RNA–Protein interactions for RNA: ENST00000503368.5

UBE2K-204, Transcript of ubiquitin conjugating enzyme E2 K, humanhuman

TSL 1 (best) BASIC

Gene UBE2K, Length 891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2K-204ENST00000503368 NISCHQ9Y2I1 1504 aa48.78■■■■■ 5.4
UBE2K-204ENST00000503368 ABCC9O60706 1549 aa44.39■■■■■ 4.7
UBE2K-204ENST00000503368 CCDC180Q9P1Z9 1646 aa43.94■■■■■ 4.62
UBE2K-204ENST00000503368 DNAJC5BQ9UF47 199 aa42.14■■■■■ 4.34
UBE2K-204ENST00000503368 RB1CC1Q8TDY2 1594 aa42.07■■■■■ 4.33
UBE2K-204ENST00000503368 NACADO15069 1562 aa41.7■■■■■ 4.27
UBE2K-204ENST00000503368 DCAF8L2P0C7V8 631 aa41.36■■■■■ 4.21
UBE2K-204ENST00000503368 PABPN1Q86U42 306 aaKnown RBP eCLIP41.28■■■■■ 4.2
UBE2K-204ENST00000503368 UNC13AQ9UPW8 1703 aa41.06■■■■■ 4.16
UBE2K-204ENST00000503368 MYO15BQ96JP2 1530 aa41.03■■■■■ 4.16
UBE2K-204ENST00000503368 BICRAQ9NZM4 1560 aa40.87■■■■■ 4.13
UBE2K-204ENST00000503368 SHROOM4Q9ULL8 1493 aa40.32■■■■■ 4.05
UBE2K-204ENST00000503368 DCAF1Q9Y4B6 1507 aa40.31■■■■■ 4.04
UBE2K-204ENST00000503368 ZCCHC6Q5VYS8 1495 aaKnown RBP40.3■■■■■ 4.04
UBE2K-204ENST00000503368 CC2D2AQ9P2K1 1620 aa40.09■■■■■ 4.01
UBE2K-204ENST00000503368 CECR2Q9BXF3 1484 aa40.07■■■■■ 4.01
UBE2K-204ENST00000503368 SCRIBQ14160 1630 aa39.94■■■■□ 3.99
UBE2K-204ENST00000503368 EIF4G1Q04637 1599 aaKnown RBP39.89■■■■□ 3.98
UBE2K-204ENST00000503368 DNAJC5Q9H3Z4 198 aa39.1■■■■□ 3.85
UBE2K-204ENST00000503368 NCAPD3P42695 1498 aa38.54■■■■□ 3.76
UBE2K-204ENST00000503368 CUX2O14529 1486 aa38.52■■■■□ 3.76
UBE2K-204ENST00000503368 ERCC6Q03468 1493 aa38.37■■■■□ 3.73
UBE2K-204ENST00000503368 ATAD2BQ9ULI0 1458 aa38.31■■■■□ 3.72
UBE2K-204ENST00000503368 SMARCA2P51531 1590 aa38.18■■■■□ 3.7
UBE2K-204ENST00000503368 HMGXB3Q12766 1538 aa38.16■■■■□ 3.7
UBE2K-204ENST00000503368 SMARCA4P51532 1647 aa38.11■■■■□ 3.69
UBE2K-204ENST00000503368 NESP48681 1621 aa38■■■■□ 3.67
UBE2K-204ENST00000503368 BAZ1BQ9UIG0 1483 aaKnown RBP37.89■■■■□ 3.66
UBE2K-204ENST00000503368 BAZ1AQ9NRL2 1556 aaPredicted RBP37.88■■■■□ 3.65
UBE2K-204ENST00000503368 PEG3Q9GZU2 1588 aa37.8■■■■□ 3.64
UBE2K-204ENST00000503368 LAMC3Q9Y6N6 1575 aa37.7■■■■□ 3.63
UBE2K-204ENST00000503368 THOC2Q8NI27 1593 aaKnown RBP37.69■■■■□ 3.62
