCRIB	Q14160	1630 aa		23.31	■■□□□ 1.32
HNRNPH3-211	ENST00000491200	RSF1	Q96T23	1441 aa	Predicted RBP	23.23	■■□□□ 1.31
HNRNPH3-211	ENST00000491200	PPARGC1B	Q86YN6	1023 aa	Known RBP	23.09	■■□□□ 1.29
HNRNPH3-211	ENST00000491200	RB1CC1	Q8TDY2	1594 aa		23	■■□□□ 1.27
HNRNPH3-211	ENST00000491200	TRIM41	Q8WV44	630 aa		22.92	■■□□□ 1.26
HNRNPH3-211	ENST00000491200	CECR2	Q9BXF3	1484 aa		22.9	■■□□□ 1.26
HNRNPH3-211	ENST00000491200	TRIM26	Q12899	539 aa	Predicted RBP	22.86	■■□□□ 1.25
HNRNPH3-211	ENST00000491200	FAM9A	Q8IZU1	332 aa	Predicted RBP	22.85	■■□□□ 1.25
HNRNPH3-211	ENST00000491200	NACAD	O15069	1562 aa		22.83	■■□□□ 1.24
HNRNPH3-211	ENST00000491200	MROH2B	Q7Z745	1585 aa		22.8	■■□□□ 1.24
HNRNPH3-211	ENST00000491200	EHMT2	Q96KQ7	1210 aa		22.71	■■□□□ 1.23
HNRNPH3-211	ENST00000491200	WIZ	O95785	1651 aa		22.68	■■□□□ 1.22
HNRNPH3-211	ENST00000491200	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	22.45	■■□□□ 1.18
HNRNPH3-211	ENST00000491200	EIF4G1	Q04637	1599 aa	Known RBP	22.38	■■□□□ 1.17
HNRNPH3-211	ENST00000491200	ZEB1	P37275	1124 aa	Predicted RBP	22.3	■■□□□ 1.16
HNRNPH3-211	ENST00000491200	TOP2A	P11388	1531 aa	Known RBP	22.24	■■□□□ 1.15
HNRNPH3-211	ENST00000491200	ABCC8	Q09428	1581 aa		22.24	■■□□□ 1.15
HNRNPH3-211	ENST00000491200	SMARCA4	P51532	1647 aa		22.23	■■□□□ 1.15
HNRNPH3-211	ENST00000491200	CCDC88B	A6NC98	1476 aa		22.23	■■□□□ 1.15
HNRNPH3-211	ENST00000491200	UNC13A	Q9UPW8	1703 aa		22.2	■■□□□ 1.15
HNRNPH3-211	ENST00000491200	SMARCA2	P51531	1590 aa		22.17	■■□□□ 1.14
HNRNPH3-211	ENST00000491200	SOGA1	O94964	1423 aa		22.07	■■□□□ 1.12
HNRNPH3-211	ENST00000491200	PABPN1	Q86U42	306 aa	Known RBP eCLIP	22.06	■■□□□ 1.12	1e-7	■□□□□ 8.9
HNRNPH3-211	ENST00000491200	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	22.03	■■□□□ 1.12
HNRNPH3-211	ENST00000491200	PELP1	Q8IZL8	1130 aa	Known RBP	22.02	■■□□□ 1.12
HNRNPH3-211	ENST00000491200	RUSC2	Q8N2Y8	1516 aa		21.99	■■□□□ 1.11
HNRNPH3-211	ENST00000491200	TTBK1	Q5TCY1	1321 aa	Predicted RBP	21.98	■■□□□ 1.11
HNRNPH3-211	ENST00000491200	BICRA	Q9NZM4	1560 aa		21.95	■■□□□ 1.1
HNRNPH3-211	ENST00000491200	CEP162	Q5TB80	1403 aa		21.94	■■□□□ 1.1
HNRNPH3-211	ENST00000491200	WRN	Q14191	1432 aa	Predicted RBP eCLIP	21.9	■■□□□ 1.1
HNRNPH3-211	ENST00000491200	CCER1	Q8TC90	406 aa	Predicted RBP	21.89	■■□□□ 1.1
HNRNPH3-211	ENST00000491200	CSRNP3	Q8WYN3	585 aa		21.89	■■□□□ 1.1
HNRNPH3-211	ENST00000491200	TNIK	Q9UKE5	1360 aa		21.88	■■□□□ 1.09
HNRNPH3-211	ENST00000491200	UBTF	P17480	764 aa	Known RBP	21.83	■■□□□ 1.08
HNRNPH3-211	ENST00000491200	EEA1	Q15075	1411 aa		21.78	■■□□□ 1.08
HNRNPH3-211	ENST00000491200	PEG3	Q9GZU2	1588 aa		21.75	■■□□□ 1.07
HNRNPH3-211	ENST00000491200	SCAF1	Q9H7N4	1312 aa	Known RBP	21.73	■■□□□ 1.07
HNRNPH3-211	ENST00000491200	SYNJ1	O43426	1573 aa		21.7	■■□□□ 1.06
HNRNPH3-211	ENST00000491200	GOLGA3	Q08378	1498 aa		21.7	■■□□□ 1.06
HNRNPH3-211	ENST00000491200	ATAD2B	Q9ULI0	1458 aa		21.66	■■□□□ 1.06
HNRNPH3-211	ENST00000491200	BAZ1B	Q9UIG0	1483 aa	Known RBP	21.58	■■□□□ 1.04
HNRNPH3-211	ENST00000491200	CEP164	Q9UPV0	1460 aa		21.56	■■□□□ 1.04
HNRNPH3-211	ENST00000491200	DIEXF	Q68CQ4	756 aa	Known RBP	21.53	■■□□□ 1.04