UBE2K-204ENST00000503368 MROH2BQ7Z745 1585 aa37.55■■■■□ 3.6
UBE2K-204ENST00000503368 PDS5BQ9NTI5 1447 aa37.53■■■■□ 3.6
UBE2K-204ENST00000503368 KIF21AQ7Z4S6 1674 aa37.45■■■■□ 3.59
UBE2K-204ENST00000503368 CADPSQ9ULU8 1353 aa37.33■■■■□ 3.57
UBE2K-204ENST00000503368 MRC2Q9UBG0 1479 aa37.19■■■■□ 3.54
UBE2K-204ENST00000503368 WDR62O43379 1518 aa37.11■■■■□ 3.53
UBE2K-204ENST00000503368 TRIM41Q8WV44 630 aa37.08■■■■□ 3.53
UBE2K-204ENST00000503368 WIZO95785 1651 aa37.04■■■■□ 3.52
UBE2K-204ENST00000503368 CEP164Q9UPV0 1460 aa36.94■■■■□ 3.5
UBE2K-204ENST00000503368 FANCD2Q9BXW9 1451 aa36.87■■■■□ 3.49
UBE2K-204ENST00000503368 CFTRP13569 1480 aa36.81■■■■□ 3.48
UBE2K-204ENST00000503368 OSCARQ8IYS5 282 aa36.73■■■■□ 3.47
UBE2K-204ENST00000503368 RSF1Q96T23 1441 aaPredicted RBP36.73■■■■□ 3.47
UBE2K-204ENST00000503368 URB2Q14146 1524 aaKnown RBP36.59■■■■□ 3.45
UBE2K-204ENST00000503368 TOP2AP11388 1531 aaKnown RBP36.56■■■■□ 3.44
UBE2K-204ENST00000503368 PRDM2Q13029 1718 aa36.29■■■■□ 3.4
UBE2K-204ENST00000503368 IFT140Q96RY7 1462 aa36.24■■■■□ 3.39
UBE2K-204ENST00000503368 ZNF608Q9ULD9 1512 aaPredicted RBP36.2■■■■□ 3.39
UBE2K-204ENST00000503368 CCDC88BA6NC98 1476 aa36.19■■■■□ 3.38
UBE2K-204ENST00000503368 RIMBP3CA6NJZ7 1639 aa36.19■■■■□ 3.38
UBE2K-204ENST00000503368 RIMBP3BA6NNM3 1639 aa36.19■■■■□ 3.38
UBE2K-204ENST00000503368 RIMBP3Q9UFD9 1639 aa36.19■■■■□ 3.38
UBE2K-204ENST00000503368 TOPBP1Q92547 1522 aa36.11■■■■□ 3.37
UBE2K-204ENST00000503368 ABCC8Q09428 1581 aa36.06■■■■□ 3.36
UBE2K-204ENST00000503368 ARHGEF11O15085 1522 aa36.05■■■■□ 3.36
UBE2K-204ENST00000503368 EIF4G3O43432 1585 aaKnown RBP35.94■■■■□ 3.34
UBE2K-204ENST00000503368 DNMBPQ6XZF7 1577 aa35.92■■■■□ 3.34
UBE2K-204ENST00000503368 CYB5RLQ6IPT4 315 aa35.86■■■■□ 3.33
UBE2K-204ENST00000503368 AQRO60306 1485 aaKnown RBP eCLIP35.84■■■■□ 3.334e-6■■■■■ 31
UBE2K-204ENST00000503368 TARBP1Q13395 1621 aaKnown RBP35.83■■■■□ 3.33
UBE2K-204ENST00000503368 CHD1O14646 1710 aa35.74■■■■□ 3.31
UBE2K-204ENST00000503368 POLA1P09884 1462 aaPredicted RBP35.71■■■■□ 3.31
UBE2K-204ENST00000503368 FBLN2P98095 1184 aa35.69■■■■□ 3.3
UBE2K-204ENST00000503368 ARAP1Q96P48 1450 aa35.67■■■■□ 3.3