HNRNPH3-211	ENST00000491200	KIF21B	O75037	1637 aa		21.53	■■□□□ 1.04
HNRNPH3-211	ENST00000491200	CLIP1	P30622	1438 aa		21.5	■■□□□ 1.03
HNRNPH3-211	ENST00000491200	RAPGEF2	Q9Y4G8	1499 aa		21.49	■■□□□ 1.03
HNRNPH3-211	ENST00000491200	RANGAP1	P46060	587 aa	Predicted RBP	21.47	■■□□□ 1.03
HNRNPH3-211	ENST00000491200	HNRNPUL2	Q1KMD3	747 aa	Known RBP	21.46	■■□□□ 1.03
HNRNPH3-211	ENST00000491200	NEUROD1	Q13562	356 aa		21.46	■■□□□ 1.03
HNRNPH3-211	ENST00000491200	ACIN1	Q9UKV3	1341 aa	Known RBP	21.42	■■□□□ 1.02
HNRNPH3-211	ENST00000491200	VPS8	Q8N3P4	1428 aa		21.4	■■□□□ 1.02
HNRNPH3-211	ENST00000491200	TOP2B	Q02880	1626 aa		21.36	■■□□□ 1.01
HNRNPH3-211	ENST00000491200	ZNF316	A6NFI3	1004 aa	Predicted RBP	21.34	■■□□□ 1.01
HNRNPH3-211	ENST00000491200	MYT1	Q01538	1121 aa		21.27	■■□□□ 1
HNRNPH3-211	ENST00000491200	BIVM-ERCC5	R4GMW8	1640 aa		21.27	■■□□□ 1
HNRNPH3-211	ENST00000491200	APLP2	Q06481	763 aa		21.27	■□□□□ 0.99
HNRNPH3-211	ENST00000491200	PRX	Q9BXM0	1461 aa		21.22	■□□□□ 0.99
HNRNPH3-211	ENST00000491200	GTF3C3	Q9Y5Q9	886 aa		21.21	■□□□□ 0.99
HNRNPH3-211	ENST00000491200	CUX1	P39880	1505 aa		21.2	■□□□□ 0.98
HNRNPH3-211	ENST00000491200	NCAPD3	P42695	1498 aa		21.18	■□□□□ 0.98
HNRNPH3-211	ENST00000491200	ARAP1	Q96P48	1450 aa		21.18	■□□□□ 0.98
HNRNPH3-211	ENST00000491200	CENPB	P07199	599 aa	Predicted RBP	21.17	■□□□□ 0.98
HNRNPH3-211	ENST00000491200	KANK4	Q5T7N3	995 aa	Predicted RBP	21.16	■□□□□ 0.98
HNRNPH3-211	ENST00000491200	ERICH3	Q5RHP9	1530 aa		21.15	■□□□□ 0.98
HNRNPH3-211	ENST00000491200	HMGXB3	Q12766	1538 aa		21.14	■□□□□ 0.97
HNRNPH3-211	ENST00000491200	MIER1	Q8N108	512 aa		21.13	■□□□□ 0.97
HNRNPH3-211	ENST00000491200	YTHDC1	Q96MU7	727 aa	Known RBP	21.09	■□□□□ 0.97
HNRNPH3-211	ENST00000491200	CFTR	P13569	1480 aa		21.06	■□□□□ 0.96
HNRNPH3-211	ENST00000491200	KIF27	Q86VH2	1401 aa		21.05	■□□□□ 0.96
HNRNPH3-211	ENST00000491200	DHX57	Q6P158	1386 aa	Known RBP	21.01	■□□□□ 0.95
HNRNPH3-211	ENST00000491200	ARHGAP35	Q9NRY4	1499 aa		20.98	■□□□□ 0.95
HNRNPH3-211	ENST00000491200	RRBP1	Q9P2E9	1410 aa	Known RBP	20.92	■□□□□ 0.94
HNRNPH3-211	ENST00000491200	IGF1R	P08069	1367 aa		20.9	■□□□□ 0.94
HNRNPH3-211	ENST00000491200	CUX2	O14529	1486 aa		20.89	■□□□□ 0.93
HNRNPH3-211	ENST00000491200	CLSPN	Q9HAW4	1339 aa		20.87	■□□□□ 0.93
HNRNPH3-211	ENST00000491200	ITGAE	P38570	1179 aa		20.86	■□□□□ 0.93
HNRNPH3-211	ENST00000491200	CCNB3	Q8WWL7	1395 aa		20.84	■□□□□ 0.93
HNRNPH3-211	ENST00000491200	CADPS	Q9ULU8	1353 aa		20.81	■□□□□ 0.92
HNRNPH3-211	ENST00000491200	PRDM2	Q13029	1718 aa		20.8	■□□□□ 0.92
HNRNPH3-211	ENST00000491200	FGD5	Q6ZNL6	1462 aa		20.79	■□□□□ 0.92
HNRNPH3-211	ENST00000491200	CARMIL1	Q5VZK9	1371 aa		20.78	■□□□□ 0.92
HNRNPH3-211	ENST00000491200	TIAM1	Q13009	1591 aa		20.71	■□□□□ 0.91
HNRNPH3-211	ENST00000491200	P3H3	Q8IVL6	736 aa		20.71	■□□□□ 0.91
HNRNPH3-211	ENST00000491200	RAB3GAP2	Q9H2M9	1393 aa		20.7	■□□□□ 0.9
HNRNPH3-211	ENST00000491200	PHLDB1	Q86UU1	1377 aa		20.68	■□□□□ 0.9
HNRNPH3-211	ENST00000491200	LRRC9	Q6ZRR7	1453 aa		20.65	■□□□□ 0.9
HNRNPH3-211	ENST00000491200	MAPKBP1	O60336	1514 aa		20.65	■□□□□ 0.9

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