UBE2K-204ENST00000503368 TRHP20396 242 aaPredicted RBP35.59■■■■□ 3.29
UBE2K-204ENST00000503368 SOGA1O94964 1423 aa35.57■■■■□ 3.29
UBE2K-204ENST00000503368 RAD54L2Q9Y4B4 1467 aa35.57■■■■□ 3.28
UBE2K-204ENST00000503368 TDRD9Q8NDG6 1382 aaKnown RBP35.55■■■■□ 3.28
UBE2K-204ENST00000503368 SUPT5HO00267 1087 aaKnown RBP35.55■■■■□ 3.28
UBE2K-204ENST00000503368 WDR97A6NE52 1622 aa35.46■■■■□ 3.27
UBE2K-204ENST00000503368 SNAPC4Q5SXM2 1469 aa35.42■■■■□ 3.26
UBE2K-204ENST00000503368 FGD5Q6ZNL6 1462 aa35.41■■■■□ 3.26
UBE2K-204ENST00000503368 CHMP7Q8WUX9 453 aaPredicted RBP35.4■■■■□ 3.26
UBE2K-204ENST00000503368 CLASP1Q7Z460 1538 aa35.38■■■■□ 3.25
UBE2K-204ENST00000503368 MAGI1Q96QZ7 1491 aaPredicted RBP35.36■■■■□ 3.25
UBE2K-204ENST00000503368 SYNJ1O43426 1573 aa35.32■■■■□ 3.24
UBE2K-204ENST00000503368 GRIN2BQ13224 1484 aa35.31■■■■□ 3.24
UBE2K-204ENST00000503368 CUX1P39880 1505 aa35.3■■■■□ 3.24
UBE2K-204ENST00000503368 SYNJ2O15056 1496 aa35.25■■■■□ 3.23
UBE2K-204ENST00000503368 GAPVD1Q14C86 1478 aa35.12■■■■□ 3.21
UBE2K-204ENST00000503368 PBRM1Q86U86 1689 aa35.05■■■■□ 3.2
UBE2K-204ENST00000503368 ABCA10Q8WWZ4 1543 aa35.01■■■■□ 3.2
UBE2K-204ENST00000503368 ABCA5Q8WWZ7 1642 aa34.95■■■■□ 3.19
UBE2K-204ENST00000503368 AEBP2Q6ZN18 517 aaPredicted RBP34.91■■■■□ 3.18
UBE2K-204ENST00000503368 GRIN2AQ12879 1464 aa34.84■■■■□ 3.17
UBE2K-204ENST00000503368 WRNQ14191 1432 aaPredicted RBP eCLIP34.8■■■■□ 3.16
UBE2K-204ENST00000503368 NUP160Q12769 1436 aa34.77■■■■□ 3.16
UBE2K-204ENST00000503368 ERCC6L2Q5T890 1561 aa34.77■■■■□ 3.16
UBE2K-204ENST00000503368 ADAMTS12P58397 1594 aa34.71■■■■□ 3.15
UBE2K-204ENST00000503368 CEP170Q5SW79 1584 aa34.71■■■■□ 3.15
UBE2K-204ENST00000503368 FHAD1B1AJZ9 1412 aa34.66■■■■□ 3.14
UBE2K-204ENST00000503368 SHROOM2Q13796 1616 aa34.63■■■■□ 3.13
UBE2K-204ENST00000503368 TOP2BQ02880 1626 aa34.62■■■■□ 3.13
UBE2K-204ENST00000503368 BIVM-ERCC5R4GMW8 1640 aa34.6■■■■□ 3.13
UBE2K-204ENST00000503368 ERICH3Q5RHP9 1530 aa34.56■■■■□ 3.12
UBE2K-204ENST00000503368 PRG4Q92954 1404 aaPredicted RBP34.46■■■■□ 3.11
UBE2K-204ENST00000503368 JPH4Q96JJ6 628 aa34.45■■■■□ 3.11
UBE2K-204ENST00000503368 KIF13AQ9H1H9 1805 aa34.39■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 351.6 ms